RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 MON2Q7Z3U7 1717 aa20.46■□□□□ 0.87
PTPN5-201ENST00000358540 AATKQ6ZMQ8 1374 aa20.46■□□□□ 0.87
PTPN5-201ENST00000358540 TRIM27P14373 513 aa20.45■□□□□ 0.86
PTPN5-201ENST00000358540 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
PTPN5-201ENST00000358540 DZIP1LQ8IYY4 767 aaKnown RBP20.45■□□□□ 0.86
PTPN5-201ENST00000358540 NOB1Q9ULX3 412 aaKnown RBP20.45■□□□□ 0.86
PTPN5-201ENST00000358540 TBX22Q9Y458 520 aa20.45■□□□□ 0.86
PTPN5-201ENST00000358540 CDK12Q9NYV4 1490 aaPredicted RBP20.45■□□□□ 0.86
PTPN5-201ENST00000358540 ITSN1Q15811 1721 aa20.45■□□□□ 0.86
PTPN5-201ENST00000358540 IL16Q14005 1332 aa20.44■□□□□ 0.86
PTPN5-201ENST00000358540 PLEKHG3A1L390 1219 aa20.44■□□□□ 0.86
PTPN5-201ENST00000358540 KCNA6P17658 529 aa20.44■□□□□ 0.86
PTPN5-201ENST00000358540 NGDNQ8NEJ9 315 aaKnown RBP20.44■□□□□ 0.86
PTPN5-201ENST00000358540 MVPQ14764 893 aaKnown RBP20.43■□□□□ 0.86
PTPN5-201ENST00000358540 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
PTPN5-201ENST00000358540 ARHGAP23Q9P227 1491 aa20.43■□□□□ 0.86
PTPN5-201ENST00000358540 EIF4A2Q14240 407 aaKnown RBP20.43■□□□□ 0.86
PTPN5-201ENST00000358540 ITPRIPQ8IWB1 547 aa20.43■□□□□ 0.86
PTPN5-201ENST00000358540 USP6P35125 1406 aa20.42■□□□□ 0.86
PTPN5-201ENST00000358540 GSE1Q14687 1217 aa20.42■□□□□ 0.86
PTPN5-201ENST00000358540 SLIT1O75093 1534 aa20.42■□□□□ 0.86
PTPN5-201ENST00000358540 AKAP12Q02952 1782 aa20.42■□□□□ 0.86
PTPN5-201ENST00000358540 SULT6B1Q6IMI4 303 aa20.42■□□□□ 0.86
PTPN5-201ENST00000358540 C8orf34Q49A92 452 aa20.42■□□□□ 0.86
PTPN5-201ENST00000358540 NUTM2GQ5VZR2 741 aa20.42■□□□□ 0.86
PTPN5-201ENST00000358540 CT47B1P0C2W7 299 aaPredicted RBP20.41■□□□□ 0.86
PTPN5-201ENST00000358540 TSPYL6Q8N831 410 aa20.41■□□□□ 0.86
PTPN5-201ENST00000358540 FAM161AQ3B820 660 aa20.4■□□□□ 0.86
PTPN5-201ENST00000358540 ATF7IPQ6VMQ6 1270 aa20.4■□□□□ 0.86
PTPN5-201ENST00000358540 TMEM57Q8N5G2 664 aa20.38■□□□□ 0.85
PTPN5-201ENST00000358540 MBIPQ9NS73 344 aa20.38■□□□□ 0.85
PTPN5-201ENST00000358540 OVOS2A0A0J9YW53 1432 aa20.38■□□□□ 0.85
PTPN5-201ENST00000358540 OVOS2Q6IE36 1432 aa20.38■□□□□ 0.85
PTPN5-201ENST00000358540 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
PTPN5-201ENST00000358540 MAP3K19Q56UN5 1328 aa20.35■□□□□ 0.85
PTPN5-201ENST00000358540 PDZRN3Q9UPQ7 1066 aa20.35■□□□□ 0.85
PTPN5-201ENST00000358540 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
PTPN5-201ENST00000358540 SLC4A3P48751 1232 aa20.34■□□□□ 0.85
PTPN5-201ENST00000358540 DIP2AQ14689 1571 aa20.34■□□□□ 0.85
PTPN5-201ENST00000358540 NRKQ7Z2Y5 1582 aa20.34■□□□□ 0.85
PTPN5-201ENST00000358540 NFKBIBQ15653 356 aa20.34■□□□□ 0.85
PTPN5-201ENST00000358540 GNAI1P63096 354 aa20.33■□□□□ 0.85
PTPN5-201ENST00000358540 VAMP4O75379 141 aa20.33■□□□□ 0.85
PTPN5-201ENST00000358540 MCM10Q7L590 875 aa20.33■□□□□ 0.85
PTPN5-201ENST00000358540 C8orf58Q8NAV2 365 aa20.33■□□□□ 0.85
PTPN5-201ENST00000358540 IFT57Q9NWB7 429 aa20.33■□□□□ 0.85
PTPN5-201ENST00000358540 C14orf37Q86TY3 774 aa20.33■□□□□ 0.84
PTPN5-201ENST00000358540 RWDD1Q9H446 243 aaPredicted RBP20.33■□□□□ 0.84
PTPN5-201ENST00000358540 RGPD8O14715 1765 aaPredicted RBP20.32■□□□□ 0.84
PTPN5-201ENST00000358540 KIF16BQ96L93 1317 aa20.32■□□□□ 0.84
PTPN5-201ENST00000358540 NLRP6P59044 892 aa20.32■□□□□ 0.84
PTPN5-201ENST00000358540 CALD1Q05682 793 aaKnown RBP20.31■□□□□ 0.84
PTPN5-201ENST00000358540 KRT24Q2M2I5 525 aa20.31■□□□□ 0.84
PTPN5-201ENST00000358540 SSH2Q76I76 1423 aa20.31■□□□□ 0.84
PTPN5-201ENST00000358540 DDX19BQ9UMR2 479 aa20.31■□□□□ 0.84
PTPN5-201ENST00000358540 PLEKHG5O94827 1062 aa20.31■□□□□ 0.84
PTPN5-201ENST00000358540 CEP170BQ9Y4F5 1589 aaPredicted RBP20.3■□□□□ 0.84
PTPN5-201ENST00000358540 ZNF853P0CG23 659 aa20.3■□□□□ 0.84
PTPN5-201ENST00000358540 AMPHP49418 695 aa20.3■□□□□ 0.84
PTPN5-201ENST00000358540 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
PTPN5-201ENST00000358540 RIMS1Q86UR5 1692 aaKnown RBP20.3■□□□□ 0.84
PTPN5-201ENST00000358540 PEAK1Q9H792 1746 aa20.3■□□□□ 0.84
PTPN5-201ENST00000358540 IPO8O15397 1037 aaKnown RBP20.3■□□□□ 0.84
PTPN5-201ENST00000358540 LMOD3Q0VAK6 560 aa20.3■□□□□ 0.84
PTPN5-201ENST00000358540 FOXO3O43524 673 aa20.29■□□□□ 0.84
PTPN5-201ENST00000358540 ALDH1L2Q3SY69 923 aa20.29■□□□□ 0.84
PTPN5-201ENST00000358540 CFAP44Q96MT7 982 aa20.29■□□□□ 0.84
PTPN5-201ENST00000358540 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
PTPN5-201ENST00000358540 DAXXQ9UER7 740 aaPredicted RBP20.29■□□□□ 0.84
PTPN5-201ENST00000358540 USP31Q70CQ4 1352 aa20.29■□□□□ 0.84
PTPN5-201ENST00000358540 AAMPQ13685 434 aa20.28■□□□□ 0.84
PTPN5-201ENST00000358540 MRPL50Q8N5N7 158 aaKnown RBP20.28■□□□□ 0.84
PTPN5-201ENST00000358540 TTC21AQ8NDW8 1320 aa20.28■□□□□ 0.84
PTPN5-201ENST00000358540 ANKLE2Q86XL3 938 aa20.28■□□□□ 0.84
PTPN5-201ENST00000358540 SEC24BO95487 1268 aa20.27■□□□□ 0.84
PTPN5-201ENST00000358540 C1orf115Q9H7X2 142 aa20.27■□□□□ 0.84
PTPN5-201ENST00000358540 LTV1Q96GA3 475 aaPredicted RBP20.27■□□□□ 0.84
PTPN5-201ENST00000358540 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
PTPN5-201ENST00000358540 MIS18AQ9NYP9 233 aa20.27■□□□□ 0.83
PTPN5-201ENST00000358540 ABTB2Q8N961 1025 aa20.25■□□□□ 0.83
PTPN5-201ENST00000358540 XRN1Q8IZH2 1706 aaKnown RBP20.25■□□□□ 0.83
PTPN5-201ENST00000358540 ZBTB40Q9NUA8 1239 aa20.25■□□□□ 0.83
PTPN5-201ENST00000358540 EYA1Q99502 592 aa20.23■□□□□ 0.83
PTPN5-201ENST00000358540 ZBTB7CA1YPR0 619 aa20.23■□□□□ 0.83
PTPN5-201ENST00000358540 FLT4P35916 1363 aa20.23■□□□□ 0.83
PTPN5-201ENST00000358540 MTHFSDQ2M296 383 aaKnown RBP20.22■□□□□ 0.83
PTPN5-201ENST00000358540 SBNO1A3KN83 1393 aa20.22■□□□□ 0.83
PTPN5-201ENST00000358540 NALCNQ8IZF0 1738 aa20.21■□□□□ 0.83
PTPN5-201ENST00000358540 PHF8Q9UPP1 1060 aa20.2■□□□□ 0.82
PTPN5-201ENST00000358540 PIK3C2AO00443 1686 aa20.2■□□□□ 0.82
PTPN5-201ENST00000358540 ZNF428Q96B54 188 aa20.2■□□□□ 0.82
PTPN5-201ENST00000358540 XPCQ01831 940 aaPredicted RBP20.19■□□□□ 0.82
PTPN5-201ENST00000358540 HDAC1Q13547 482 aaPredicted RBP20.19■□□□□ 0.82
PTPN5-201ENST00000358540 ESCO1Q5FWF5 840 aa20.19■□□□□ 0.82
PTPN5-201ENST00000358540 USHBP1Q8N6Y0 703 aa20.19■□□□□ 0.82
PTPN5-201ENST00000358540 ANKARQ7Z5J8 1434 aa20.18■□□□□ 0.82
PTPN5-201ENST00000358540 HOXC9P31274 260 aa20.18■□□□□ 0.82
PTPN5-201ENST00000358540 ARHGEF10O15013 1369 aa20.17■□□□□ 0.82
PTPN5-201ENST00000358540 PIK3R4Q99570 1358 aa20.17■□□□□ 0.82
PTPN5-201ENST00000358540 ZBTB7BO15156 539 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms