RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 XPCQ01831 940 aaPredicted RBP19.95■□□□□ 0.78
MBD1-203ENST00000339998 NRKQ7Z2Y5 1582 aa19.95■□□□□ 0.78
MBD1-203ENST00000339998 ADAMTSL3P82987 1691 aa19.95■□□□□ 0.78
MBD1-203ENST00000339998 SSH2Q76I76 1423 aa19.95■□□□□ 0.78
MBD1-203ENST00000339998 PNNQ9H307 717 aaKnown RBP19.94■□□□□ 0.78
MBD1-203ENST00000339998 TSPYL6Q8N831 410 aa19.93■□□□□ 0.78
MBD1-203ENST00000339998 RGS3P49796 1198 aa19.92■□□□□ 0.78
MBD1-203ENST00000339998 PDE3AQ14432 1141 aa19.92■□□□□ 0.78
MBD1-203ENST00000339998 PEAK1Q9H792 1746 aa19.92■□□□□ 0.78
MBD1-203ENST00000339998 ABTB2Q8N961 1025 aa19.92■□□□□ 0.78
MBD1-203ENST00000339998 SETD1BQ9UPS6 1966 aaKnown RBP19.92■□□□□ 0.78
MBD1-203ENST00000339998 ESCO1Q5FWF5 840 aa19.91■□□□□ 0.78
MBD1-203ENST00000339998 LTV1Q96GA3 475 aaPredicted RBP19.91■□□□□ 0.78
MBD1-203ENST00000339998 FOXO3O43524 673 aa19.9■□□□□ 0.78
MBD1-203ENST00000339998 AMPHP49418 695 aa19.9■□□□□ 0.78
MBD1-203ENST00000339998 ZBTB7CA1YPR0 619 aa19.89■□□□□ 0.78
MBD1-203ENST00000339998 MCM10Q7L590 875 aa19.89■□□□□ 0.78
MBD1-203ENST00000339998 NPM2Q86SE8 214 aaKnown RBP19.89■□□□□ 0.78
MBD1-203ENST00000339998 NOB1Q9ULX3 412 aaKnown RBP19.89■□□□□ 0.78
MBD1-203ENST00000339998 PCDHB15Q9Y5E8 787 aa19.89■□□□□ 0.78
MBD1-203ENST00000339998 ORAI2Q96SN7 254 aa19.89■□□□□ 0.77
MBD1-203ENST00000339998 TRIM27P14373 513 aa19.89■□□□□ 0.77
MBD1-203ENST00000339998 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
MBD1-203ENST00000339998 CENPQQ7L2Z9 268 aaPredicted RBP19.89■□□□□ 0.77
MBD1-203ENST00000339998 PHF8Q9UPP1 1060 aa19.89■□□□□ 0.77
MBD1-203ENST00000339998 PDE4AP27815 886 aa19.88■□□□□ 0.77
MBD1-203ENST00000339998 KRT24Q2M2I5 525 aa19.88■□□□□ 0.77
MBD1-203ENST00000339998 MBIPQ9NS73 344 aa19.88■□□□□ 0.77
MBD1-203ENST00000339998 USP31Q70CQ4 1352 aa19.87■□□□□ 0.77
MBD1-203ENST00000339998 TTC21AQ8NDW8 1320 aa19.87■□□□□ 0.77
MBD1-203ENST00000339998 CHD2O14647 1828 aaKnown RBP19.87■□□□□ 0.77
MBD1-203ENST00000339998 NALCNQ8IZF0 1738 aa19.87■□□□□ 0.77
MBD1-203ENST00000339998 DLG5Q8TDM6 1919 aa19.87■□□□□ 0.77
MBD1-203ENST00000339998 ZKSCAN2Q63HK3 967 aa19.86■□□□□ 0.77
MBD1-203ENST00000339998 FTSJ3Q8IY81 847 aaKnown RBP19.86■□□□□ 0.77
MBD1-203ENST00000339998 IL16Q14005 1332 aa19.86■□□□□ 0.77
MBD1-203ENST00000339998 PIK3R4Q99570 1358 aa19.86■□□□□ 0.77
MBD1-203ENST00000339998 PIK3C2AO00443 1686 aa19.86■□□□□ 0.77
MBD1-203ENST00000339998 MIS18AQ9NYP9 233 aa19.86■□□□□ 0.77
MBD1-203ENST00000339998 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
MBD1-203ENST00000339998 HSPA2P54652 639 aa19.85■□□□□ 0.77
MBD1-203ENST00000339998 C8orf58Q8NAV2 365 aa19.85■□□□□ 0.77
MBD1-203ENST00000339998 EYA1Q99502 592 aa19.85■□□□□ 0.77
MBD1-203ENST00000339998 DZIP1LQ8IYY4 767 aaKnown RBP19.84■□□□□ 0.77
MBD1-203ENST00000339998 LMOD2Q6P5Q4 547 aa19.84■□□□□ 0.77
MBD1-203ENST00000339998 USHBP1Q8N6Y0 703 aa19.84■□□□□ 0.77
MBD1-203ENST00000339998 FMN2Q9NZ56 1722 aa19.83■□□□□ 0.76
MBD1-203ENST00000339998 PSME1Q06323 249 aa19.83■□□□□ 0.76
MBD1-203ENST00000339998 ITPRIPQ8IWB1 547 aa19.83■□□□□ 0.76
MBD1-203ENST00000339998 ZNF142P52746 1687 aaPredicted RBP19.82■□□□□ 0.76
MBD1-203ENST00000339998 VAMP4O75379 141 aa19.82■□□□□ 0.76
MBD1-203ENST00000339998 MVPQ14764 893 aaKnown RBP19.81■□□□□ 0.76
MBD1-203ENST00000339998 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
MBD1-203ENST00000339998 TMEM57Q8N5G2 664 aa19.81■□□□□ 0.76
MBD1-203ENST00000339998 BACH2Q9BYV9 841 aa19.81■□□□□ 0.76
MBD1-203ENST00000339998 MTHFSDQ2M296 383 aaKnown RBP19.81■□□□□ 0.76
MBD1-203ENST00000339998 ATF7IPQ6VMQ6 1270 aa19.81■□□□□ 0.76
MBD1-203ENST00000339998 ZNF853P0CG23 659 aa19.8■□□□□ 0.76
MBD1-203ENST00000339998 ANKARQ7Z5J8 1434 aa19.8■□□□□ 0.76
MBD1-203ENST00000339998 DDX17Q92841 729 aaKnown RBP19.8■□□□□ 0.76
MBD1-203ENST00000339998 FLT4P35916 1363 aa19.8■□□□□ 0.76
MBD1-203ENST00000339998 HOXC9P31274 260 aa19.8■□□□□ 0.76
MBD1-203ENST00000339998 GNAI1P63096 354 aa19.8■□□□□ 0.76
MBD1-203ENST00000339998 IFT57Q9NWB7 429 aa19.79■□□□□ 0.76
MBD1-203ENST00000339998 CFAP44Q96MT7 982 aa19.79■□□□□ 0.76
MBD1-203ENST00000339998 SBNO1A3KN83 1393 aa19.79■□□□□ 0.76
MBD1-203ENST00000339998 TWISTNBQ3B726 338 aaPredicted RBP19.78■□□□□ 0.76
MBD1-203ENST00000339998 CT47B1P0C2W7 299 aaPredicted RBP19.77■□□□□ 0.76
MBD1-203ENST00000339998 ADGRL3Q9HAR2 1447 aa19.77■□□□□ 0.75
MBD1-203ENST00000339998 MS4A1P11836 297 aa19.74■□□□□ 0.75
MBD1-203ENST00000339998 MARF1Q9Y4F3 1742 aaKnown RBP19.74■□□□□ 0.75
MBD1-203ENST00000339998 LMOD3Q0VAK6 560 aa19.74■□□□□ 0.75
MBD1-203ENST00000339998 MRPL50Q8N5N7 158 aaKnown RBP19.74■□□□□ 0.75
MBD1-203ENST00000339998 CALD1Q05682 793 aaKnown RBP19.73■□□□□ 0.75
MBD1-203ENST00000339998 C1orf115Q9H7X2 142 aa19.73■□□□□ 0.75
MBD1-203ENST00000339998 IGSF1Q8N6C5 1336 aa19.73■□□□□ 0.75
MBD1-203ENST00000339998 LRRC59Q96AG4 307 aaKnown RBP19.72■□□□□ 0.75
MBD1-203ENST00000339998 RGPD1P0DJD0 1748 aa19.72■□□□□ 0.75
MBD1-203ENST00000339998 ALDH1L2Q3SY69 923 aa19.71■□□□□ 0.75
MBD1-203ENST00000339998 KIF16BQ96L93 1317 aa19.7■□□□□ 0.74
MBD1-203ENST00000339998 C8orf34Q49A92 452 aa19.7■□□□□ 0.74
MBD1-203ENST00000339998 PDZRN3Q9UPQ7 1066 aa19.7■□□□□ 0.74
MBD1-203ENST00000339998 ARHGEF10O15013 1369 aa19.7■□□□□ 0.74
MBD1-203ENST00000339998 ANP32AP39687 249 aaKnown RBP19.7■□□□□ 0.74
MBD1-203ENST00000339998 NBPF6Q5VWK0 638 aa19.69■□□□□ 0.74
MBD1-203ENST00000339998 NBPF4Q96M43 638 aa19.69■□□□□ 0.74
MBD1-203ENST00000339998 CHL1O00533 1208 aa19.69■□□□□ 0.74
MBD1-203ENST00000339998 IPO8O15397 1037 aaKnown RBP19.68■□□□□ 0.74
MBD1-203ENST00000339998 RTF1Q92541 710 aaKnown RBP19.68■□□□□ 0.74
MBD1-203ENST00000339998 DDX19BQ9UMR2 479 aa19.68■□□□□ 0.74
MBD1-203ENST00000339998 NECTIN2Q92692 538 aa19.68■□□□□ 0.74
MBD1-203ENST00000339998 BCL11AQ9H165 835 aa19.68■□□□□ 0.74
MBD1-203ENST00000339998 KDRP35968 1356 aa19.68■□□□□ 0.74
MBD1-203ENST00000339998 ZBTB40Q9NUA8 1239 aa19.67■□□□□ 0.74
MBD1-203ENST00000339998 GCP02774 474 aa19.66■□□□□ 0.74
MBD1-203ENST00000339998 KRT28Q7Z3Y7 464 aa19.66■□□□□ 0.74
MBD1-203ENST00000339998 TSPYL4Q9UJ04 414 aa19.66■□□□□ 0.74
MBD1-203ENST00000339998 RWDD1Q9H446 243 aaPredicted RBP19.65■□□□□ 0.74
MBD1-203ENST00000339998 CRB1P82279 1406 aa19.65■□□□□ 0.74
MBD1-203ENST00000339998 TMEM94Q12767 1356 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms