RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 FAM161AQ3B820 660 aa27.34■■□□□ 1.97
PTPN18-202ENST00000347849 FRAT1Q92837 279 aaPredicted RBP27.34■■□□□ 1.97
PTPN18-202ENST00000347849 SSH2Q76I76 1423 aa27.34■■□□□ 1.97
PTPN18-202ENST00000347849 PANK1Q8TE04 598 aa27.34■■□□□ 1.97
PTPN18-202ENST00000347849 RGPD8O14715 1765 aaPredicted RBP27.33■■□□□ 1.97
PTPN18-202ENST00000347849 OVOS2A0A0J9YW53 1432 aa27.33■■□□□ 1.97
PTPN18-202ENST00000347849 OVOS2Q6IE36 1432 aa27.33■■□□□ 1.97
PTPN18-202ENST00000347849 GSE1Q14687 1217 aa27.33■■□□□ 1.97
PTPN18-202ENST00000347849 C8orf34Q49A92 452 aa27.32■■□□□ 1.96
PTPN18-202ENST00000347849 NGDNQ8NEJ9 315 aaKnown RBP27.31■■□□□ 1.96
PTPN18-202ENST00000347849 RGS3P49796 1198 aa27.31■■□□□ 1.96
PTPN18-202ENST00000347849 EXOSC9Q06265 439 aaKnown RBP27.31■■□□□ 1.96
PTPN18-202ENST00000347849 PNNQ9H307 717 aaKnown RBP27.3■■□□□ 1.96
PTPN18-202ENST00000347849 THUMPD2Q9BTF0 503 aaKnown RBP27.29■■□□□ 1.96
PTPN18-202ENST00000347849 CANXP27824 592 aaKnown RBP27.28■■□□□ 1.96
PTPN18-202ENST00000347849 COG6Q9Y2V7 657 aa27.28■■□□□ 1.96
PTPN18-202ENST00000347849 PIK3R4Q99570 1358 aa27.28■■□□□ 1.96
PTPN18-202ENST00000347849 HSP90AB2PQ58FF8 381 aa27.27■■□□□ 1.96
PTPN18-202ENST00000347849 RLBP1P12271 317 aa27.27■■□□□ 1.96
PTPN18-202ENST00000347849 EIF4A2Q14240 407 aaKnown RBP27.27■■□□□ 1.96
PTPN18-202ENST00000347849 AEBP1Q8IUX7 1158 aa27.26■■□□□ 1.95
PTPN18-202ENST00000347849 PDE3AQ14432 1141 aa27.26■■□□□ 1.95
PTPN18-202ENST00000347849 NFE2L2Q16236 605 aa27.25■■□□□ 1.95
PTPN18-202ENST00000347849 ZNF142P52746 1687 aaPredicted RBP27.25■■□□□ 1.95
PTPN18-202ENST00000347849 BRPF3Q9ULD4 1205 aa27.24■■□□□ 1.95
PTPN18-202ENST00000347849 USP31Q70CQ4 1352 aa27.23■■□□□ 1.95
PTPN18-202ENST00000347849 IL16Q14005 1332 aa27.23■■□□□ 1.95
PTPN18-202ENST00000347849 NUTM2GQ5VZR2 741 aa27.23■■□□□ 1.95
PTPN18-202ENST00000347849 CLUAP1Q96AJ1 413 aa27.23■■□□□ 1.95
PTPN18-202ENST00000347849 PEAK1Q9H792 1746 aa27.22■■□□□ 1.95
PTPN18-202ENST00000347849 MAP3K19Q56UN5 1328 aa27.2■■□□□ 1.95
PTPN18-202ENST00000347849 TTC21AQ8NDW8 1320 aa27.2■■□□□ 1.95
PTPN18-202ENST00000347849 SULT6B1Q6IMI4 303 aa27.19■■□□□ 1.94
PTPN18-202ENST00000347849 CHD2O14647 1828 aaKnown RBP27.19■■□□□ 1.94
PTPN18-202ENST00000347849 FAM83GA6ND36 823 aa27.19■■□□□ 1.94
PTPN18-202ENST00000347849 SSH1Q8WYL5 1049 aa27.19■■□□□ 1.94
PTPN18-202ENST00000347849 NALCNQ8IZF0 1738 aa27.19■■□□□ 1.94
PTPN18-202ENST00000347849 ANKARQ7Z5J8 1434 aa27.18■■□□□ 1.94
PTPN18-202ENST00000347849 SETD1BQ9UPS6 1966 aaKnown RBP27.18■■□□□ 1.94
PTPN18-202ENST00000347849 FMN2Q9NZ56 1722 aa27.17■■□□□ 1.94
PTPN18-202ENST00000347849 IGHDP01880 384 aa27.16■■□□□ 1.94
PTPN18-202ENST00000347849 DCTN1Q14203 1278 aa27.16■■□□□ 1.94
PTPN18-202ENST00000347849 NLRP6P59044 892 aa27.16■■□□□ 1.94
PTPN18-202ENST00000347849 SMC4Q9NTJ3 1288 aa27.15■■□□□ 1.94
PTPN18-202ENST00000347849 PIK3C2AO00443 1686 aa27.15■■□□□ 1.94
PTPN18-202ENST00000347849 FRAT2O75474 233 aaPredicted RBP27.15■■□□□ 1.94
PTPN18-202ENST00000347849 NPHP4O75161 1426 aaPredicted RBP27.14■■□□□ 1.94
PTPN18-202ENST00000347849 CT47B1P0C2W7 299 aaPredicted RBP27.13■■□□□ 1.93
PTPN18-202ENST00000347849 PHF8Q9UPP1 1060 aa27.11■■□□□ 1.93
PTPN18-202ENST00000347849 ZKSCAN2Q63HK3 967 aa27.1■■□□□ 1.93
PTPN18-202ENST00000347849 TSPYL6Q8N831 410 aa27.1■■□□□ 1.93
PTPN18-202ENST00000347849 ABTB2Q8N961 1025 aa27.1■■□□□ 1.93
PTPN18-202ENST00000347849 TRIM27P14373 513 aa27.09■■□□□ 1.93
PTPN18-202ENST00000347849 MBIPQ9NS73 344 aa27.09■■□□□ 1.93
PTPN18-202ENST00000347849 ZNF853P0CG23 659 aa27.08■■□□□ 1.93
PTPN18-202ENST00000347849 NOB1Q9ULX3 412 aaKnown RBP27.08■■□□□ 1.93
PTPN18-202ENST00000347849 PCDHB15Q9Y5E8 787 aa27.08■■□□□ 1.93
PTPN18-202ENST00000347849 ELL2O00472 640 aaPredicted RBP27.08■■□□□ 1.93
PTPN18-202ENST00000347849 DLG5Q8TDM6 1919 aa27.07■■□□□ 1.92
PTPN18-202ENST00000347849 AMPHP49418 695 aa27.07■■□□□ 1.92
PTPN18-202ENST00000347849 ESCO1Q5FWF5 840 aa27.07■■□□□ 1.92
PTPN18-202ENST00000347849 C14orf37Q86TY3 774 aa27.07■■□□□ 1.92
PTPN18-202ENST00000347849 SBNO1A3KN83 1393 aa27.07■■□□□ 1.92
PTPN18-202ENST00000347849 ADGRL3Q9HAR2 1447 aa27.06■■□□□ 1.92
PTPN18-202ENST00000347849 FLT4P35916 1363 aa27.06■■□□□ 1.92
PTPN18-202ENST00000347849 DZIP1LQ8IYY4 767 aaKnown RBP27.06■■□□□ 1.92
PTPN18-202ENST00000347849 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.06■■□□□ 1.92
PTPN18-202ENST00000347849 IFT57Q9NWB7 429 aa27.05■■□□□ 1.92
PTPN18-202ENST00000347849 RGPD1P0DJD0 1748 aa27.05■■□□□ 1.92
PTPN18-202ENST00000347849 MARF1Q9Y4F3 1742 aaKnown RBP27.04■■□□□ 1.92
PTPN18-202ENST00000347849 GNAI1P63096 354 aa27.04■■□□□ 1.92
PTPN18-202ENST00000347849 MVPQ14764 893 aaKnown RBP27.04■■□□□ 1.92
PTPN18-202ENST00000347849 VAMP4O75379 141 aa27.03■■□□□ 1.92
PTPN18-202ENST00000347849 MCM10Q7L590 875 aa27.03■■□□□ 1.92
PTPN18-202ENST00000347849 FTSJ3Q8IY81 847 aaKnown RBP27.03■■□□□ 1.92
PTPN18-202ENST00000347849 ORAI2Q96SN7 254 aa27.03■■□□□ 1.92
PTPN18-202ENST00000347849 EYA1Q99502 592 aa27.03■■□□□ 1.92
PTPN18-202ENST00000347849 FOXO3O43524 673 aa27.02■■□□□ 1.92
PTPN18-202ENST00000347849 ATF7IPQ6VMQ6 1270 aa27.02■■□□□ 1.92
PTPN18-202ENST00000347849 CFAP44Q96MT7 982 aa27.02■■□□□ 1.92
PTPN18-202ENST00000347849 C8orf58Q8NAV2 365 aa27.01■■□□□ 1.92
PTPN18-202ENST00000347849 CALD1Q05682 793 aaKnown RBP27.01■■□□□ 1.91
PTPN18-202ENST00000347849 USP19O94966 1318 aa27.01■■□□□ 1.91
PTPN18-202ENST00000347849 SEC24BO95487 1268 aa27■■□□□ 1.91
PTPN18-202ENST00000347849 XPCQ01831 940 aaPredicted RBP27■■□□□ 1.91
PTPN18-202ENST00000347849 LMOD3Q0VAK6 560 aa27■■□□□ 1.91
PTPN18-202ENST00000347849 HOXC9P31274 260 aa27■■□□□ 1.91
PTPN18-202ENST00000347849 ARHGEF10O15013 1369 aa26.98■■□□□ 1.91
PTPN18-202ENST00000347849 PSME1Q06323 249 aa26.98■■□□□ 1.91
PTPN18-202ENST00000347849 MTHFSDQ2M296 383 aaKnown RBP26.97■■□□□ 1.91
PTPN18-202ENST00000347849 ALDH1L2Q3SY69 923 aa26.97■■□□□ 1.91
PTPN18-202ENST00000347849 TMEM57Q8N5G2 664 aa26.97■■□□□ 1.91
PTPN18-202ENST00000347849 LTV1Q96GA3 475 aaPredicted RBP26.97■■□□□ 1.91
PTPN18-202ENST00000347849 KRT24Q2M2I5 525 aa26.97■■□□□ 1.91
PTPN18-202ENST00000347849 PLEKHG5O94827 1062 aa26.96■■□□□ 1.91
PTPN18-202ENST00000347849 IGSF1Q8N6C5 1336 aa26.96■■□□□ 1.91
PTPN18-202ENST00000347849 ITPRIPQ8IWB1 547 aa26.96■■□□□ 1.91
PTPN18-202ENST00000347849 PROSER2Q86WR7 435 aaPredicted RBP26.95■■□□□ 1.91
PTPN18-202ENST00000347849 TWISTNBQ3B726 338 aaPredicted RBP26.95■■□□□ 1.9
PTPN18-202ENST00000347849 KDRP35968 1356 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms