RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ZNF692Q9BU19 519 aaPredicted RBP17.99■□□□□ 0.47
CD48-201ENST00000368045 CCDC61Q9Y6R9 512 aa17.99■□□□□ 0.47
CD48-201ENST00000368045 CPS1P31327 1500 aa17.99■□□□□ 0.47
CD48-201ENST00000368045 METP08581 1390 aa17.99■□□□□ 0.47
CD48-201ENST00000368045 NUDT16Q96DE0 195 aaKnown RBP17.99■□□□□ 0.47
CD48-201ENST00000368045 EMILIN1Q9Y6C2 1016 aa17.99■□□□□ 0.47
CD48-201ENST00000368045 KIF24Q5T7B8 1368 aa17.98■□□□□ 0.47
CD48-201ENST00000368045 NME9Q86XW9 330 aa17.98■□□□□ 0.47
CD48-201ENST00000368045 SLKQ9H2G2 1235 aaPredicted RBP17.98■□□□□ 0.47
CD48-201ENST00000368045 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
CD48-201ENST00000368045 ZBTB7BO15156 539 aaPredicted RBP17.97■□□□□ 0.47
CD48-201ENST00000368045 HMOX1P09601 288 aa17.97■□□□□ 0.47
CD48-201ENST00000368045 CHD1LQ86WJ1 897 aa17.97■□□□□ 0.47
CD48-201ENST00000368045 ABCC4O15439 1325 aa17.97■□□□□ 0.47
CD48-201ENST00000368045 MAP2P11137 1827 aaKnown RBP17.97■□□□□ 0.47
CD48-201ENST00000368045 MFAP1P55081 439 aaKnown RBP17.96■□□□□ 0.47
CD48-201ENST00000368045 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
CD48-201ENST00000368045 API5Q9BZZ5 524 aaKnown RBP17.96■□□□□ 0.47
CD48-201ENST00000368045 RBM25P49756 843 aaKnown RBP17.95■□□□□ 0.46
CD48-201ENST00000368045 BMP2KLQ5H9B9 411 aa17.95■□□□□ 0.46
CD48-201ENST00000368045 IL27Q8NEV9 243 aa17.95■□□□□ 0.46
CD48-201ENST00000368045 MBIPQ9NS73 344 aa17.95■□□□□ 0.46
CD48-201ENST00000368045 HAP1P54257 671 aaPredicted RBP17.94■□□□□ 0.46
CD48-201ENST00000368045 FBLN1P23142 703 aa17.94■□□□□ 0.46
CD48-201ENST00000368045 TWISTNBQ3B726 338 aaPredicted RBP17.94■□□□□ 0.46
CD48-201ENST00000368045 CHMP5Q9NZZ3 219 aa17.94■□□□□ 0.46
CD48-201ENST00000368045 C3P01024 1663 aa17.93■□□□□ 0.46
CD48-201ENST00000368045 NRKQ7Z2Y5 1582 aa17.93■□□□□ 0.46
CD48-201ENST00000368045 AKAP12Q02952 1782 aa17.93■□□□□ 0.46
CD48-201ENST00000368045 TXNDC2Q86VQ3 553 aa17.93■□□□□ 0.46
CD48-201ENST00000368045 ESF1Q9H501 851 aaKnown RBP17.93■□□□□ 0.46
CD48-201ENST00000368045 EIF5BO60841 1220 aaKnown RBP17.92■□□□□ 0.46
CD48-201ENST00000368045 TSPYL6Q8N831 410 aa17.92■□□□□ 0.46
CD48-201ENST00000368045 THUMPD2Q9BTF0 503 aaKnown RBP17.92■□□□□ 0.46
CD48-201ENST00000368045 LNPKQ9C0E8 428 aa17.92■□□□□ 0.46
CD48-201ENST00000368045 TNRQ92752 1358 aa17.92■□□□□ 0.46
CD48-201ENST00000368045 HSCBQ8IWL3 235 aa17.91■□□□□ 0.46
CD48-201ENST00000368045 SNX21Q969T3 373 aa17.91■□□□□ 0.46
CD48-201ENST00000368045 TSPOAP1O95153 1857 aa17.91■□□□□ 0.46
CD48-201ENST00000368045 ITSN1Q15811 1721 aa17.9■□□□□ 0.46
CD48-201ENST00000368045 MLECQ14165 292 aa17.9■□□□□ 0.46
CD48-201ENST00000368045 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
CD48-201ENST00000368045 TMEM2Q9UHN6 1383 aa17.9■□□□□ 0.46
CD48-201ENST00000368045 BRPF3Q9ULD4 1205 aa17.89■□□□□ 0.45
CD48-201ENST00000368045 NCOA3Q9Y6Q9 1424 aa17.89■□□□□ 0.45
CD48-201ENST00000368045 L1TD1Q5T7N2 865 aaKnown RBP17.88■□□□□ 0.45
CD48-201ENST00000368045 ANKRD45Q5TZF3 282 aa17.88■□□□□ 0.45
CD48-201ENST00000368045 MCM4P33991 863 aa17.87■□□□□ 0.45
CD48-201ENST00000368045 RRS1Q15050 365 aaKnown RBP17.87■□□□□ 0.45
CD48-201ENST00000368045 C8orf58Q8NAV2 365 aa17.87■□□□□ 0.45
CD48-201ENST00000368045 PRR36Q9H6K5 1346 aa17.87■□□□□ 0.45
CD48-201ENST00000368045 PLEKHG3A1L390 1219 aa17.86■□□□□ 0.45
CD48-201ENST00000368045 KIAA0232Q92628 1395 aa17.86■□□□□ 0.45
CD48-201ENST00000368045 TTC21BQ7Z4L5 1316 aa17.86■□□□□ 0.45
CD48-201ENST00000368045 OVOS2A0A0J9YW53 1432 aa17.86■□□□□ 0.45
CD48-201ENST00000368045 OVOS2Q6IE36 1432 aa17.86■□□□□ 0.45
CD48-201ENST00000368045 ROBO2Q9HCK4 1378 aa17.85■□□□□ 0.45
CD48-201ENST00000368045 INTS3Q68E01 1043 aaKnown RBP17.85■□□□□ 0.45
CD48-201ENST00000368045 SIRT2Q8IXJ6 389 aa17.85■□□□□ 0.45
CD48-201ENST00000368045 CIZ1Q9ULV3 898 aaPredicted RBP17.85■□□□□ 0.45
CD48-201ENST00000368045 ADAMTS13Q76LX8 1427 aa17.85■□□□□ 0.45
CD48-201ENST00000368045 PLEKHG1Q9ULL1 1385 aa17.84■□□□□ 0.45
CD48-201ENST00000368045 EIF4A2Q14240 407 aaKnown RBP17.84■□□□□ 0.45
CD48-201ENST00000368045 TOPAZ1Q8N9V7 1692 aa17.84■□□□□ 0.45
CD48-201ENST00000368045 ELL2O00472 640 aaPredicted RBP17.84■□□□□ 0.45
CD48-201ENST00000368045 NCKAP5LQ9HCH0 1330 aa17.83■□□□□ 0.45
CD48-201ENST00000368045 DLG5Q8TDM6 1919 aa17.83■□□□□ 0.45
CD48-201ENST00000368045 USP31Q70CQ4 1352 aa17.83■□□□□ 0.44
CD48-201ENST00000368045 CHL1O00533 1208 aa17.83■□□□□ 0.44
CD48-201ENST00000368045 DDIT3P35638 169 aa17.83■□□□□ 0.44
CD48-201ENST00000368045 UBR1Q8IWV7 1749 aa17.83■□□□□ 0.44
CD48-201ENST00000368045 USP6P35125 1406 aa17.82■□□□□ 0.44
CD48-201ENST00000368045 C1orf115Q9H7X2 142 aa17.82■□□□□ 0.44
CD48-201ENST00000368045 FAM83GA6ND36 823 aa17.81■□□□□ 0.44
CD48-201ENST00000368045 DDX11L8A8MPP1 907 aa17.81■□□□□ 0.44
CD48-201ENST00000368045 PTPRCP08575 1304 aa17.81■□□□□ 0.44
CD48-201ENST00000368045 CDC45O75419 566 aa17.81■□□□□ 0.44
CD48-201ENST00000368045 SULT6B1Q6IMI4 303 aa17.81■□□□□ 0.44
CD48-201ENST00000368045 DCTPP1Q9H773 170 aa17.81■□□□□ 0.44
CD48-201ENST00000368045 ACEP12821 1306 aa17.81■□□□□ 0.44
CD48-201ENST00000368045 NALCNQ8IZF0 1738 aa17.8■□□□□ 0.44
CD48-201ENST00000368045 TBC1D9Q6ZT07 1266 aa17.8■□□□□ 0.44
CD48-201ENST00000368045 RPAP2Q8IXW5 612 aaPredicted RBP17.8■□□□□ 0.44
CD48-201ENST00000368045 ARHGEF10O15013 1369 aa17.8■□□□□ 0.44
CD48-201ENST00000368045 ANKRD44Q8N8A2 993 aa17.79■□□□□ 0.44
CD48-201ENST00000368045 SPRYD3Q8NCJ5 442 aa17.79■□□□□ 0.44
CD48-201ENST00000368045 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
CD48-201ENST00000368045 SSH2Q76I76 1423 aa17.79■□□□□ 0.44
CD48-201ENST00000368045 RGS12O14924 1447 aa17.78■□□□□ 0.44
CD48-201ENST00000368045 RGPD1P0DJD0 1748 aa17.78■□□□□ 0.44
CD48-201ENST00000368045 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.78■□□□□ 0.44
CD48-201ENST00000368045 HSP90AB1P08238 724 aaKnown RBP17.78■□□□□ 0.44
CD48-201ENST00000368045 PTMSP20962 102 aa17.78■□□□□ 0.44
CD48-201ENST00000368045 DCTN1Q14203 1278 aa17.78■□□□□ 0.44
CD48-201ENST00000368045 AEBP1Q8IUX7 1158 aa17.78■□□□□ 0.44
CD48-201ENST00000368045 KIF2CQ99661 725 aa17.77■□□□□ 0.44
CD48-201ENST00000368045 ATP10DQ9P241 1426 aa17.76■□□□□ 0.43
CD48-201ENST00000368045 FSD2A1L4K1 749 aa17.76■□□□□ 0.43
CD48-201ENST00000368045 FAM43AQ8N2R8 423 aa17.76■□□□□ 0.43
CD48-201ENST00000368045 CRB1P82279 1406 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms