RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 ZNF428Q96B54 188 aa22.45■■□□□ 1.18
LMNA-205ENST00000368299 RGPD8O14715 1765 aaPredicted RBP22.45■■□□□ 1.18
LMNA-205ENST00000368299 EIF4A2Q14240 407 aaKnown RBP22.45■■□□□ 1.18
LMNA-205ENST00000368299 BCL2L13Q9BXK5 485 aa22.45■■□□□ 1.18
LMNA-205ENST00000368299 SMC4Q9NTJ3 1288 aa22.43■■□□□ 1.18
LMNA-205ENST00000368299 GNAI1P63096 354 aa22.42■■□□□ 1.18
LMNA-205ENST00000368299 IFT57Q9NWB7 429 aa22.42■■□□□ 1.18
LMNA-205ENST00000368299 DNAJC5Q9H3Z4 198 aa22.42■■□□□ 1.18
LMNA-205ENST00000368299 ALDH1L2Q3SY69 923 aa22.41■■□□□ 1.18
LMNA-205ENST00000368299 SBNO1A3KN83 1393 aa22.4■■□□□ 1.18
LMNA-205ENST00000368299 SSH1Q8WYL5 1049 aa22.4■■□□□ 1.18
LMNA-205ENST00000368299 FLT4P35916 1363 aa22.4■■□□□ 1.18
LMNA-205ENST00000368299 PEAK1Q9H792 1746 aa22.4■■□□□ 1.18
LMNA-205ENST00000368299 PDE4AP27815 886 aa22.4■■□□□ 1.18
LMNA-205ENST00000368299 NPHP4O75161 1426 aaPredicted RBP22.39■■□□□ 1.18
LMNA-205ENST00000368299 KIF16BQ96L93 1317 aa22.39■■□□□ 1.18
LMNA-205ENST00000368299 RLBP1P12271 317 aa22.39■■□□□ 1.17
LMNA-205ENST00000368299 FTSJ3Q8IY81 847 aaKnown RBP22.39■■□□□ 1.17
LMNA-205ENST00000368299 DZIP1LQ8IYY4 767 aaKnown RBP22.39■■□□□ 1.17
LMNA-205ENST00000368299 PIK3C2AO00443 1686 aa22.39■■□□□ 1.17
LMNA-205ENST00000368299 SULT6B1Q6IMI4 303 aa22.38■■□□□ 1.17
LMNA-205ENST00000368299 BACH2Q9BYV9 841 aa22.38■■□□□ 1.17
LMNA-205ENST00000368299 MAP3K19Q56UN5 1328 aa22.38■■□□□ 1.17
LMNA-205ENST00000368299 MVPQ14764 893 aaKnown RBP22.38■■□□□ 1.17
LMNA-205ENST00000368299 HSP90AB2PQ58FF8 381 aa22.38■■□□□ 1.17
LMNA-205ENST00000368299 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
LMNA-205ENST00000368299 RGPD1P0DJD0 1748 aa22.37■■□□□ 1.17
LMNA-205ENST00000368299 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
LMNA-205ENST00000368299 ZNF853P0CG23 659 aa22.37■■□□□ 1.17
LMNA-205ENST00000368299 NOP58Q9Y2X3 529 aaKnown RBP22.37■■□□□ 1.17
LMNA-205ENST00000368299 ADGRL3Q9HAR2 1447 aa22.37■■□□□ 1.17
LMNA-205ENST00000368299 ARHGEF10O15013 1369 aa22.37■■□□□ 1.17
LMNA-205ENST00000368299 USP54Q70EL1 1684 aa22.36■■□□□ 1.17
LMNA-205ENST00000368299 BRPF1P55201 1214 aaPredicted RBP22.36■■□□□ 1.17
LMNA-205ENST00000368299 CFAP44Q96MT7 982 aa22.36■■□□□ 1.17
LMNA-205ENST00000368299 LAS1LQ9Y4W2 734 aaKnown RBP22.36■■□□□ 1.17
LMNA-205ENST00000368299 NLRP6P59044 892 aa22.36■■□□□ 1.17
LMNA-205ENST00000368299 ATF7IPQ6VMQ6 1270 aa22.36■■□□□ 1.17
LMNA-205ENST00000368299 ANP32AP39687 249 aaKnown RBP22.35■■□□□ 1.17
LMNA-205ENST00000368299 DLG5Q8TDM6 1919 aa22.35■■□□□ 1.17
LMNA-205ENST00000368299 PHF8Q9UPP1 1060 aa22.34■■□□□ 1.17
LMNA-205ENST00000368299 TRIM27P14373 513 aa22.34■■□□□ 1.17
LMNA-205ENST00000368299 AEBP1Q8IUX7 1158 aa22.34■■□□□ 1.17
LMNA-205ENST00000368299 TNNQ9UQP3 1299 aa22.34■■□□□ 1.17
LMNA-205ENST00000368299 SOX12O15370 315 aa22.33■■□□□ 1.17
LMNA-205ENST00000368299 IGHDP01880 384 aa22.33■■□□□ 1.17
LMNA-205ENST00000368299 THUMPD2Q9BTF0 503 aaKnown RBP22.33■■□□□ 1.17
LMNA-205ENST00000368299 AMPHP49418 695 aa22.33■■□□□ 1.16
LMNA-205ENST00000368299 NOB1Q9ULX3 412 aaKnown RBP22.32■■□□□ 1.16
LMNA-205ENST00000368299 MBIPQ9NS73 344 aa22.32■■□□□ 1.16
LMNA-205ENST00000368299 DDX19BQ9UMR2 479 aa22.32■■□□□ 1.16
LMNA-205ENST00000368299 ABTB2Q8N961 1025 aa22.31■■□□□ 1.16
LMNA-205ENST00000368299 VAMP4O75379 141 aa22.3■■□□□ 1.16
LMNA-205ENST00000368299 SKAP1Q86WV1 359 aa22.3■■□□□ 1.16
LMNA-205ENST00000368299 KDRP35968 1356 aa22.3■■□□□ 1.16
LMNA-205ENST00000368299 IPO9Q96P70 1041 aaKnown RBP22.29■■□□□ 1.16
LMNA-205ENST00000368299 RWDD1Q9H446 243 aaPredicted RBP22.29■■□□□ 1.16
LMNA-205ENST00000368299 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
LMNA-205ENST00000368299 PCDHB15Q9Y5E8 787 aa22.28■■□□□ 1.16
LMNA-205ENST00000368299 IGSF1Q8N6C5 1336 aa22.28■■□□□ 1.16
LMNA-205ENST00000368299 ARHGAP45Q92619 1136 aa22.28■■□□□ 1.16
LMNA-205ENST00000368299 MARF1Q9Y4F3 1742 aaKnown RBP22.27■■□□□ 1.16
LMNA-205ENST00000368299 FAM83GA6ND36 823 aa22.27■■□□□ 1.16
LMNA-205ENST00000368299 PAK3O75914 559 aaPredicted RBP22.27■■□□□ 1.16
LMNA-205ENST00000368299 HAP1P54257 671 aaPredicted RBP22.27■■□□□ 1.16
LMNA-205ENST00000368299 RTL1A6NKG5 1358 aa22.26■■□□□ 1.15
LMNA-205ENST00000368299 TWISTNBQ3B726 338 aaPredicted RBP22.26■■□□□ 1.15
LMNA-205ENST00000368299 FAM161AQ3B820 660 aa22.26■■□□□ 1.15
LMNA-205ENST00000368299 ITPRIPQ8IWB1 547 aa22.26■■□□□ 1.15
LMNA-205ENST00000368299 HOXC9P31274 260 aa22.25■■□□□ 1.15
LMNA-205ENST00000368299 RGS3P49796 1198 aa22.24■■□□□ 1.15
LMNA-205ENST00000368299 C14orf37Q86TY3 774 aa22.24■■□□□ 1.15
LMNA-205ENST00000368299 DCTN1Q14203 1278 aa22.24■■□□□ 1.15
LMNA-205ENST00000368299 ESCO1Q5FWF5 840 aa22.24■■□□□ 1.15
LMNA-205ENST00000368299 MRPL50Q8N5N7 158 aaKnown RBP22.24■■□□□ 1.15
LMNA-205ENST00000368299 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
LMNA-205ENST00000368299 EYA1Q99502 592 aa22.24■■□□□ 1.15
LMNA-205ENST00000368299 PSME1Q06323 249 aa22.23■■□□□ 1.15
LMNA-205ENST00000368299 NUTM2GQ5VZR2 741 aa22.23■■□□□ 1.15
LMNA-205ENST00000368299 RBM33Q96EV2 1170 aaKnown RBP22.23■■□□□ 1.15
LMNA-205ENST00000368299 CHMP4BQ9H444 224 aaKnown RBP22.23■■□□□ 1.15
LMNA-205ENST00000368299 CHL1O00533 1208 aa22.22■■□□□ 1.15
LMNA-205ENST00000368299 TMEM57Q8N5G2 664 aa22.22■■□□□ 1.15
LMNA-205ENST00000368299 GAS2L2Q8NHY3 880 aa22.22■■□□□ 1.15
LMNA-205ENST00000368299 BCL11AQ9H165 835 aa22.22■■□□□ 1.15
LMNA-205ENST00000368299 C8orf58Q8NAV2 365 aa22.2■■□□□ 1.15
LMNA-205ENST00000368299 KIAA0232Q92628 1395 aa22.2■■□□□ 1.14
LMNA-205ENST00000368299 RTF1Q92541 710 aaKnown RBP22.2■■□□□ 1.14
LMNA-205ENST00000368299 HDAC1Q13547 482 aaPredicted RBP22.19■■□□□ 1.14
LMNA-205ENST00000368299 KCNH5Q8NCM2 988 aa22.19■■□□□ 1.14
LMNA-205ENST00000368299 ZBTB40Q9NUA8 1239 aa22.19■■□□□ 1.14
LMNA-205ENST00000368299 HTATSF1O43719 755 aaKnown RBP22.19■■□□□ 1.14
LMNA-205ENST00000368299 MTHFSDQ2M296 383 aaKnown RBP22.19■■□□□ 1.14
LMNA-205ENST00000368299 MCM10Q7L590 875 aa22.19■■□□□ 1.14
LMNA-205ENST00000368299 ZBTB47Q9UFB7 747 aaPredicted RBP22.18■■□□□ 1.14
LMNA-205ENST00000368299 ELL2O00472 640 aaPredicted RBP22.18■■□□□ 1.14
LMNA-205ENST00000368299 C8orf34Q49A92 452 aa22.18■■□□□ 1.14
LMNA-205ENST00000368299 CRB1P82279 1406 aa22.17■■□□□ 1.14
LMNA-205ENST00000368299 PROSER2Q86WR7 435 aaPredicted RBP22.17■■□□□ 1.14
LMNA-205ENST00000368299 NFAT5O94916 1531 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms