RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 TMEM94Q12767 1356 aa18.99■□□□□ 0.63
PBX3-201ENST00000342287 PSME1Q06323 249 aa18.99■□□□□ 0.63
PBX3-201ENST00000342287 CCDC27Q2M243 656 aa18.99■□□□□ 0.63
PBX3-201ENST00000342287 DUSP27Q5VZP5 1158 aa18.99■□□□□ 0.63
PBX3-201ENST00000342287 RRP7AQ9Y3A4 280 aaKnown RBP18.98■□□□□ 0.63
PBX3-201ENST00000342287 E9PSI1 815 aa18.98■□□□□ 0.63
PBX3-201ENST00000342287 ABTB2Q8N961 1025 aa18.98■□□□□ 0.63
PBX3-201ENST00000342287 MAPK8IP3Q9UPT6 1336 aa18.98■□□□□ 0.63
PBX3-201ENST00000342287 TRMT2AQ8IZ69 625 aaKnown RBP18.98■□□□□ 0.63
PBX3-201ENST00000342287 ORAI2Q96SN7 254 aa18.98■□□□□ 0.63
PBX3-201ENST00000342287 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
PBX3-201ENST00000342287 FGD1P98174 961 aa18.97■□□□□ 0.63
PBX3-201ENST00000342287 ATF3P18847 181 aa18.97■□□□□ 0.63
PBX3-201ENST00000342287 GSE1Q14687 1217 aa18.97■□□□□ 0.63
PBX3-201ENST00000342287 PIK3C2AO00443 1686 aa18.96■□□□□ 0.63
PBX3-201ENST00000342287 WDR63Q8IWG1 891 aa18.95■□□□□ 0.62
PBX3-201ENST00000342287 SOX12O15370 315 aa18.95■□□□□ 0.62
PBX3-201ENST00000342287 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
PBX3-201ENST00000342287 STRCP1A6NGW2 1772 aa18.95■□□□□ 0.62
PBX3-201ENST00000342287 STRCQ7RTU9 1775 aa18.94■□□□□ 0.62
PBX3-201ENST00000342287 SPINK5Q9NQ38 1064 aaPredicted RBP18.94■□□□□ 0.62
PBX3-201ENST00000342287 C1orf167Q5SNV9 1468 aa18.94■□□□□ 0.62
PBX3-201ENST00000342287 DCCP43146 1447 aa18.94■□□□□ 0.62
PBX3-201ENST00000342287 TMPOP42166 694 aaKnown RBP18.94■□□□□ 0.62
PBX3-201ENST00000342287 AAMPQ13685 434 aa18.93■□□□□ 0.62
PBX3-201ENST00000342287 NUTM2GQ5VZR2 741 aa18.93■□□□□ 0.62
PBX3-201ENST00000342287 MAP3K19Q56UN5 1328 aa18.93■□□□□ 0.62
PBX3-201ENST00000342287 FOXO3O43524 673 aa18.93■□□□□ 0.62
PBX3-201ENST00000342287 PRKAR2BP31323 418 aa18.93■□□□□ 0.62
PBX3-201ENST00000342287 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
PBX3-201ENST00000342287 HMOX1P09601 288 aa18.92■□□□□ 0.62
PBX3-201ENST00000342287 EIF4A2Q14240 407 aaKnown RBP18.92■□□□□ 0.62
PBX3-201ENST00000342287 CADPS2Q86UW7 1296 aa18.92■□□□□ 0.62
PBX3-201ENST00000342287 FAM43AQ8N2R8 423 aa18.92■□□□□ 0.62
PBX3-201ENST00000342287 SBNO1A3KN83 1393 aa18.91■□□□□ 0.62
PBX3-201ENST00000342287 HSP90AB2PQ58FF8 381 aa18.91■□□□□ 0.62
PBX3-201ENST00000342287 RRP1P56182 461 aaKnown RBP18.91■□□□□ 0.62
PBX3-201ENST00000342287 AMPHP49418 695 aa18.9■□□□□ 0.62
PBX3-201ENST00000342287 USP54Q70EL1 1684 aa18.9■□□□□ 0.62
PBX3-201ENST00000342287 LRRC7Q96NW7 1537 aa18.9■□□□□ 0.62
PBX3-201ENST00000342287 FLT4P35916 1363 aa18.9■□□□□ 0.62
PBX3-201ENST00000342287 HSP90AA2PQ14568 343 aaPredicted RBP18.9■□□□□ 0.62
PBX3-201ENST00000342287 MSH6P52701 1360 aa18.9■□□□□ 0.62
PBX3-201ENST00000342287 RIPK4P57078 832 aa18.89■□□□□ 0.62
PBX3-201ENST00000342287 MST1RQ04912 1400 aa18.89■□□□□ 0.61
PBX3-201ENST00000342287 KIF24Q5T7B8 1368 aa18.89■□□□□ 0.61
PBX3-201ENST00000342287 KRT28Q7Z3Y7 464 aa18.88■□□□□ 0.61
PBX3-201ENST00000342287 TRIM35Q9UPQ4 493 aa18.88■□□□□ 0.61
PBX3-201ENST00000342287 PEAK1Q9H792 1746 aa18.88■□□□□ 0.61
PBX3-201ENST00000342287 KIF1AQ12756 1690 aa18.87■□□□□ 0.61
PBX3-201ENST00000342287 FRAT1Q92837 279 aaPredicted RBP18.87■□□□□ 0.61
PBX3-201ENST00000342287 PHACTR3Q96KR7 559 aa18.87■□□□□ 0.61
PBX3-201ENST00000342287 XPCQ01831 940 aaPredicted RBP18.86■□□□□ 0.61
PBX3-201ENST00000342287 KCNH5Q8NCM2 988 aa18.86■□□□□ 0.61
PBX3-201ENST00000342287 MYH16Q9H6N6 1097 aa18.86■□□□□ 0.61
PBX3-201ENST00000342287 MARF1Q9Y4F3 1742 aaKnown RBP18.85■□□□□ 0.61
PBX3-201ENST00000342287 ZNF335Q9H4Z2 1342 aaPredicted RBP18.85■□□□□ 0.61
PBX3-201ENST00000342287 NFE2L2Q16236 605 aa18.85■□□□□ 0.61
PBX3-201ENST00000342287 SULT6B1Q6IMI4 303 aa18.84■□□□□ 0.61
PBX3-201ENST00000342287 HOXC9P31274 260 aa18.84■□□□□ 0.61
PBX3-201ENST00000342287 IL16Q14005 1332 aa18.83■□□□□ 0.6
PBX3-201ENST00000342287 PDIA4P13667 645 aaKnown RBP18.83■□□□□ 0.6
PBX3-201ENST00000342287 BCL11BQ9C0K0 894 aaPredicted RBP18.82■□□□□ 0.6
PBX3-201ENST00000342287 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
PBX3-201ENST00000342287 AEBP1Q8IUX7 1158 aa18.81■□□□□ 0.6
PBX3-201ENST00000342287 ARHGEF10O15013 1369 aa18.81■□□□□ 0.6
PBX3-201ENST00000342287 RTL1A6NKG5 1358 aa18.81■□□□□ 0.6
PBX3-201ENST00000342287 NPHP3Q7Z494 1330 aa18.8■□□□□ 0.6
PBX3-201ENST00000342287 GCP02774 474 aa18.8■□□□□ 0.6
PBX3-201ENST00000342287 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.79■□□□□ 0.6
PBX3-201ENST00000342287 IP6K1Q92551 441 aa18.79■□□□□ 0.6
PBX3-201ENST00000342287 TRPM3Q9HCF6 1732 aaPredicted RBP18.79■□□□□ 0.6
PBX3-201ENST00000342287 NFAT5O94916 1531 aa18.79■□□□□ 0.6
PBX3-201ENST00000342287 XIRP1Q702N8 1843 aaKnown RBP18.79■□□□□ 0.6
PBX3-201ENST00000342287 LMOD3Q0VAK6 560 aa18.79■□□□□ 0.6
PBX3-201ENST00000342287 RGPD1P0DJD0 1748 aa18.79■□□□□ 0.6
PBX3-201ENST00000342287 PLIN1O60240 522 aa18.78■□□□□ 0.6
PBX3-201ENST00000342287 CALD1Q05682 793 aaKnown RBP18.78■□□□□ 0.6
PBX3-201ENST00000342287 EYA1Q99502 592 aa18.78■□□□□ 0.6
PBX3-201ENST00000342287 USP19O94966 1318 aa18.78■□□□□ 0.6
PBX3-201ENST00000342287 IGSF1Q8N6C5 1336 aa18.78■□□□□ 0.6
PBX3-201ENST00000342287 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
PBX3-201ENST00000342287 RRP9O43818 475 aaKnown RBP18.76■□□□□ 0.59
PBX3-201ENST00000342287 KDRP35968 1356 aa18.76■□□□□ 0.59
PBX3-201ENST00000342287 SLIT3O75094 1523 aa18.76■□□□□ 0.59
PBX3-201ENST00000342287 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
PBX3-201ENST00000342287 NAP1L5Q96NT1 182 aaPredicted RBP18.76■□□□□ 0.59
PBX3-201ENST00000342287 SLAIN2Q9P270 581 aa18.76■□□□□ 0.59
PBX3-201ENST00000342287 HSP90AA1P07900 732 aaKnown RBP18.75■□□□□ 0.59
PBX3-201ENST00000342287 CT47B1P0C2W7 299 aaPredicted RBP18.75■□□□□ 0.59
PBX3-201ENST00000342287 BRINP3Q76B58 766 aa18.75■□□□□ 0.59
PBX3-201ENST00000342287 ARHGEF25Q86VW2 580 aa18.75■□□□□ 0.59
PBX3-201ENST00000342287 TSR2Q969E8 191 aaKnown RBP18.74■□□□□ 0.59
PBX3-201ENST00000342287 BCAR3O75815 825 aa18.74■□□□□ 0.59
PBX3-201ENST00000342287 LTV1Q96GA3 475 aaPredicted RBP18.74■□□□□ 0.59
PBX3-201ENST00000342287 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
PBX3-201ENST00000342287 EXOC6Q8TAG9 804 aa18.73■□□□□ 0.59
PBX3-201ENST00000342287 LTN1O94822 1766 aa18.73■□□□□ 0.59
PBX3-201ENST00000342287 RARSP54136 660 aaKnown RBP18.72■□□□□ 0.59
PBX3-201ENST00000342287 ALS2Q96Q42 1657 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms