RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 AAMPQ13685 434 aa14.99□□□□□ -0.01
CCDC144CP-201ENST00000340196 CHD1LQ86WJ1 897 aa14.99□□□□□ -0.01
CCDC144CP-201ENST00000340196 PHACTR3Q96KR7 559 aa14.99□□□□□ -0.01
CCDC144CP-201ENST00000340196 KIF2CQ99661 725 aa14.99□□□□□ -0.01
CCDC144CP-201ENST00000340196 SETD1AO15047 1707 aaKnown RBP14.99□□□□□ -0.01
CCDC144CP-201ENST00000340196 PRKAR2BP31323 418 aa14.99□□□□□ -0.01
CCDC144CP-201ENST00000340196 PRAM1Q96QH2 718 aa14.99□□□□□ -0.01
CCDC144CP-201ENST00000340196 PUS7Q96PZ0 661 aaKnown RBP14.98□□□□□ -0.01
CCDC144CP-201ENST00000340196 GRPEL1Q9HAV7 217 aa14.98□□□□□ -0.01
CCDC144CP-201ENST00000340196 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC144CP-201ENST00000340196 DIAPH1O60610 1272 aaKnown RBP14.97□□□□□ -0.01
CCDC144CP-201ENST00000340196 HSP90AA1P07900 732 aaKnown RBP14.97□□□□□ -0.01
CCDC144CP-201ENST00000340196 DDIT3P35638 169 aa14.96□□□□□ -0.01
CCDC144CP-201ENST00000340196 SIRT2Q8IXJ6 389 aa14.96□□□□□ -0.01
CCDC144CP-201ENST00000340196 PNNQ9H307 717 aaKnown RBP14.96□□□□□ -0.01
CCDC144CP-201ENST00000340196 NRXN3Q9Y4C0 1643 aa14.96□□□□□ -0.01
CCDC144CP-201ENST00000340196 COL3A1P02461 1466 aaPredicted RBP14.96□□□□□ -0.01
CCDC144CP-201ENST00000340196 YTHDC2Q9H6S0 1430 aaKnown RBP14.96□□□□□ -0.01
CCDC144CP-201ENST00000340196 ABCC11Q96J66 1382 aa14.96□□□□□ -0.02
CCDC144CP-201ENST00000340196 SSFA2P28290 1259 aa14.96□□□□□ -0.02
CCDC144CP-201ENST00000340196 CABP1Q9NZU7 370 aa14.96□□□□□ -0.02
CCDC144CP-201ENST00000340196 PTPRMP28827 1452 aa14.95□□□□□ -0.02
CCDC144CP-201ENST00000340196 PPIP5K1Q6PFW1 1433 aa14.95□□□□□ -0.02
CCDC144CP-201ENST00000340196 HSP90AA2PQ14568 343 aaPredicted RBP14.95□□□□□ -0.02
CCDC144CP-201ENST00000340196 TBC1D9Q6ZT07 1266 aa14.95□□□□□ -0.02
CCDC144CP-201ENST00000340196 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
CCDC144CP-201ENST00000340196 GAS2L2Q8NHY3 880 aa14.95□□□□□ -0.02
CCDC144CP-201ENST00000340196 TMEM2Q9UHN6 1383 aa14.94□□□□□ -0.02
CCDC144CP-201ENST00000340196 FAM83GA6ND36 823 aa14.94□□□□□ -0.02
CCDC144CP-201ENST00000340196 APBB1O00213 710 aa14.94□□□□□ -0.02
CCDC144CP-201ENST00000340196 RBM25P49756 843 aaKnown RBP14.94□□□□□ -0.02
CCDC144CP-201ENST00000340196 DCTN1Q14203 1278 aa14.94□□□□□ -0.02
CCDC144CP-201ENST00000340196 CHAMP1Q96JM3 812 aa14.94□□□□□ -0.02
CCDC144CP-201ENST00000340196 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
CCDC144CP-201ENST00000340196 EMILIN1Q9Y6C2 1016 aa14.93□□□□□ -0.02
CCDC144CP-201ENST00000340196 DLC1Q96QB1 1528 aa14.93□□□□□ -0.02
CCDC144CP-201ENST00000340196 KIF16BQ96L93 1317 aa14.93□□□□□ -0.02
CCDC144CP-201ENST00000340196 ZBTB7BO15156 539 aaPredicted RBP14.93□□□□□ -0.02
CCDC144CP-201ENST00000340196 MRE11P49959 708 aa14.93□□□□□ -0.02
CCDC144CP-201ENST00000340196 C16orf71Q8IYS4 520 aaPredicted RBP14.93□□□□□ -0.02
CCDC144CP-201ENST00000340196 NCOA3Q9Y6Q9 1424 aa14.92□□□□□ -0.02
CCDC144CP-201ENST00000340196 USP32Q8NFA0 1604 aa14.92□□□□□ -0.02
CCDC144CP-201ENST00000340196 DDX11L8A8MPP1 907 aa14.92□□□□□ -0.02
CCDC144CP-201ENST00000340196 CT47B1P0C2W7 299 aaPredicted RBP14.92□□□□□ -0.02
CCDC144CP-201ENST00000340196 KRT24Q2M2I5 525 aa14.92□□□□□ -0.02
CCDC144CP-201ENST00000340196 OTUD7AQ8TE49 926 aaPredicted RBP14.92□□□□□ -0.02
CCDC144CP-201ENST00000340196 CLCN1P35523 988 aa14.91□□□□□ -0.02
CCDC144CP-201ENST00000340196 CEBPAP49715 358 aaPredicted RBP14.91□□□□□ -0.02
CCDC144CP-201ENST00000340196 PKP1Q13835 747 aa14.91□□□□□ -0.02
CCDC144CP-201ENST00000340196 NSD2O96028 1365 aa14.91□□□□□ -0.02
CCDC144CP-201ENST00000340196 CD163L1Q9NR16 1453 aa14.91□□□□□ -0.02
CCDC144CP-201ENST00000340196 IPO8O15397 1037 aaKnown RBP14.91□□□□□ -0.02
CCDC144CP-201ENST00000340196 WAPLQ7Z5K2 1190 aa14.91□□□□□ -0.02
CCDC144CP-201ENST00000340196 NCKAP5LQ9HCH0 1330 aa14.91□□□□□ -0.02
CCDC144CP-201ENST00000340196 LRRC7Q96NW7 1537 aa14.9□□□□□ -0.02
CCDC144CP-201ENST00000340196 VAMP4O75379 141 aa14.9□□□□□ -0.02
CCDC144CP-201ENST00000340196 GSPT1P15170 499 aaKnown RBP14.9□□□□□ -0.02
CCDC144CP-201ENST00000340196 RAB3GAP1Q15042 981 aa14.9□□□□□ -0.02
CCDC144CP-201ENST00000340196 CDK19Q9BWU1 502 aa14.9□□□□□ -0.02
CCDC144CP-201ENST00000340196 A0A0U1RQG5 324 aaPredicted RBP14.9□□□□□ -0.02
CCDC144CP-201ENST00000340196 BMP2KLQ5H9B9 411 aa14.9□□□□□ -0.02
CCDC144CP-201ENST00000340196 MRPL50Q8N5N7 158 aaKnown RBP14.89□□□□□ -0.03
CCDC144CP-201ENST00000340196 C8orf58Q8NAV2 365 aa14.89□□□□□ -0.03
CCDC144CP-201ENST00000340196 MBIPQ9NS73 344 aa14.89□□□□□ -0.03
CCDC144CP-201ENST00000340196 POLKQ9UBT6 870 aa14.89□□□□□ -0.03
CCDC144CP-201ENST00000340196 SLIT1O75093 1534 aa14.89□□□□□ -0.03
CCDC144CP-201ENST00000340196 ARHGAP23Q9P227 1491 aa14.89□□□□□ -0.03
CCDC144CP-201ENST00000340196 AK9Q5TCS8 1911 aa14.89□□□□□ -0.03
CCDC144CP-201ENST00000340196 ESPNB1AK53 854 aa14.89□□□□□ -0.03
CCDC144CP-201ENST00000340196 TERF2IPQ9NYB0 399 aa14.89□□□□□ -0.03
CCDC144CP-201ENST00000340196 SNX21Q969T3 373 aa14.88□□□□□ -0.03
CCDC144CP-201ENST00000340196 ADAMTSL3P82987 1691 aa14.88□□□□□ -0.03
CCDC144CP-201ENST00000340196 KNDC1Q76NI1 1749 aa14.88□□□□□ -0.03
CCDC144CP-201ENST00000340196 K7ELQ4 463 aaPredicted RBP14.88□□□□□ -0.03
CCDC144CP-201ENST00000340196 RRP9O43818 475 aaKnown RBP14.88□□□□□ -0.03
CCDC144CP-201ENST00000340196 RRS1Q15050 365 aaKnown RBP14.88□□□□□ -0.03
CCDC144CP-201ENST00000340196 SMARCA5O60264 1052 aaPredicted RBP14.87□□□□□ -0.03
CCDC144CP-201ENST00000340196 SIRT1Q96EB6 747 aa14.87□□□□□ -0.03
CCDC144CP-201ENST00000340196 IL16Q14005 1332 aa14.87□□□□□ -0.03
CCDC144CP-201ENST00000340196 TECPR2O15040 1411 aa14.86□□□□□ -0.03
CCDC144CP-201ENST00000340196 PLEKHG1Q9ULL1 1385 aa14.86□□□□□ -0.03
CCDC144CP-201ENST00000340196 NCLP19338 710 aaKnown RBP14.86□□□□□ -0.03
CCDC144CP-201ENST00000340196 FOXD4L5Q5VV16 416 aaPredicted RBP14.86□□□□□ -0.03
CCDC144CP-201ENST00000340196 NME9Q86XW9 330 aa14.86□□□□□ -0.03
CCDC144CP-201ENST00000340196 FOXD4L4Q8WXT5 416 aaPredicted RBP14.86□□□□□ -0.03
CCDC144CP-201ENST00000340196 ALDH1L2Q3SY69 923 aa14.85□□□□□ -0.03
CCDC144CP-201ENST00000340196 GBP4Q96PP9 640 aa14.85□□□□□ -0.03
CCDC144CP-201ENST00000340196 METP08581 1390 aa14.85□□□□□ -0.03
CCDC144CP-201ENST00000340196 ADAMTS13Q76LX8 1427 aa14.85□□□□□ -0.03
CCDC144CP-201ENST00000340196 MED14O60244 1454 aa14.85□□□□□ -0.03
CCDC144CP-201ENST00000340196 TWISTNBQ3B726 338 aaPredicted RBP14.85□□□□□ -0.03
CCDC144CP-201ENST00000340196 HDGFL2Q7Z4V5 671 aaPredicted RBP14.85□□□□□ -0.03
CCDC144CP-201ENST00000340196 TRIM44Q96DX7 344 aaPredicted RBP14.85□□□□□ -0.03
CCDC144CP-201ENST00000340196 RIMS1Q86UR5 1692 aaKnown RBP14.84□□□□□ -0.03
CCDC144CP-201ENST00000340196 FCHSD2O94868 740 aa14.84□□□□□ -0.03
CCDC144CP-201ENST00000340196 LTKP29376 864 aa14.84□□□□□ -0.03
CCDC144CP-201ENST00000340196 DDX49Q9Y6V7 483 aaKnown RBP14.84□□□□□ -0.03
CCDC144CP-201ENST00000340196 FAM135BQ49AJ0 1406 aa14.84□□□□□ -0.03
CCDC144CP-201ENST00000340196 RBM10P98175 930 aaKnown RBP14.84□□□□□ -0.03
CCDC144CP-201ENST00000340196 NFE2L2Q16236 605 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms