RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 C1orf141Q5JVX7 400 aa6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 MAGI2Q86UL8 1455 aa6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 DDX58O95786 925 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 TEFQ10587 303 aa6.51□□□□□ -1.37
CDC42BPA-204ENST00000366767 ZNF521Q96K83 1311 aa6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 NEO1Q92859 1461 aa6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 KIF3AQ9Y496 699 aa6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 THEMISQ8N1K5 641 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 FYB1O15117 783 aa6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 PDIA4P13667 645 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 FKBP5Q13451 457 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 BMP2KLQ5H9B9 411 aa6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 MLH3Q9UHC1 1453 aa6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 TRIM27P14373 513 aa6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 CWC15Q9P013 229 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 POGZQ7Z3K3 1410 aa6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 TXNDC2Q86VQ3 553 aa6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 RILPL2Q969X0 211 aa6.5□□□□□ -1.37
CDC42BPA-204ENST00000366767 FGD1P98174 961 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 BCORL1Q5H9F3 1711 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 LMOD2Q6P5Q4 547 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 ERC2O15083 957 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 SULT6B1Q6IMI4 303 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 TET3O43151 1660 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 MBD3O95983 291 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 ZCCHC11Q5TAX3 1644 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 TTC21BQ7Z4L5 1316 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 RBM10P98175 930 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 FOXD4L1Q9NU39 408 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 TAOK2Q9UL54 1235 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 LETM1O95202 739 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 TAF3Q5VWG9 929 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 SNX21Q969T3 373 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 SIRT1Q96EB6 747 aa6.49□□□□□ -1.37
CDC42BPA-204ENST00000366767 PATL2C9JE40 543 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 NAP1L2Q9ULW6 460 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 CLASP1Q7Z460 1538 aa6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 HIP1O00291 1037 aa6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 UBTFL1P0CB47 393 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 ERC1Q8IUD2 1116 aa6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 ZKSCAN1P17029 563 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 NUCB1Q02818 461 aa6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 SOS1Q07889 1333 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 RNF20Q5VTR2 975 aa6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 ZNF592Q92610 1267 aa6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 ERVK-7P63135 1459 aa6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 TULP1O00294 542 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 PCDHB15Q9Y5E8 787 aa6.48□□□□□ -1.37
CDC42BPA-204ENST00000366767 SLC4A2P04920 1241 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 NEXNQ0ZGT2 675 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 LRRFIP1Q32MZ4 808 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 SMC5Q8IY18 1101 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 LRRCC1Q9C099 1032 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 CNTROBQ8N137 903 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 TBC1D2Q9BYX2 928 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 ZFYVE16Q7Z3T8 1539 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 NLRP6P59044 892 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 KIF24Q5T7B8 1368 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 CCDC173Q0VFZ6 552 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 PLEKHO1Q53GL0 409 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 TTC21AQ8NDW8 1320 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 YTHDC2Q9H6S0 1430 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 NUTM2FA1L443 756 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 DIAPH3Q9NSV4 1193 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 RAB11FIP3O75154 756 aa6.47□□□□□ -1.37
CDC42BPA-204ENST00000366767 RDXP35241 583 aaKnown RBP6.46□□□□□ -1.37
CDC42BPA-204ENST00000366767 GNL2Q13823 731 aaKnown RBP6.46□□□□□ -1.37
CDC42BPA-204ENST00000366767 WAPLQ7Z5K2 1190 aa6.46□□□□□ -1.37
CDC42BPA-204ENST00000366767 A0A1W2PP64 1363 aa6.46□□□□□ -1.37
CDC42BPA-204ENST00000366767 MRPL50Q8N5N7 158 aaKnown RBP6.46□□□□□ -1.37
CDC42BPA-204ENST00000366767 MAP3K4Q9Y6R4 1608 aa6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 NPATQ14207 1427 aa6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 ANO2Q9NQ90 1003 aa6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 PSME1Q06323 249 aa6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 IFIT2P09913 472 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 SPINK5Q9NQ38 1064 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 C9orf78Q9NZ63 289 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 LMTK2Q8IWU2 1503 aa6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 MCTP1Q6DN14 999 aa6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 LTV1Q96GA3 475 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 ZBTB40Q9NUA8 1239 aa6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 KAT6BQ8WYB5 2073 aa6.46□□□□□ -1.38
CDC42BPA-204ENST00000366767 CCDC39Q9UFE4 941 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 NEURL4Q96JN8 1562 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 TAF7LQ5H9L4 462 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 CLASRPQ8N2M8 674 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 ZMYND15Q9H091 742 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 POLKQ9UBT6 870 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 RIMS2Q9UQ26 1411 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 CDC42BPBQ9Y5S2 1711 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 GNAT3A8MTJ3 354 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 CCAR2Q8N163 923 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 ARGLU1Q9NWB6 273 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 PSMA5P28066 241 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 G3BP1Q13283 466 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 KCNH5Q8NCM2 988 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 GRPEL1Q9HAV7 217 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 TPM3P06753 285 aa6.45□□□□□ -1.38
CDC42BPA-204ENST00000366767 C1orf115Q9H7X2 142 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms