RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 FGD1P98174 961 aa8.35□□□□□ -1.07
RTN4-203ENST00000357376 KRT24Q2M2I5 525 aa8.35□□□□□ -1.07
RTN4-203ENST00000357376 NUDT16Q96DE0 195 aaKnown RBP8.35□□□□□ -1.07
RTN4-203ENST00000357376 POLKQ9UBT6 870 aa8.35□□□□□ -1.07
RTN4-203ENST00000357376 NAP1L2Q9ULW6 460 aaPredicted RBP8.35□□□□□ -1.07
RTN4-203ENST00000357376 KDM5AP29375 1690 aaKnown RBP8.35□□□□□ -1.07
RTN4-203ENST00000357376 TSHZ3Q63HK5 1081 aa8.35□□□□□ -1.07
RTN4-203ENST00000357376 MYO5CQ9NQX4 1742 aa8.35□□□□□ -1.07
RTN4-203ENST00000357376 FAM13BQ9NYF5 915 aa8.35□□□□□ -1.07
RTN4-203ENST00000357376 ERCC6L2Q5T890 1561 aa8.34□□□□□ -1.07
RTN4-203ENST00000357376 VAMP4O75379 141 aa8.34□□□□□ -1.07
RTN4-203ENST00000357376 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
RTN4-203ENST00000357376 R3HCC1Q9Y3T6 440 aaKnown RBP8.34□□□□□ -1.07
RTN4-203ENST00000357376 TRPM2O94759 1503 aa8.34□□□□□ -1.07
RTN4-203ENST00000357376 ERC2O15083 957 aa8.34□□□□□ -1.07
RTN4-203ENST00000357376 MAP4K4O95819 1239 aaPredicted RBP8.34□□□□□ -1.07
RTN4-203ENST00000357376 KIAA2012Q0VF49 1180 aa8.34□□□□□ -1.07
RTN4-203ENST00000357376 MRPL50Q8N5N7 158 aaKnown RBP8.34□□□□□ -1.07
RTN4-203ENST00000357376 CHMP3Q9Y3E7 222 aa8.34□□□□□ -1.07
RTN4-203ENST00000357376 NCKAP5LQ9HCH0 1330 aa8.33□□□□□ -1.08
RTN4-203ENST00000357376 CCDC61Q9Y6R9 512 aa8.33□□□□□ -1.08
RTN4-203ENST00000357376 IQGAP3Q86VI3 1631 aa8.33□□□□□ -1.08
RTN4-203ENST00000357376 CDC42BPBQ9Y5S2 1711 aa8.33□□□□□ -1.08
RTN4-203ENST00000357376 CCDC173Q0VFZ6 552 aa8.33□□□□□ -1.08
RTN4-203ENST00000357376 AEBP1Q8IUX7 1158 aa8.33□□□□□ -1.08
RTN4-203ENST00000357376 UPF3BQ9BZI7 483 aaKnown RBP8.33□□□□□ -1.08
RTN4-203ENST00000357376 ANTXR1Q9H6X2 564 aa8.33□□□□□ -1.08
RTN4-203ENST00000357376 IL1RAPL2Q9NP60 686 aa8.33□□□□□ -1.08
RTN4-203ENST00000357376 ZBTB7BO15156 539 aaPredicted RBP8.32□□□□□ -1.08
RTN4-203ENST00000357376 BAG4O95429 457 aaKnown RBP8.32□□□□□ -1.08
RTN4-203ENST00000357376 GNAI2P04899 355 aa8.32□□□□□ -1.08
RTN4-203ENST00000357376 RPAP2Q8IXW5 612 aaPredicted RBP8.32□□□□□ -1.08
RTN4-203ENST00000357376 DRC7Q8IY82 874 aa8.32□□□□□ -1.08
RTN4-203ENST00000357376 ISY1Q9ULR0 285 aaKnown RBP8.32□□□□□ -1.08
RTN4-203ENST00000357376 ZNF518AQ6AHZ1 1483 aa8.32□□□□□ -1.08
RTN4-203ENST00000357376 ABCC1P33527 1531 aa8.32□□□□□ -1.08
RTN4-203ENST00000357376 MEIS3Q99687 375 aa8.32□□□□□ -1.08
RTN4-203ENST00000357376 UNC13BO14795 1591 aa8.32□□□□□ -1.08
RTN4-203ENST00000357376 SURF6O75683 361 aaKnown RBP8.32□□□□□ -1.08
RTN4-203ENST00000357376 UBTFL1P0CB47 393 aaPredicted RBP8.32□□□□□ -1.08
RTN4-203ENST00000357376 EID1Q9Y6B2 187 aa8.32□□□□□ -1.08
RTN4-203ENST00000357376 NPATQ14207 1427 aa8.32□□□□□ -1.08
RTN4-203ENST00000357376 NLRP6P59044 892 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 RBM10P98175 930 aaKnown RBP8.31□□□□□ -1.08
RTN4-203ENST00000357376 SLC26A8Q96RN1 970 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 SYCE3A1L190 88 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 WASLO00401 505 aaPredicted RBP8.31□□□□□ -1.08
RTN4-203ENST00000357376 OTUD7AQ8TE49 926 aaPredicted RBP8.31□□□□□ -1.08
RTN4-203ENST00000357376 DIAPH3Q9NSV4 1193 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 SBNO2Q9Y2G9 1366 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 PHF14O94880 888 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 TTC22Q5TAA0 569 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 SNX21Q969T3 373 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 LRRCC1Q9C099 1032 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 RBM27Q9P2N5 1060 aaKnown RBP8.31□□□□□ -1.08
RTN4-203ENST00000357376 CCDC9Q9Y3X0 531 aaKnown RBP8.31□□□□□ -1.08
RTN4-203ENST00000357376 CLTCL1P53675 1640 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 SDSP20132 328 aa8.31□□□□□ -1.08
RTN4-203ENST00000357376 VPS37CA5D8V6 355 aaPredicted RBP8.3□□□□□ -1.08
RTN4-203ENST00000357376 RBM25P49756 843 aaKnown RBP8.3□□□□□ -1.08
RTN4-203ENST00000357376 RAB3GAP1Q15042 981 aa8.3□□□□□ -1.08
RTN4-203ENST00000357376 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.3□□□□□ -1.08
RTN4-203ENST00000357376 PLEKHF1Q96S99 279 aa8.3□□□□□ -1.08
RTN4-203ENST00000357376 PLXNC1O60486 1568 aa8.3□□□□□ -1.08
RTN4-203ENST00000357376 GNAI3P08754 354 aa8.3□□□□□ -1.08
RTN4-203ENST00000357376 ARHGAP45Q92619 1136 aa8.3□□□□□ -1.08
RTN4-203ENST00000357376 CWC22Q9HCG8 908 aaKnown RBP8.3□□□□□ -1.08
RTN4-203ENST00000357376 MADDQ8WXG6 1647 aa8.3□□□□□ -1.08
RTN4-203ENST00000357376 TEFQ10587 303 aa8.3□□□□□ -1.08
RTN4-203ENST00000357376 CLCN1P35523 988 aa8.29□□□□□ -1.08
RTN4-203ENST00000357376 CCT4P50991 539 aaKnown RBP8.29□□□□□ -1.08
RTN4-203ENST00000357376 HSP90AB2PQ58FF8 381 aa8.29□□□□□ -1.08
RTN4-203ENST00000357376 CCDC30Q5VVM6 783 aa8.29□□□□□ -1.08
RTN4-203ENST00000357376 ZNF692Q9BU19 519 aaPredicted RBP8.29□□□□□ -1.08
RTN4-203ENST00000357376 GDPD2Q9HCC8 539 aa8.29□□□□□ -1.08
RTN4-203ENST00000357376 C9orf78Q9NZ63 289 aaPredicted RBP8.29□□□□□ -1.08
RTN4-203ENST00000357376 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.29□□□□□ -1.08
RTN4-203ENST00000357376 FIBPO43427 364 aa8.29□□□□□ -1.08
RTN4-203ENST00000357376 CHAF1AQ13111 956 aaPredicted RBP8.29□□□□□ -1.08
RTN4-203ENST00000357376 NUTM1Q86Y26 1132 aa8.29□□□□□ -1.08
RTN4-203ENST00000357376 PLEKHM2Q8IWE5 1019 aa8.29□□□□□ -1.08
RTN4-203ENST00000357376 ZGPATQ8N5A5 531 aaKnown RBP8.29□□□□□ -1.08
RTN4-203ENST00000357376 PUS7Q96PZ0 661 aaKnown RBP8.29□□□□□ -1.08
RTN4-203ENST00000357376 LARP6Q9BRS8 491 aaKnown RBP8.29□□□□□ -1.08
RTN4-203ENST00000357376 CD2BP2O95400 341 aaKnown RBP8.29□□□□□ -1.08
RTN4-203ENST00000357376 HDGFL1Q5TGJ6 251 aa8.29□□□□□ -1.08
RTN4-203ENST00000357376 GPATCH3Q96I76 525 aa8.29□□□□□ -1.08
RTN4-203ENST00000357376 SMC3Q9UQE7 1217 aa8.29□□□□□ -1.08
RTN4-203ENST00000357376 E9PCH4 1651 aa8.28□□□□□ -1.08
RTN4-203ENST00000357376 ZRSR1Q15695 479 aaKnown RBP8.28□□□□□ -1.08
RTN4-203ENST00000357376 ZSCAN30Q86W11 494 aa8.28□□□□□ -1.08
RTN4-203ENST00000357376 MBD3O95983 291 aa8.28□□□□□ -1.08
RTN4-203ENST00000357376 KLHL40Q2TBA0 621 aa8.28□□□□□ -1.08
RTN4-203ENST00000357376 ZFYVE16Q7Z3T8 1539 aa8.28□□□□□ -1.08
RTN4-203ENST00000357376 MYOM2P54296 1465 aa8.27□□□□□ -1.08
RTN4-203ENST00000357376 MX1P20591 662 aa8.27□□□□□ -1.08
RTN4-203ENST00000357376 ANKRD44Q8N8A2 993 aa8.27□□□□□ -1.08
RTN4-203ENST00000357376 YTHDC2Q9H6S0 1430 aaKnown RBP8.27□□□□□ -1.09
RTN4-203ENST00000357376 IFIT2P09913 472 aaKnown RBP8.27□□□□□ -1.09
RTN4-203ENST00000357376 HSP90B1P14625 803 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms