RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 FAM135BQ49AJ0 1406 aa25.82■■□□□ 1.72
CLPB-202ENST00000340729 SPATA31D1Q6ZQQ2 1576 aa25.82■■□□□ 1.72
CLPB-202ENST00000340729 CLEC17AQ6ZS10 378 aa25.81■■□□□ 1.72
CLPB-202ENST00000340729 ZBTB7BO15156 539 aaPredicted RBP25.81■■□□□ 1.72
CLPB-202ENST00000340729 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
CLPB-202ENST00000340729 ESPNB1AK53 854 aa25.79■■□□□ 1.72
CLPB-202ENST00000340729 SRPK2P78362 688 aaKnown RBP25.79■■□□□ 1.72
CLPB-202ENST00000340729 K7ELQ4 463 aaPredicted RBP25.79■■□□□ 1.72
CLPB-202ENST00000340729 MLECQ14165 292 aa25.79■■□□□ 1.72
CLPB-202ENST00000340729 IBTKQ9P2D0 1353 aaPredicted RBP25.78■■□□□ 1.72
CLPB-202ENST00000340729 NAP1L5Q96NT1 182 aaPredicted RBP25.77■■□□□ 1.72
CLPB-202ENST00000340729 CALD1Q05682 793 aaKnown RBP25.76■■□□□ 1.71
CLPB-202ENST00000340729 MRPL50Q8N5N7 158 aaKnown RBP25.75■■□□□ 1.71
CLPB-202ENST00000340729 CFAP44Q96MT7 982 aa25.75■■□□□ 1.71
CLPB-202ENST00000340729 PPP6R1Q9UPN7 881 aa25.75■■□□□ 1.71
CLPB-202ENST00000340729 ANKRD45Q5TZF3 282 aa25.75■■□□□ 1.71
CLPB-202ENST00000340729 TBC1D9Q6ZT07 1266 aa25.75■■□□□ 1.71
CLPB-202ENST00000340729 GAS2L3Q86XJ1 694 aa25.74■■□□□ 1.71
CLPB-202ENST00000340729 ABCC4O15439 1325 aa25.74■■□□□ 1.71
CLPB-202ENST00000340729 VAMP4O75379 141 aa25.73■■□□□ 1.71
CLPB-202ENST00000340729 HDGFL2Q7Z4V5 671 aaPredicted RBP25.73■■□□□ 1.71
CLPB-202ENST00000340729 KIF24Q5T7B8 1368 aa25.72■■□□□ 1.71
CLPB-202ENST00000340729 TRIM44Q96DX7 344 aaPredicted RBP25.72■■□□□ 1.71
CLPB-202ENST00000340729 YTHDC2Q9H6S0 1430 aaKnown RBP25.71■■□□□ 1.71
CLPB-202ENST00000340729 ALKQ9UM73 1620 aa25.71■■□□□ 1.71
CLPB-202ENST00000340729 CD2BP2O95400 341 aaKnown RBP25.71■■□□□ 1.71
CLPB-202ENST00000340729 SAFB2Q14151 953 aaKnown RBP eCLIP25.71■■□□□ 1.71
CLPB-202ENST00000340729 A2ML1A8K2U0 1454 aa25.71■■□□□ 1.71
CLPB-202ENST00000340729 CDC45O75419 566 aa25.7■■□□□ 1.71
CLPB-202ENST00000340729 HSP90AA1P07900 732 aaKnown RBP25.7■■□□□ 1.71
CLPB-202ENST00000340729 NFE2L2Q16236 605 aa25.7■■□□□ 1.71
CLPB-202ENST00000340729 ERBB4Q15303 1308 aa25.7■■□□□ 1.71
CLPB-202ENST00000340729 GOLGA6L22H0YM25 854 aa25.7■■□□□ 1.7
CLPB-202ENST00000340729 SETD1AO15047 1707 aaKnown RBP25.7■■□□□ 1.7
CLPB-202ENST00000340729 IFT57Q9NWB7 429 aa25.7■■□□□ 1.7
CLPB-202ENST00000340729 PRKAR2BP31323 418 aa25.69■■□□□ 1.7
CLPB-202ENST00000340729 RRP9O43818 475 aaKnown RBP25.68■■□□□ 1.7
CLPB-202ENST00000340729 GNAI1P63096 354 aa25.68■■□□□ 1.7
CLPB-202ENST00000340729 ZNF853P0CG23 659 aa25.68■■□□□ 1.7
CLPB-202ENST00000340729 SIRT2Q8IXJ6 389 aa25.68■■□□□ 1.7
CLPB-202ENST00000340729 PPP1R9BQ96SB3 815 aa25.68■■□□□ 1.7
CLPB-202ENST00000340729 CCDC173Q0VFZ6 552 aa25.67■■□□□ 1.7
CLPB-202ENST00000340729 KLHL40Q2TBA0 621 aa25.67■■□□□ 1.7
CLPB-202ENST00000340729 ATP7BP35670 1465 aa25.66■■□□□ 1.7
CLPB-202ENST00000340729 PRAM1Q96QH2 718 aa25.66■■□□□ 1.7
CLPB-202ENST00000340729 STK26Q9P289 416 aa25.66■■□□□ 1.7
CLPB-202ENST00000340729 STAG3Q9UJ98 1225 aa25.66■■□□□ 1.7
CLPB-202ENST00000340729 MINK1Q8N4C8 1332 aaPredicted RBP25.66■■□□□ 1.7
CLPB-202ENST00000340729 GLIPR1L2Q4G1C9 344 aa25.65■■□□□ 1.7
CLPB-202ENST00000340729 GAS2L2Q8NHY3 880 aa25.65■■□□□ 1.7
CLPB-202ENST00000340729 RABEP1Q15276 862 aa25.64■■□□□ 1.7
CLPB-202ENST00000340729 API5Q9BZZ5 524 aaKnown RBP25.64■■□□□ 1.69
CLPB-202ENST00000340729 POLKQ9UBT6 870 aa25.64■■□□□ 1.69
CLPB-202ENST00000340729 SSFA2P28290 1259 aa25.63■■□□□ 1.69
CLPB-202ENST00000340729 BAG4O95429 457 aaKnown RBP25.62■■□□□ 1.69
CLPB-202ENST00000340729 C1orf115Q9H7X2 142 aa25.62■■□□□ 1.69
CLPB-202ENST00000340729 NRXN3Q9Y4C0 1643 aa25.61■■□□□ 1.69
CLPB-202ENST00000340729 RIMS2Q9UQ26 1411 aa25.61■■□□□ 1.69
CLPB-202ENST00000340729 DLC1Q96QB1 1528 aa25.61■■□□□ 1.69
CLPB-202ENST00000340729 RBM42Q9BTD8 480 aaKnown RBP25.6■■□□□ 1.69
CLPB-202ENST00000340729 CDK19Q9BWU1 502 aa25.6■■□□□ 1.69
CLPB-202ENST00000340729 MAP2P11137 1827 aaKnown RBP25.6■■□□□ 1.69
CLPB-202ENST00000340729 CDK12Q9NYV4 1490 aaPredicted RBP25.6■■□□□ 1.69
CLPB-202ENST00000340729 NUCB2P80303 420 aa25.6■■□□□ 1.69
CLPB-202ENST00000340729 TSPYL6Q8N831 410 aa25.6■■□□□ 1.69
CLPB-202ENST00000340729 KNDC1Q76NI1 1749 aa25.6■■□□□ 1.69
CLPB-202ENST00000340729 TPM2P07951 284 aa25.59■■□□□ 1.69
CLPB-202ENST00000340729 GSPT1P15170 499 aaKnown RBP25.59■■□□□ 1.69
CLPB-202ENST00000340729 LMOD3Q0VAK6 560 aa25.59■■□□□ 1.69
CLPB-202ENST00000340729 PLEKHM2Q8IWE5 1019 aa25.59■■□□□ 1.69
CLPB-202ENST00000340729 PHACTR3Q96KR7 559 aa25.59■■□□□ 1.69
CLPB-202ENST00000340729 MBIPQ9NS73 344 aa25.59■■□□□ 1.69
CLPB-202ENST00000340729 NASPP49321 788 aaPredicted RBP25.59■■□□□ 1.69
CLPB-202ENST00000340729 ZNF445P59923 1031 aa25.59■■□□□ 1.69
CLPB-202ENST00000340729 HSP90AA2PQ14568 343 aaPredicted RBP25.59■■□□□ 1.69
CLPB-202ENST00000340729 DCTPP1Q9H773 170 aa25.59■■□□□ 1.69
CLPB-202ENST00000340729 CABP1Q9NZU7 370 aa25.59■■□□□ 1.69
CLPB-202ENST00000340729 CYP2E1P05181 493 aaPredicted RBP25.58■■□□□ 1.69
CLPB-202ENST00000340729 TWISTNBQ3B726 338 aaPredicted RBP25.57■■□□□ 1.68
CLPB-202ENST00000340729 DDX49Q9Y6V7 483 aaKnown RBP25.57■■□□□ 1.68
CLPB-202ENST00000340729 TTC22Q5TAA0 569 aa25.56■■□□□ 1.68
CLPB-202ENST00000340729 FOXD4L1Q9NU39 408 aa25.56■■□□□ 1.68
CLPB-202ENST00000340729 ANP32BQ92688 251 aaKnown RBP25.56■■□□□ 1.68
CLPB-202ENST00000340729 AATKQ6ZMQ8 1374 aa25.55■■□□□ 1.68
CLPB-202ENST00000340729 DLG5Q8TDM6 1919 aa25.55■■□□□ 1.68
CLPB-202ENST00000340729 CPSF1Q10570 1443 aaKnown RBP25.55■■□□□ 1.68
CLPB-202ENST00000340729 IL13P35225 146 aa25.55■■□□□ 1.68
CLPB-202ENST00000340729 ZSCAN30Q86W11 494 aa25.55■■□□□ 1.68
CLPB-202ENST00000340729 ESF1Q9H501 851 aaKnown RBP25.54■■□□□ 1.68
CLPB-202ENST00000340729 CWC22Q9HCG8 908 aaKnown RBP25.54■■□□□ 1.68
CLPB-202ENST00000340729 UBR1Q8IWV7 1749 aa25.54■■□□□ 1.68
CLPB-202ENST00000340729 HS1BP3Q53T59 392 aa25.54■■□□□ 1.68
CLPB-202ENST00000340729 USP26Q9BXU7 913 aa25.54■■□□□ 1.68
CLPB-202ENST00000340729 THUMPD2Q9BTF0 503 aaKnown RBP25.53■■□□□ 1.68
CLPB-202ENST00000340729 INTS3Q68E01 1043 aaKnown RBP25.52■■□□□ 1.68
CLPB-202ENST00000340729 EDC4Q6P2E9 1401 aaKnown RBP25.52■■□□□ 1.68
CLPB-202ENST00000340729 HMOX1P09601 288 aa25.51■■□□□ 1.67
CLPB-202ENST00000340729 ATP10DQ9P241 1426 aa25.5■■□□□ 1.67
CLPB-202ENST00000340729 TERF1P54274 439 aa25.49■■□□□ 1.67
CLPB-202ENST00000340729 ANKRD44Q8N8A2 993 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms