RNA–Protein interactions for RNA: ENST00000340170.8

HIRA-202, Transcript of histone cell cycle regulator, humanhuman

TSL 1 (best) BASIC

Gene HIRA, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRA-202ENST00000340170 TBC1D9Q6ZT07 1266 aa27.77■■■□□ 2.04
HIRA-202ENST00000340170 KIAA1211Q6ZU35 1233 aa27.77■■■□□ 2.04
HIRA-202ENST00000340170 NOL8Q76FK4 1167 aaKnown RBP27.77■■■□□ 2.04
HIRA-202ENST00000340170 ZBTB7BO15156 539 aaPredicted RBP27.76■■■□□ 2.03
HIRA-202ENST00000340170 NASPP49321 788 aaPredicted RBP27.76■■■□□ 2.03
HIRA-202ENST00000340170 GAS2L2Q8NHY3 880 aa27.76■■■□□ 2.03
HIRA-202ENST00000340170 YTHDC2Q9H6S0 1430 aaKnown RBP27.76■■■□□ 2.03
HIRA-202ENST00000340170 MIS18AQ9NYP9 233 aa27.76■■■□□ 2.03
HIRA-202ENST00000340170 CAVIN1Q6NZI2 390 aaKnown RBP27.76■■■□□ 2.03
HIRA-202ENST00000340170 MRPL50Q8N5N7 158 aaKnown RBP27.75■■■□□ 2.03
HIRA-202ENST00000340170 GNAI1P63096 354 aa27.74■■■□□ 2.03
HIRA-202ENST00000340170 FAM13BQ9NYF5 915 aa27.74■■■□□ 2.03
HIRA-202ENST00000340170 AEBP1Q8IUX7 1158 aa27.74■■■□□ 2.03
HIRA-202ENST00000340170 FRMPD1Q5SYB0 1578 aa27.74■■■□□ 2.03
HIRA-202ENST00000340170 IFT172Q9UG01 1749 aa27.74■■■□□ 2.03
HIRA-202ENST00000340170 SMARCA5O60264 1052 aaPredicted RBP27.73■■■□□ 2.03
HIRA-202ENST00000340170 COG3Q96JB2 828 aa27.73■■■□□ 2.03
HIRA-202ENST00000340170 ZNF692Q9BU19 519 aaPredicted RBP27.73■■■□□ 2.03
HIRA-202ENST00000340170 PPLO60437 1756 aa27.73■■■□□ 2.03
HIRA-202ENST00000340170 IL16Q14005 1332 aa27.73■■■□□ 2.03
HIRA-202ENST00000340170 CAMSAP1Q5T5Y3 1602 aa27.73■■■□□ 2.03
HIRA-202ENST00000340170 GOLGA6L22H0YM25 854 aa27.73■■■□□ 2.03
HIRA-202ENST00000340170 ALDH1L2Q3SY69 923 aa27.73■■■□□ 2.03
HIRA-202ENST00000340170 SLC4A10Q6U841 1118 aa27.73■■■□□ 2.03
HIRA-202ENST00000340170 MYO3AQ8NEV4 1616 aa27.73■■■□□ 2.03
HIRA-202ENST00000340170 MCM10Q7L590 875 aa27.73■■■□□ 2.03
HIRA-202ENST00000340170 MSNP26038 577 aaKnown RBP27.72■■■□□ 2.03
HIRA-202ENST00000340170 SIRT2Q8IXJ6 389 aa27.72■■■□□ 2.03
HIRA-202ENST00000340170 PUS7Q96PZ0 661 aaKnown RBP27.72■■■□□ 2.03
HIRA-202ENST00000340170 R3HCC1Q9Y3T6 440 aaKnown RBP27.71■■■□□ 2.03
HIRA-202ENST00000340170 LMTK2Q8IWU2 1503 aa27.71■■■□□ 2.03
HIRA-202ENST00000340170 OTUD7AQ8TE49 926 aaPredicted RBP27.7■■■□□ 2.03
HIRA-202ENST00000340170 SULT6B1Q6IMI4 303 aa27.7■■■□□ 2.02
HIRA-202ENST00000340170 PKP1Q13835 747 aa27.69■■■□□ 2.02
HIRA-202ENST00000340170 PLEKHG5O94827 1062 aa27.69■■■□□ 2.02
HIRA-202ENST00000340170 NECTIN2Q92692 538 aa27.69■■■□□ 2.02
HIRA-202ENST00000340170 ESF1Q9H501 851 aaKnown RBP27.69■■■□□ 2.02
HIRA-202ENST00000340170 MLH3Q9UHC1 1453 aa27.69■■■□□ 2.02
HIRA-202ENST00000340170 RNF214Q8ND24 703 aa27.68■■■□□ 2.02
HIRA-202ENST00000340170 RBM27Q9P2N5 1060 aaKnown RBP27.68■■■□□ 2.02
HIRA-202ENST00000340170 PPIP5K1Q6PFW1 1433 aa27.68■■■□□ 2.02
HIRA-202ENST00000340170 BMP2KLQ5H9B9 411 aa27.68■■■□□ 2.02
HIRA-202ENST00000340170 K7ELQ4 463 aaPredicted RBP27.66■■■□□ 2.02
HIRA-202ENST00000340170 NEXMIFQ5QGS0 1516 aa27.66■■■□□ 2.02
HIRA-202ENST00000340170 CALD1Q05682 793 aaKnown RBP27.66■■■□□ 2.02
HIRA-202ENST00000340170 FAM69CQ0P6D2 419 aa27.66■■■□□ 2.02
HIRA-202ENST00000340170 GCC1Q96CN9 775 aa27.66■■■□□ 2.02
HIRA-202ENST00000340170 RRP9O43818 475 aaKnown RBP27.65■■■□□ 2.02
HIRA-202ENST00000340170 HECW2Q9P2P5 1572 aa27.65■■■□□ 2.02
HIRA-202ENST00000340170 XPCQ01831 940 aaPredicted RBP27.65■■■□□ 2.02
HIRA-202ENST00000340170 NUDT16Q96DE0 195 aaKnown RBP27.65■■■□□ 2.02
HIRA-202ENST00000340170 RAB3GAP1Q15042 981 aa27.63■■■□□ 2.01
HIRA-202ENST00000340170 NEURL4Q96JN8 1562 aa27.63■■■□□ 2.01
HIRA-202ENST00000340170 PRPF40AO75400 957 aaKnown RBP27.63■■■□□ 2.01
HIRA-202ENST00000340170 IL13P35225 146 aa27.63■■■□□ 2.01
HIRA-202ENST00000340170 ZC3H13Q5T200 1668 aaKnown RBP27.62■■■□□ 2.01
HIRA-202ENST00000340170 RBM25P49756 843 aaKnown RBP27.62■■■□□ 2.01
HIRA-202ENST00000340170 ARHGEF28Q8N1W1 1705 aaKnown RBP27.62■■■□□ 2.01
HIRA-202ENST00000340170 IFT57Q9NWB7 429 aa27.62■■■□□ 2.01
HIRA-202ENST00000340170 SIGLEC1Q9BZZ2 1709 aa27.62■■■□□ 2.01
HIRA-202ENST00000340170 TSHZ3Q63HK5 1081 aa27.62■■■□□ 2.01
HIRA-202ENST00000340170 VIRMAQ69YN4 1812 aaKnown RBP27.61■■■□□ 2.01
HIRA-202ENST00000340170 CDC45O75419 566 aa27.61■■■□□ 2.01
HIRA-202ENST00000340170 API5Q9BZZ5 524 aaKnown RBP27.61■■■□□ 2.01
HIRA-202ENST00000340170 WASLO00401 505 aaPredicted RBP27.6■■■□□ 2.01
HIRA-202ENST00000340170 CD163L1Q9NR16 1453 aa27.6■■■□□ 2.01
HIRA-202ENST00000340170 BAG4O95429 457 aaKnown RBP27.6■■■□□ 2.01
HIRA-202ENST00000340170 GSPT1P15170 499 aaKnown RBP27.6■■■□□ 2.01
HIRA-202ENST00000340170 CFAP44Q96MT7 982 aa27.6■■■□□ 2.01
HIRA-202ENST00000340170 COL3A1P02461 1466 aaPredicted RBP27.59■■■□□ 2.01
HIRA-202ENST00000340170 F6X3S4 739 aa27.59■■■□□ 2.01
HIRA-202ENST00000340170 KIF2CQ99661 725 aa27.59■■■□□ 2.01
HIRA-202ENST00000340170 CHMP4BQ9H444 224 aaKnown RBP27.59■■■□□ 2.01
HIRA-202ENST00000340170 PTPRMP28827 1452 aa27.59■■■□□ 2.01
HIRA-202ENST00000340170 LRRC7Q96NW7 1537 aa27.59■■■□□ 2.01
HIRA-202ENST00000340170 ZGPATQ8N5A5 531 aaKnown RBP27.57■■■□□ 2
HIRA-202ENST00000340170 SKOR2Q2VWA4 1001 aaPredicted RBP27.56■■■□□ 2
HIRA-202ENST00000340170 MEIS3Q99687 375 aa27.56■■■□□ 2
HIRA-202ENST00000340170 ADGRB2O60241 1585 aa27.56■■■□□ 2
HIRA-202ENST00000340170 SLC4A2P04920 1241 aa27.56■■■□□ 2
HIRA-202ENST00000340170 LMOD3Q0VAK6 560 aa27.55■■■□□ 2
HIRA-202ENST00000340170 NCBP3Q53F19 620 aaKnown RBP27.55■■■□□ 2
HIRA-202ENST00000340170 HSP90AB2PQ58FF8 381 aa27.55■■■□□ 2
HIRA-202ENST00000340170 FOXO3O43524 673 aa27.55■■■□□ 2
HIRA-202ENST00000340170 PLEKHM2Q8IWE5 1019 aa27.55■■■□□ 2
HIRA-202ENST00000340170 AK9Q5TCS8 1911 aa27.54■■■□□ 2
HIRA-202ENST00000340170 ZMYM3Q14202 1370 aa27.54■■■□□ 2
HIRA-202ENST00000340170 PIK3C2BO00750 1634 aa27.54■■■□□ 2
HIRA-202ENST00000340170 CCDC61Q9Y6R9 512 aa27.53■■■□□ 2
HIRA-202ENST00000340170 PNPLA6Q8IY17 1366 aa27.53■■■□□ 2
HIRA-202ENST00000340170 DTNBO60941 627 aa27.53■■■□□ 2
HIRA-202ENST00000340170 NUTM2GQ5VZR2 741 aa27.52■■■□□ 2
HIRA-202ENST00000340170 SNX21Q969T3 373 aa27.52■■■□□ 2
HIRA-202ENST00000340170 FAM135BQ49AJ0 1406 aa27.52■■■□□ 2
HIRA-202ENST00000340170 PTMAP06454 111 aaKnown RBP27.52■■■□□ 2
HIRA-202ENST00000340170 ZSCAN30Q86W11 494 aa27.52■■■□□ 2
HIRA-202ENST00000340170 PRIM1P49642 420 aaKnown RBP27.51■■■□□ 2
HIRA-202ENST00000340170 PLCB2Q00722 1185 aa27.51■■□□□ 1.99
HIRA-202ENST00000340170 CCDC173Q0VFZ6 552 aa27.51■■□□□ 1.99
HIRA-202ENST00000340170 RBSNQ9H1K0 784 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms