RNA–Protein interactions for RNA: ENST00000349258.8

THSD1-202, Transcript of thrombospondin type 1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene THSD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-202ENST00000349258 UBR1Q8IWV7 1749 aa21.33■■□□□ 1.01
THSD1-202ENST00000349258 ATF7IPQ6VMQ6 1270 aa21.33■■□□□ 1
THSD1-202ENST00000349258 SIRT1Q96EB6 747 aa21.33■■□□□ 1
THSD1-202ENST00000349258 FAM161AQ3B820 660 aa21.32■■□□□ 1
THSD1-202ENST00000349258 LRRC7Q96NW7 1537 aa21.32■■□□□ 1
THSD1-202ENST00000349258 AMPHP49418 695 aa21.32■■□□□ 1
THSD1-202ENST00000349258 KRT24Q2M2I5 525 aa21.32■■□□□ 1
THSD1-202ENST00000349258 MBIPQ9NS73 344 aa21.31■■□□□ 1
THSD1-202ENST00000349258 MIS18AQ9NYP9 233 aa21.31■■□□□ 1
THSD1-202ENST00000349258 TBX22Q9Y458 520 aa21.31■■□□□ 1
THSD1-202ENST00000349258 C8orf34Q49A92 452 aa21.3■■□□□ 1
THSD1-202ENST00000349258 KIF20BQ96Q89 1820 aa21.29■■□□□ 1
THSD1-202ENST00000349258 C1orf115Q9H7X2 142 aa21.29■■□□□ 1
THSD1-202ENST00000349258 PDZRN3Q9UPQ7 1066 aa21.29■■□□□ 1
THSD1-202ENST00000349258 TECPR2O15040 1411 aa21.29■■□□□ 1
THSD1-202ENST00000349258 FOXO3O43524 673 aa21.28■■□□□ 1
THSD1-202ENST00000349258 PLEKHG3A1L390 1219 aa21.28■■□□□ 1
THSD1-202ENST00000349258 LMOD2Q6P5Q4 547 aa21.28■■□□□ 1
THSD1-202ENST00000349258 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
THSD1-202ENST00000349258 RWDD1Q9H446 243 aaPredicted RBP21.28■■□□□ 1
THSD1-202ENST00000349258 DAXXQ9UER7 740 aaPredicted RBP21.27■■□□□ 1
THSD1-202ENST00000349258 XPCQ01831 940 aaPredicted RBP21.27■■□□□ 1
THSD1-202ENST00000349258 MAP3K19Q56UN5 1328 aa21.26■□□□□ 0.99
THSD1-202ENST00000349258 GNAI1P63096 354 aa21.26■□□□□ 0.99
THSD1-202ENST00000349258 ABTB2Q8N961 1025 aa21.26■□□□□ 0.99
THSD1-202ENST00000349258 TWISTNBQ3B726 338 aaPredicted RBP21.26■□□□□ 0.99
THSD1-202ENST00000349258 IL16Q14005 1332 aa21.26■□□□□ 0.99
THSD1-202ENST00000349258 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.26■□□□□ 0.99
THSD1-202ENST00000349258 ADGRB2O60241 1585 aa21.25■□□□□ 0.99
THSD1-202ENST00000349258 CDC42BPGQ6DT37 1551 aa21.25■□□□□ 0.99
THSD1-202ENST00000349258 IPO8O15397 1037 aaKnown RBP21.25■□□□□ 0.99
THSD1-202ENST00000349258 VAMP4O75379 141 aa21.24■□□□□ 0.99
THSD1-202ENST00000349258 USP6P35125 1406 aa21.24■□□□□ 0.99
THSD1-202ENST00000349258 DDX19BQ9UMR2 479 aa21.24■□□□□ 0.99
THSD1-202ENST00000349258 SEC24BO95487 1268 aa21.23■□□□□ 0.99
THSD1-202ENST00000349258 CT47B1P0C2W7 299 aaPredicted RBP21.23■□□□□ 0.99
THSD1-202ENST00000349258 ANKLE2Q86XL3 938 aa21.23■□□□□ 0.99
THSD1-202ENST00000349258 ANKRD26Q9UPS8 1709 aa21.23■□□□□ 0.99
THSD1-202ENST00000349258 AATKQ6ZMQ8 1374 aa21.23■□□□□ 0.99
THSD1-202ENST00000349258 CALD1Q05682 793 aaKnown RBP21.22■□□□□ 0.99
THSD1-202ENST00000349258 KIF16BQ96L93 1317 aa21.22■□□□□ 0.99
THSD1-202ENST00000349258 C3P01024 1663 aa21.21■□□□□ 0.99
THSD1-202ENST00000349258 ESCO1Q5FWF5 840 aa21.21■□□□□ 0.99
THSD1-202ENST00000349258 USHBP1Q8N6Y0 703 aa21.21■□□□□ 0.99
THSD1-202ENST00000349258 LMOD3Q0VAK6 560 aa21.2■□□□□ 0.98
THSD1-202ENST00000349258 IFT57Q9NWB7 429 aa21.2■□□□□ 0.98
THSD1-202ENST00000349258 NCBP3Q53F19 620 aaKnown RBP21.2■□□□□ 0.98
THSD1-202ENST00000349258 CFAP44Q96MT7 982 aa21.2■□□□□ 0.98
THSD1-202ENST00000349258 CDK12Q9NYV4 1490 aaPredicted RBP21.2■□□□□ 0.98
THSD1-202ENST00000349258 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.2■□□□□ 0.98
THSD1-202ENST00000349258 NECTIN2Q92692 538 aa21.19■□□□□ 0.98
THSD1-202ENST00000349258 RTF1Q92541 710 aaKnown RBP21.17■□□□□ 0.98
THSD1-202ENST00000349258 FER1L4A9Z1Z3 1794 aa21.17■□□□□ 0.98
THSD1-202ENST00000349258 EYA1Q99502 592 aa21.17■□□□□ 0.98
THSD1-202ENST00000349258 LNPKQ9C0E8 428 aa21.17■□□□□ 0.98
THSD1-202ENST00000349258 MTHFSDQ2M296 383 aaKnown RBP21.16■□□□□ 0.98
THSD1-202ENST00000349258 MRPL50Q8N5N7 158 aaKnown RBP21.16■□□□□ 0.98
THSD1-202ENST00000349258 PSME1Q06323 249 aa21.15■□□□□ 0.98
THSD1-202ENST00000349258 ALDH1L2Q3SY69 923 aa21.15■□□□□ 0.98
THSD1-202ENST00000349258 ZBTB40Q9NUA8 1239 aa21.14■□□□□ 0.97
THSD1-202ENST00000349258 PHF8Q9UPP1 1060 aa21.14■□□□□ 0.97
THSD1-202ENST00000349258 DEKP35659 375 aaKnown RBP21.13■□□□□ 0.97
THSD1-202ENST00000349258 ITSN1Q15811 1721 aa21.13■□□□□ 0.97
THSD1-202ENST00000349258 OVOS2A0A0J9YW53 1432 aa21.13■□□□□ 0.97
THSD1-202ENST00000349258 OVOS2Q6IE36 1432 aa21.13■□□□□ 0.97
THSD1-202ENST00000349258 APBB1O00213 710 aa21.13■□□□□ 0.97
THSD1-202ENST00000349258 ZNF853P0CG23 659 aa21.13■□□□□ 0.97
THSD1-202ENST00000349258 RTL5Q5HYW3 569 aaPredicted RBP21.13■□□□□ 0.97
THSD1-202ENST00000349258 DDRGK1Q96HY6 314 aa21.12■□□□□ 0.97
THSD1-202ENST00000349258 TSPYL4Q9UJ04 414 aa21.11■□□□□ 0.97
THSD1-202ENST00000349258 TTC21AQ8NDW8 1320 aa21.11■□□□□ 0.97
THSD1-202ENST00000349258 ORAI2Q96SN7 254 aa21.11■□□□□ 0.97
THSD1-202ENST00000349258 KNDC1Q76NI1 1749 aa21.11■□□□□ 0.97
THSD1-202ENST00000349258 ARHGAP23Q9P227 1491 aa21.11■□□□□ 0.97
THSD1-202ENST00000349258 SLC4A10Q6U841 1118 aa21.1■□□□□ 0.97
THSD1-202ENST00000349258 ANKRD45Q5TZF3 282 aa21.1■□□□□ 0.97
THSD1-202ENST00000349258 MON2Q7Z3U7 1717 aa21.09■□□□□ 0.97
THSD1-202ENST00000349258 RGPD8O14715 1765 aaPredicted RBP21.09■□□□□ 0.97
THSD1-202ENST00000349258 SLIT1O75093 1534 aa21.09■□□□□ 0.97
THSD1-202ENST00000349258 AAMPQ13685 434 aa21.09■□□□□ 0.97
THSD1-202ENST00000349258 DIP2AQ14689 1571 aa21.08■□□□□ 0.97
THSD1-202ENST00000349258 FLT4P35916 1363 aa21.08■□□□□ 0.97
THSD1-202ENST00000349258 SETD1BQ9UPS6 1966 aaKnown RBP21.08■□□□□ 0.96
THSD1-202ENST00000349258 SLC4A2P04920 1241 aa21.07■□□□□ 0.96
THSD1-202ENST00000349258 HOXC9P31274 260 aa21.07■□□□□ 0.96
THSD1-202ENST00000349258 MFAP1P55081 439 aaKnown RBP21.07■□□□□ 0.96
THSD1-202ENST00000349258 ZBTB7BO15156 539 aaPredicted RBP21.07■□□□□ 0.96
THSD1-202ENST00000349258 SPRYD3Q8NCJ5 442 aa21.05■□□□□ 0.96
THSD1-202ENST00000349258 UPF2Q9HAU5 1272 aaKnown RBP21.05■□□□□ 0.96
THSD1-202ENST00000349258 PTCH1Q13635 1447 aa21.05■□□□□ 0.96
THSD1-202ENST00000349258 AKAP12Q02952 1782 aa21.05■□□□□ 0.96
THSD1-202ENST00000349258 F6X3S4 739 aa21.05■□□□□ 0.96
THSD1-202ENST00000349258 SBNO1A3KN83 1393 aa21.05■□□□□ 0.96
THSD1-202ENST00000349258 RIMS1Q86UR5 1692 aaKnown RBP21.05■□□□□ 0.96
THSD1-202ENST00000349258 CHL1O00533 1208 aa21.04■□□□□ 0.96
THSD1-202ENST00000349258 HDAC1Q13547 482 aaPredicted RBP21.04■□□□□ 0.96
THSD1-202ENST00000349258 USP31Q70CQ4 1352 aa21.04■□□□□ 0.96
THSD1-202ENST00000349258 PROSER2Q86WR7 435 aaPredicted RBP21.03■□□□□ 0.96
THSD1-202ENST00000349258 LRRC59Q96AG4 307 aaKnown RBP21.03■□□□□ 0.96
THSD1-202ENST00000349258 ZNF428Q96B54 188 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms