RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 HMOX1P09601 288 aa13.66□□□□□ -0.22
PTPN2-203ENST00000353319 RARSP54136 660 aaKnown RBP13.66□□□□□ -0.22
PTPN2-203ENST00000353319 NLRP6P59044 892 aa13.66□□□□□ -0.22
PTPN2-203ENST00000353319 MAP3K19Q56UN5 1328 aa13.66□□□□□ -0.22
PTPN2-203ENST00000353319 CALD1Q05682 793 aaKnown RBP13.65□□□□□ -0.22
PTPN2-203ENST00000353319 C20orf194Q5TEA3 1177 aa13.65□□□□□ -0.22
PTPN2-203ENST00000353319 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
PTPN2-203ENST00000353319 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
PTPN2-203ENST00000353319 C19orf44Q9H6X5 657 aa13.65□□□□□ -0.22
PTPN2-203ENST00000353319 FLT4P35916 1363 aa13.65□□□□□ -0.22
PTPN2-203ENST00000353319 RGPD1P0DJD0 1748 aa13.65□□□□□ -0.22
PTPN2-203ENST00000353319 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
PTPN2-203ENST00000353319 HSP90AB2PQ58FF8 381 aa13.64□□□□□ -0.23
PTPN2-203ENST00000353319 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
PTPN2-203ENST00000353319 MARF1Q9Y4F3 1742 aaKnown RBP13.64□□□□□ -0.23
PTPN2-203ENST00000353319 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
PTPN2-203ENST00000353319 ABTB2Q8N961 1025 aa13.64□□□□□ -0.23
PTPN2-203ENST00000353319 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
PTPN2-203ENST00000353319 ARHGEF10O15013 1369 aa13.63□□□□□ -0.23
PTPN2-203ENST00000353319 PSME1Q06323 249 aa13.62□□□□□ -0.23
PTPN2-203ENST00000353319 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
PTPN2-203ENST00000353319 C14orf37Q86TY3 774 aa13.62□□□□□ -0.23
PTPN2-203ENST00000353319 ZNF853P0CG23 659 aa13.61□□□□□ -0.23
PTPN2-203ENST00000353319 AMPHP49418 695 aa13.61□□□□□ -0.23
PTPN2-203ENST00000353319 AAMPQ13685 434 aa13.61□□□□□ -0.23
PTPN2-203ENST00000353319 ZNF428Q96B54 188 aa13.61□□□□□ -0.23
PTPN2-203ENST00000353319 DCCP43146 1447 aa13.61□□□□□ -0.23
PTPN2-203ENST00000353319 KDRP35968 1356 aa13.61□□□□□ -0.23
PTPN2-203ENST00000353319 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
PTPN2-203ENST00000353319 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
PTPN2-203ENST00000353319 TSR2Q969E8 191 aaKnown RBP13.6□□□□□ -0.23
PTPN2-203ENST00000353319 IFT57Q9NWB7 429 aa13.6□□□□□ -0.23
PTPN2-203ENST00000353319 RTL1A6NKG5 1358 aa13.6□□□□□ -0.23
PTPN2-203ENST00000353319 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
PTPN2-203ENST00000353319 KDM4FA0A1W2PPD8 638 aa13.59□□□□□ -0.23
PTPN2-203ENST00000353319 HOXC9P31274 260 aa13.59□□□□□ -0.23
PTPN2-203ENST00000353319 GNAI1P63096 354 aa13.59□□□□□ -0.23
PTPN2-203ENST00000353319 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
PTPN2-203ENST00000353319 C1orf167Q5SNV9 1468 aa13.59□□□□□ -0.23
PTPN2-203ENST00000353319 MST1RQ04912 1400 aa13.59□□□□□ -0.23
PTPN2-203ENST00000353319 KIF1AQ12756 1690 aa13.59□□□□□ -0.23
PTPN2-203ENST00000353319 AEBP1Q8IUX7 1158 aa13.59□□□□□ -0.23
PTPN2-203ENST00000353319 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
PTPN2-203ENST00000353319 DLG5Q8TDM6 1919 aa13.58□□□□□ -0.23
PTPN2-203ENST00000353319 BRPF1P55201 1214 aaPredicted RBP13.58□□□□□ -0.24
PTPN2-203ENST00000353319 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
PTPN2-203ENST00000353319 SOX12O15370 315 aa13.57□□□□□ -0.24
PTPN2-203ENST00000353319 MS4A1P11836 297 aa13.57□□□□□ -0.24
PTPN2-203ENST00000353319 ALDH1L2Q3SY69 923 aa13.57□□□□□ -0.24
PTPN2-203ENST00000353319 IP6K1Q92551 441 aa13.57□□□□□ -0.24
PTPN2-203ENST00000353319 EYA1Q99502 592 aa13.57□□□□□ -0.24
PTPN2-203ENST00000353319 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
PTPN2-203ENST00000353319 TMEM94Q12767 1356 aa13.57□□□□□ -0.24
PTPN2-203ENST00000353319 STRCP1A6NGW2 1772 aa13.57□□□□□ -0.24
PTPN2-203ENST00000353319 FOXO3O43524 673 aa13.56□□□□□ -0.24
PTPN2-203ENST00000353319 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
PTPN2-203ENST00000353319 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
PTPN2-203ENST00000353319 NFAT5O94916 1531 aa13.56□□□□□ -0.24
PTPN2-203ENST00000353319 PHRF1Q9P1Y6 1649 aaKnown RBP13.56□□□□□ -0.24
PTPN2-203ENST00000353319 KDM2BQ8NHM5 1336 aa13.56□□□□□ -0.24
PTPN2-203ENST00000353319 ATF3P18847 181 aa13.55□□□□□ -0.24
PTPN2-203ENST00000353319 CANXP27824 592 aaKnown RBP13.55□□□□□ -0.24
PTPN2-203ENST00000353319 ZKSCAN2Q63HK3 967 aa13.55□□□□□ -0.24
PTPN2-203ENST00000353319 LMTK3Q96Q04 1460 aa13.55□□□□□ -0.24
PTPN2-203ENST00000353319 SLIT3O75094 1523 aa13.55□□□□□ -0.24
PTPN2-203ENST00000353319 TRPM3Q9HCF6 1732 aaPredicted RBP13.55□□□□□ -0.24
PTPN2-203ENST00000353319 HSPA2P54652 639 aa13.54□□□□□ -0.24
PTPN2-203ENST00000353319 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
PTPN2-203ENST00000353319 KRT28Q7Z3Y7 464 aa13.54□□□□□ -0.24
PTPN2-203ENST00000353319 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
PTPN2-203ENST00000353319 SSH1Q8WYL5 1049 aa13.54□□□□□ -0.24
PTPN2-203ENST00000353319 FRAT1Q92837 279 aaPredicted RBP13.54□□□□□ -0.24
PTPN2-203ENST00000353319 HTATSF1O43719 755 aaKnown RBP13.54□□□□□ -0.24
PTPN2-203ENST00000353319 VAMP4O75379 141 aa13.54□□□□□ -0.24
PTPN2-203ENST00000353319 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
PTPN2-203ENST00000353319 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
PTPN2-203ENST00000353319 USP19O94966 1318 aa13.53□□□□□ -0.24
PTPN2-203ENST00000353319 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
PTPN2-203ENST00000353319 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
PTPN2-203ENST00000353319 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
PTPN2-203ENST00000353319 SMC4Q9NTJ3 1288 aa13.53□□□□□ -0.24
PTPN2-203ENST00000353319 STRCQ7RTU9 1775 aa13.52□□□□□ -0.24
PTPN2-203ENST00000353319 FAM83GA6ND36 823 aa13.52□□□□□ -0.25
PTPN2-203ENST00000353319 CHL1O00533 1208 aa13.52□□□□□ -0.25
PTPN2-203ENST00000353319 TCERG1O14776 1098 aaKnown RBP13.52□□□□□ -0.25
PTPN2-203ENST00000353319 IPO8O15397 1037 aaKnown RBP13.52□□□□□ -0.25
PTPN2-203ENST00000353319 GCP02774 474 aa13.52□□□□□ -0.25
PTPN2-203ENST00000353319 ARHGEF25Q86VW2 580 aa13.52□□□□□ -0.25
PTPN2-203ENST00000353319 COG6Q9Y2V7 657 aa13.52□□□□□ -0.25
PTPN2-203ENST00000353319 LTN1O94822 1766 aa13.52□□□□□ -0.25
PTPN2-203ENST00000353319 MTHFSDQ2M296 383 aaKnown RBP13.51□□□□□ -0.25
PTPN2-203ENST00000353319 DZIP1LQ8IYY4 767 aaKnown RBP13.51□□□□□ -0.25
PTPN2-203ENST00000353319 CLUAP1Q96AJ1 413 aa13.51□□□□□ -0.25
PTPN2-203ENST00000353319 BCL2L13Q9BXK5 485 aa13.51□□□□□ -0.25
PTPN2-203ENST00000353319 LAS1LQ9Y4W2 734 aaKnown RBP13.51□□□□□ -0.25
PTPN2-203ENST00000353319 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
PTPN2-203ENST00000353319 RLBP1P12271 317 aa13.5□□□□□ -0.25
PTPN2-203ENST00000353319 HAP1P54257 671 aaPredicted RBP13.5□□□□□ -0.25
PTPN2-203ENST00000353319 ATF7IPQ6VMQ6 1270 aa13.5□□□□□ -0.25
PTPN2-203ENST00000353319 ARHGAP45Q92619 1136 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms