RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 RALGAPBQ86X10 1494 aa23.23■■□□□ 1.31
SH2B3-201ENST00000341259 FAM177BA6PVY3 158 aa23.23■■□□□ 1.31
SH2B3-201ENST00000341259 EMILIN1Q9Y6C2 1016 aa23.22■■□□□ 1.31
SH2B3-201ENST00000341259 CCDC27Q2M243 656 aa23.22■■□□□ 1.31
SH2B3-201ENST00000341259 DDX54Q8TDD1 881 aaKnown RBP23.22■■□□□ 1.31
SH2B3-201ENST00000341259 MIS18AQ9NYP9 233 aa23.22■■□□□ 1.31
SH2B3-201ENST00000341259 SASS6Q6UVJ0 657 aa23.21■■□□□ 1.31
SH2B3-201ENST00000341259 SIL1Q9H173 461 aa23.21■■□□□ 1.31
SH2B3-201ENST00000341259 DCTN1Q14203 1278 aa23.21■■□□□ 1.31
SH2B3-201ENST00000341259 KCNH5Q8NCM2 988 aa23.21■■□□□ 1.31
SH2B3-201ENST00000341259 NSD2O96028 1365 aa23.21■■□□□ 1.31
SH2B3-201ENST00000341259 TRAK2O60296 914 aa23.21■■□□□ 1.31
SH2B3-201ENST00000341259 CCDC73Q6ZRK6 1079 aa23.21■■□□□ 1.31
SH2B3-201ENST00000341259 RPAP2Q8IXW5 612 aaPredicted RBP23.21■■□□□ 1.31
SH2B3-201ENST00000341259 SSH1Q8WYL5 1049 aa23.21■■□□□ 1.31
SH2B3-201ENST00000341259 TBC1D2BQ9UPU7 963 aa23.21■■□□□ 1.31
SH2B3-201ENST00000341259 WDR62O43379 1518 aa23.2■■□□□ 1.3
SH2B3-201ENST00000341259 DHX16O60231 1041 aaKnown RBP23.2■■□□□ 1.3
SH2B3-201ENST00000341259 SAFBQ15424 915 aaKnown RBP eCLIP23.2■■□□□ 1.3
SH2B3-201ENST00000341259 ALDH1L2Q3SY69 923 aa23.2■■□□□ 1.3
SH2B3-201ENST00000341259 FYB1O15117 783 aa23.2■■□□□ 1.3
SH2B3-201ENST00000341259 HOOK1Q9UJC3 728 aaKnown RBP23.19■■□□□ 1.3
SH2B3-201ENST00000341259 MAP4K4O95819 1239 aaPredicted RBP23.19■■□□□ 1.3
SH2B3-201ENST00000341259 NOC3LQ8WTT2 800 aaKnown RBP23.19■■□□□ 1.3
SH2B3-201ENST00000341259 DUSP27Q5VZP5 1158 aa23.19■■□□□ 1.3
SH2B3-201ENST00000341259 TSR1Q2NL82 804 aaKnown RBP23.18■■□□□ 1.3
SH2B3-201ENST00000341259 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
SH2B3-201ENST00000341259 TPM2P07951 284 aa23.18■■□□□ 1.3
SH2B3-201ENST00000341259 PPP6R1Q9UPN7 881 aa23.18■■□□□ 1.3
SH2B3-201ENST00000341259 TPM1P09493 284 aa23.18■■□□□ 1.3
SH2B3-201ENST00000341259 TTC39AQ5SRH9 613 aa23.18■■□□□ 1.3
SH2B3-201ENST00000341259 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
SH2B3-201ENST00000341259 PRDM11Q9NQV5 511 aa23.17■■□□□ 1.3
SH2B3-201ENST00000341259 ZC3H6P61129 1189 aaKnown RBP23.17■■□□□ 1.3
SH2B3-201ENST00000341259 CCDC158Q5M9N0 1113 aa23.16■■□□□ 1.3
SH2B3-201ENST00000341259 CNNM1Q9NRU3 951 aa23.16■■□□□ 1.3
SH2B3-201ENST00000341259 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
SH2B3-201ENST00000341259 K7ELQ4 463 aaPredicted RBP23.15■■□□□ 1.3
SH2B3-201ENST00000341259 MRE11P49959 708 aa23.15■■□□□ 1.3
SH2B3-201ENST00000341259 ASXL2Q76L83 1435 aa23.14■■□□□ 1.3
SH2B3-201ENST00000341259 AACSQ86V21 672 aa23.14■■□□□ 1.29
SH2B3-201ENST00000341259 LRPPRCP42704 1394 aaKnown RBP23.14■■□□□ 1.29
SH2B3-201ENST00000341259 CCDC47Q96A33 483 aaKnown RBP23.14■■□□□ 1.29
SH2B3-201ENST00000341259 PRAG1Q86YV5 1406 aa23.14■■□□□ 1.29
SH2B3-201ENST00000341259 CAVIN1Q6NZI2 390 aaKnown RBP23.13■■□□□ 1.29
SH2B3-201ENST00000341259 PRPF40AO75400 957 aaKnown RBP23.13■■□□□ 1.29
SH2B3-201ENST00000341259 CEBPAP49715 358 aaPredicted RBP23.13■■□□□ 1.29
SH2B3-201ENST00000341259 NUP160Q12769 1436 aa23.12■■□□□ 1.29
SH2B3-201ENST00000341259 IL1RAPL2Q9NP60 686 aa23.12■■□□□ 1.29
SH2B3-201ENST00000341259 CYP46A1Q9Y6A2 500 aa23.12■■□□□ 1.29
SH2B3-201ENST00000341259 CWC22Q9HCG8 908 aaKnown RBP23.12■■□□□ 1.29
SH2B3-201ENST00000341259 NASPP49321 788 aaPredicted RBP23.11■■□□□ 1.29
SH2B3-201ENST00000341259 MBD3O95983 291 aa23.11■■□□□ 1.29
SH2B3-201ENST00000341259 USHBP1Q8N6Y0 703 aa23.11■■□□□ 1.29
SH2B3-201ENST00000341259 PDCP20941 246 aa23.11■■□□□ 1.29
SH2B3-201ENST00000341259 ANKRD20A12PQ8NF67 263 aa23.1■■□□□ 1.29
SH2B3-201ENST00000341259 PHF8Q9UPP1 1060 aa23.1■■□□□ 1.29
SH2B3-201ENST00000341259 ANKRD36BQ8N2N9 1353 aa23.1■■□□□ 1.29
SH2B3-201ENST00000341259 SART3Q15020 963 aaKnown RBP23.1■■□□□ 1.29
SH2B3-201ENST00000341259 ZNF592Q92610 1267 aa23.1■■□□□ 1.29
SH2B3-201ENST00000341259 A2MP01023 1474 aa23.09■■□□□ 1.29
SH2B3-201ENST00000341259 KDM4AO75164 1064 aa23.09■■□□□ 1.29
SH2B3-201ENST00000341259 TAF7Q15545 349 aaPredicted RBP23.09■■□□□ 1.29
SH2B3-201ENST00000341259 SKAP1Q86WV1 359 aa23.09■■□□□ 1.29
SH2B3-201ENST00000341259 TRAPPC8Q9Y2L5 1435 aa23.09■■□□□ 1.29
SH2B3-201ENST00000341259 WDR7Q9Y4E6 1490 aa23.08■■□□□ 1.29
SH2B3-201ENST00000341259 EXOC6BQ9Y2D4 811 aa23.08■■□□□ 1.29
SH2B3-201ENST00000341259 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.08■■□□□ 1.29
SH2B3-201ENST00000341259 BRMS1Q9HCU9 246 aa23.08■■□□□ 1.29
SH2B3-201ENST00000341259 RNF214Q8ND24 703 aa23.08■■□□□ 1.28
SH2B3-201ENST00000341259 CCDC57Q2TAC2 916 aa23.07■■□□□ 1.28
SH2B3-201ENST00000341259 LETM1O95202 739 aaPredicted RBP23.07■■□□□ 1.28
SH2B3-201ENST00000341259 XBP1P17861 261 aa23.07■■□□□ 1.28
SH2B3-201ENST00000341259 PCMTD1Q96MG8 357 aaPredicted RBP23.07■■□□□ 1.28
SH2B3-201ENST00000341259 GOLGA6L1Q8N7Z2 621 aa23.07■■□□□ 1.28
SH2B3-201ENST00000341259 ASXL1Q8IXJ9 1541 aa23.07■■□□□ 1.28
SH2B3-201ENST00000341259 NUTM1Q86Y26 1132 aa23.06■■□□□ 1.28
SH2B3-201ENST00000341259 CTDP1Q9Y5B0 961 aaPredicted RBP23.06■■□□□ 1.28
SH2B3-201ENST00000341259 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
SH2B3-201ENST00000341259 ANKRD1Q15327 319 aa23.06■■□□□ 1.28
SH2B3-201ENST00000341259 ZNF518AQ6AHZ1 1483 aa23.05■■□□□ 1.28
SH2B3-201ENST00000341259 CWC27Q6UX04 472 aaKnown RBP23.05■■□□□ 1.28
SH2B3-201ENST00000341259 CCAR2Q8N163 923 aaKnown RBP23.05■■□□□ 1.28
SH2B3-201ENST00000341259 NUTM2BA6NNL0 878 aaPredicted RBP23.05■■□□□ 1.28
SH2B3-201ENST00000341259 NUTM2EB1AL46 878 aaPredicted RBP23.05■■□□□ 1.28
SH2B3-201ENST00000341259 TRIM27P14373 513 aa23.05■■□□□ 1.28
SH2B3-201ENST00000341259 NUTM2AQ8IVF1 878 aaPredicted RBP23.05■■□□□ 1.28
SH2B3-201ENST00000341259 FIBPO43427 364 aa23.05■■□□□ 1.28
SH2B3-201ENST00000341259 AMOTQ4VCS5 1084 aa23.05■■□□□ 1.28
SH2B3-201ENST00000341259 SDF4Q9BRK5 362 aa23.04■■□□□ 1.28
SH2B3-201ENST00000341259 SHANK2Q9UPX8 1470 aa23.04■■□□□ 1.28
SH2B3-201ENST00000341259 SMARCA5O60264 1052 aaPredicted RBP23.04■■□□□ 1.28
SH2B3-201ENST00000341259 TTC21BQ7Z4L5 1316 aa23.04■■□□□ 1.28
SH2B3-201ENST00000341259 STK3Q13188 491 aa23.03■■□□□ 1.28
SH2B3-201ENST00000341259 NAT10Q9H0A0 1025 aaKnown RBP23.03■■□□□ 1.28
SH2B3-201ENST00000341259 GNL3LQ9NVN8 582 aaKnown RBP23.03■■□□□ 1.28
SH2B3-201ENST00000341259 TCEAL9Q9UHQ7 104 aa23.03■■□□□ 1.28
SH2B3-201ENST00000341259 RRP12Q5JTH9 1297 aaKnown RBP23.03■■□□□ 1.28
SH2B3-201ENST00000341259 AEBP1Q8IUX7 1158 aa23.03■■□□□ 1.28
SH2B3-201ENST00000341259 TSPY26PQ9H489 355 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms