RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 NSD3Q9BZ95 1437 aa11.41□□□□□ -0.58
TOP1-201ENST00000361337 KCNA6P17658 529 aa11.41□□□□□ -0.58
TOP1-201ENST00000361337 PHF23Q9BUL5 403 aaPredicted RBP11.41□□□□□ -0.58
TOP1-201ENST00000361337 C22orf23Q9BZE7 217 aa11.41□□□□□ -0.58
TOP1-201ENST00000361337 CCDC9Q9Y3X0 531 aaKnown RBP11.41□□□□□ -0.58
TOP1-201ENST00000361337 RPGRIP1LQ68CZ1 1315 aa11.41□□□□□ -0.58
TOP1-201ENST00000361337 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
TOP1-201ENST00000361337 STAC3Q96MF2 364 aa11.41□□□□□ -0.58
TOP1-201ENST00000361337 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
TOP1-201ENST00000361337 TRAK2O60296 914 aa11.4□□□□□ -0.58
TOP1-201ENST00000361337 PIP4K2BP78356 416 aa11.4□□□□□ -0.58
TOP1-201ENST00000361337 ZC3H6P61129 1189 aaKnown RBP11.4□□□□□ -0.58
TOP1-201ENST00000361337 RWDD1Q9H446 243 aaPredicted RBP11.4□□□□□ -0.58
TOP1-201ENST00000361337 MVPQ14764 893 aaKnown RBP11.4□□□□□ -0.58
TOP1-201ENST00000361337 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
TOP1-201ENST00000361337 IQSEC2Q5JU85 1478 aa11.39□□□□□ -0.59
TOP1-201ENST00000361337 ZNF330Q9Y3S2 320 aaPredicted RBP11.39□□□□□ -0.59
TOP1-201ENST00000361337 ADGRB2O60241 1585 aa11.39□□□□□ -0.59
TOP1-201ENST00000361337 DDX17Q92841 729 aaKnown RBP11.38□□□□□ -0.59
TOP1-201ENST00000361337 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
TOP1-201ENST00000361337 EMILIN1Q9Y6C2 1016 aa11.38□□□□□ -0.59
TOP1-201ENST00000361337 ERBB4Q15303 1308 aa11.38□□□□□ -0.59
TOP1-201ENST00000361337 DIAPH1O60610 1272 aaKnown RBP11.38□□□□□ -0.59
TOP1-201ENST00000361337 UBR1Q8IWV7 1749 aa11.37□□□□□ -0.59
TOP1-201ENST00000361337 FTSJ3Q8IY81 847 aaKnown RBP11.37□□□□□ -0.59
TOP1-201ENST00000361337 MYH16Q9H6N6 1097 aa11.37□□□□□ -0.59
TOP1-201ENST00000361337 TRIM27P14373 513 aa11.37□□□□□ -0.59
TOP1-201ENST00000361337 NGEFQ8N5V2 710 aa11.37□□□□□ -0.59
TOP1-201ENST00000361337 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
TOP1-201ENST00000361337 MON2Q7Z3U7 1717 aa11.37□□□□□ -0.59
TOP1-201ENST00000361337 WASLO00401 505 aaPredicted RBP11.37□□□□□ -0.59
TOP1-201ENST00000361337 PTMAP06454 111 aaKnown RBP11.37□□□□□ -0.59
TOP1-201ENST00000361337 WDR63Q8IWG1 891 aa11.37□□□□□ -0.59
TOP1-201ENST00000361337 DZIP1LQ8IYY4 767 aaKnown RBP11.37□□□□□ -0.59
TOP1-201ENST00000361337 CHMP5Q9NZZ3 219 aa11.37□□□□□ -0.59
TOP1-201ENST00000361337 N4BP2Q86UW6 1770 aaPredicted RBP11.36□□□□□ -0.59
TOP1-201ENST00000361337 RIMS2Q9UQ26 1411 aa11.36□□□□□ -0.59
TOP1-201ENST00000361337 EXOSC9Q06265 439 aaKnown RBP11.36□□□□□ -0.59
TOP1-201ENST00000361337 ITPRIPQ8IWB1 547 aa11.36□□□□□ -0.59
TOP1-201ENST00000361337 FOXD4L1Q9NU39 408 aa11.36□□□□□ -0.59
TOP1-201ENST00000361337 MSNP26038 577 aaKnown RBP11.36□□□□□ -0.59
TOP1-201ENST00000361337 ZKSCAN2Q63HK3 967 aa11.36□□□□□ -0.59
TOP1-201ENST00000361337 GAS2L3Q86XJ1 694 aa11.36□□□□□ -0.59
TOP1-201ENST00000361337 PRDM10Q9NQV6 1147 aa11.36□□□□□ -0.59
TOP1-201ENST00000361337 RIPK4P57078 832 aa11.35□□□□□ -0.59
TOP1-201ENST00000361337 USHBP1Q8N6Y0 703 aa11.35□□□□□ -0.59
TOP1-201ENST00000361337 SSH1Q8WYL5 1049 aa11.35□□□□□ -0.59
TOP1-201ENST00000361337 RTF1Q92541 710 aaKnown RBP11.35□□□□□ -0.59
TOP1-201ENST00000361337 SMC4Q9NTJ3 1288 aa11.35□□□□□ -0.59
TOP1-201ENST00000361337 PLCB2Q00722 1185 aa11.35□□□□□ -0.59
TOP1-201ENST00000361337 APBB1O00213 710 aa11.35□□□□□ -0.59
TOP1-201ENST00000361337 CLCN1P35523 988 aa11.35□□□□□ -0.59
TOP1-201ENST00000361337 KIF20BQ96Q89 1820 aa11.34□□□□□ -0.59
TOP1-201ENST00000361337 CD2BP2O95400 341 aaKnown RBP11.34□□□□□ -0.59
TOP1-201ENST00000361337 PRKAR2BP31323 418 aa11.34□□□□□ -0.59
TOP1-201ENST00000361337 GRPEL1Q9HAV7 217 aa11.34□□□□□ -0.59
TOP1-201ENST00000361337 NUTM2BA6NNL0 878 aaPredicted RBP11.33□□□□□ -0.6
TOP1-201ENST00000361337 NUTM2EB1AL46 878 aaPredicted RBP11.33□□□□□ -0.6
TOP1-201ENST00000361337 DCTN1Q14203 1278 aa11.33□□□□□ -0.6
TOP1-201ENST00000361337 SULT6B1Q6IMI4 303 aa11.33□□□□□ -0.6
TOP1-201ENST00000361337 NUTM2AQ8IVF1 878 aaPredicted RBP11.33□□□□□ -0.6
TOP1-201ENST00000361337 TMEM57Q8N5G2 664 aa11.33□□□□□ -0.6
TOP1-201ENST00000361337 CABLES1Q8TDN4 633 aa11.33□□□□□ -0.6
TOP1-201ENST00000361337 NOB1Q9ULX3 412 aaKnown RBP11.33□□□□□ -0.6
TOP1-201ENST00000361337 CDC42BPGQ6DT37 1551 aa11.33□□□□□ -0.6
TOP1-201ENST00000361337 LNPKQ9C0E8 428 aa11.33□□□□□ -0.6
TOP1-201ENST00000361337 STRN4Q9NRL3 753 aa11.33□□□□□ -0.6
TOP1-201ENST00000361337 NLRP2Q9NX02 1062 aa11.33□□□□□ -0.6
TOP1-201ENST00000361337 TNPO1Q92973 898 aaKnown RBP11.33□□□□□ -0.6
TOP1-201ENST00000361337 ZHX1Q9UKY1 873 aaPredicted RBP11.33□□□□□ -0.6
TOP1-201ENST00000361337 DDIT3P35638 169 aa11.32□□□□□ -0.6
TOP1-201ENST00000361337 HSCBQ8IWL3 235 aa11.32□□□□□ -0.6
TOP1-201ENST00000361337 ACEP12821 1306 aa11.32□□□□□ -0.6
TOP1-201ENST00000361337 LRRC7Q96NW7 1537 aa11.32□□□□□ -0.6
TOP1-201ENST00000361337 MRE11P49959 708 aa11.32□□□□□ -0.6
TOP1-201ENST00000361337 CCDC27Q2M243 656 aa11.32□□□□□ -0.6
TOP1-201ENST00000361337 PPP6R1Q9UPN7 881 aa11.32□□□□□ -0.6
TOP1-201ENST00000361337 PDE4CQ08493 712 aa11.31□□□□□ -0.6
TOP1-201ENST00000361337 AAMPQ13685 434 aa11.31□□□□□ -0.6
TOP1-201ENST00000361337 ORAI2Q96SN7 254 aa11.31□□□□□ -0.6
TOP1-201ENST00000361337 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
TOP1-201ENST00000361337 TRIM35Q9UPQ4 493 aa11.31□□□□□ -0.6
TOP1-201ENST00000361337 ZFYVE9O95405 1425 aa11.31□□□□□ -0.6
TOP1-201ENST00000361337 FYB1O15117 783 aa11.31□□□□□ -0.6
TOP1-201ENST00000361337 HDAC1Q13547 482 aaPredicted RBP11.31□□□□□ -0.6
TOP1-201ENST00000361337 MIS18AQ9NYP9 233 aa11.31□□□□□ -0.6
TOP1-201ENST00000361337 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
TOP1-201ENST00000361337 SMC5Q8IY18 1101 aa11.3□□□□□ -0.6
TOP1-201ENST00000361337 KIF2CQ99661 725 aa11.3□□□□□ -0.6
TOP1-201ENST00000361337 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
TOP1-201ENST00000361337 PHRF1Q9P1Y6 1649 aaKnown RBP11.3□□□□□ -0.6
TOP1-201ENST00000361337 EVA1CP58658 441 aa11.3□□□□□ -0.6
TOP1-201ENST00000361337 CHRNA2Q15822 529 aa11.3□□□□□ -0.6
TOP1-201ENST00000361337 CRYBG1Q9Y4K1 1723 aa11.29□□□□□ -0.6
TOP1-201ENST00000361337 ESPNB1AK53 854 aa11.29□□□□□ -0.6
TOP1-201ENST00000361337 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
TOP1-201ENST00000361337 METP08581 1390 aa11.29□□□□□ -0.6
TOP1-201ENST00000361337 RGPD1P0DJD0 1748 aa11.29□□□□□ -0.6
TOP1-201ENST00000361337 SLC4A10Q6U841 1118 aa11.29□□□□□ -0.6
TOP1-201ENST00000361337 ZBTB40Q9NUA8 1239 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms