RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 SURF6O75683 361 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-201ENST00000339861 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-201ENST00000339861 ERCC6L2Q5T890 1561 aa13.54□□□□□ -0.24
SEMA4D-201ENST00000339861 ZNF330Q9Y3S2 320 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-201ENST00000339861 VAMP4O75379 141 aa13.54□□□□□ -0.24
SEMA4D-201ENST00000339861 SMC5Q8IY18 1101 aa13.54□□□□□ -0.24
SEMA4D-201ENST00000339861 OTUD7AQ8TE49 926 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-201ENST00000339861 RBM33Q96EV2 1170 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-201ENST00000339861 BMP2KLQ5H9B9 411 aa13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 FAM13BQ9NYF5 915 aa13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 USP19O94966 1318 aa13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 MEIS3Q99687 375 aa13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 RRAGDQ9NQL2 400 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 HSP90AB2PQ58FF8 381 aa13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
SEMA4D-201ENST00000339861 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.24
SEMA4D-201ENST00000339861 INSRP06213 1382 aa13.52□□□□□ -0.24
SEMA4D-201ENST00000339861 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.25
SEMA4D-201ENST00000339861 AIMP1Q12904 312 aaKnown RBP13.52□□□□□ -0.25
SEMA4D-201ENST00000339861 MRPL50Q8N5N7 158 aaKnown RBP13.52□□□□□ -0.25
SEMA4D-201ENST00000339861 BCL11BQ9C0K0 894 aaPredicted RBP13.52□□□□□ -0.25
SEMA4D-201ENST00000339861 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
SEMA4D-201ENST00000339861 TEFQ10587 303 aa13.51□□□□□ -0.25
SEMA4D-201ENST00000339861 ABCC11Q96J66 1382 aa13.51□□□□□ -0.25
SEMA4D-201ENST00000339861 RBM10P98175 930 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-201ENST00000339861 USHBP1Q8N6Y0 703 aa13.51□□□□□ -0.25
SEMA4D-201ENST00000339861 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
SEMA4D-201ENST00000339861 NUTM1Q86Y26 1132 aa13.51□□□□□ -0.25
SEMA4D-201ENST00000339861 GDPD2Q9HCC8 539 aa13.51□□□□□ -0.25
SEMA4D-201ENST00000339861 C9orf78Q9NZ63 289 aaPredicted RBP13.51□□□□□ -0.25
SEMA4D-201ENST00000339861 ERC2O15083 957 aa13.5□□□□□ -0.25
SEMA4D-201ENST00000339861 GNAI2P04899 355 aa13.5□□□□□ -0.25
SEMA4D-201ENST00000339861 RBM27Q9P2N5 1060 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-201ENST00000339861 VPS37CA5D8V6 355 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-201ENST00000339861 DTNBO60941 627 aa13.5□□□□□ -0.25
SEMA4D-201ENST00000339861 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-201ENST00000339861 SYAP1Q96A49 352 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-201ENST00000339861 FOXO3O43524 673 aa13.5□□□□□ -0.25
SEMA4D-201ENST00000339861 DIAPH3Q9NSV4 1193 aa13.5□□□□□ -0.25
SEMA4D-201ENST00000339861 ZBTB7BO15156 539 aaPredicted RBP13.49□□□□□ -0.25
SEMA4D-201ENST00000339861 KIAA2012Q0VF49 1180 aa13.49□□□□□ -0.25
SEMA4D-201ENST00000339861 SYCE3A1L190 88 aa13.49□□□□□ -0.25
SEMA4D-201ENST00000339861 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
SEMA4D-201ENST00000339861 FOSBP53539 338 aa13.48□□□□□ -0.25
SEMA4D-201ENST00000339861 SDSP20132 328 aa13.48□□□□□ -0.25
SEMA4D-201ENST00000339861 HDGFL1Q5TGJ6 251 aa13.48□□□□□ -0.25
SEMA4D-201ENST00000339861 ATP7AQ04656 1500 aa13.48□□□□□ -0.25
SEMA4D-201ENST00000339861 NSD2O96028 1365 aa13.48□□□□□ -0.25
SEMA4D-201ENST00000339861 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-201ENST00000339861 BAG4O95429 457 aaKnown RBP13.47□□□□□ -0.25
SEMA4D-201ENST00000339861 CSB-PGBD3P0DP91 1061 aa13.47□□□□□ -0.25
SEMA4D-201ENST00000339861 CEBPAP49715 358 aaPredicted RBP13.47□□□□□ -0.25
SEMA4D-201ENST00000339861 LRRCC1Q9C099 1032 aa13.47□□□□□ -0.25
SEMA4D-201ENST00000339861 FIBPO43427 364 aa13.47□□□□□ -0.25
SEMA4D-201ENST00000339861 RPAP2Q8IXW5 612 aaPredicted RBP13.47□□□□□ -0.25
SEMA4D-201ENST00000339861 PREX2Q70Z35 1606 aa13.47□□□□□ -0.25
SEMA4D-201ENST00000339861 ZGPATQ8N5A5 531 aaKnown RBP13.47□□□□□ -0.25
SEMA4D-201ENST00000339861 CHAMP1Q96JM3 812 aa13.47□□□□□ -0.25
SEMA4D-201ENST00000339861 IL16Q14005 1332 aa13.47□□□□□ -0.25
SEMA4D-201ENST00000339861 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.25
SEMA4D-201ENST00000339861 ANXA1P04083 346 aa13.46□□□□□ -0.25
SEMA4D-201ENST00000339861 NPATQ14207 1427 aa13.46□□□□□ -0.25
SEMA4D-201ENST00000339861 CROCC2H7BZ55 1655 aa13.46□□□□□ -0.25
SEMA4D-201ENST00000339861 HSP90B1P14625 803 aaKnown RBP13.46□□□□□ -0.25
SEMA4D-201ENST00000339861 CD2BP2O95400 341 aaKnown RBP13.46□□□□□ -0.26
SEMA4D-201ENST00000339861 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.26
SEMA4D-201ENST00000339861 XPCQ01831 940 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-201ENST00000339861 TTC22Q5TAA0 569 aa13.45□□□□□ -0.26
SEMA4D-201ENST00000339861 GNAI3P08754 354 aa13.45□□□□□ -0.26
SEMA4D-201ENST00000339861 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-201ENST00000339861 IFIT2P09913 472 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-201ENST00000339861 CWC27Q6UX04 472 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 PLEKHM2Q8IWE5 1019 aa13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 PLEKHF1Q96S99 279 aa13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 SMC3Q9UQE7 1217 aa13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 MYO5CQ9NQX4 1742 aa13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 SRGAP3O43295 1099 aa13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 ZRSR1Q15695 479 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 LRRFIP2Q9Y608 721 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 EIF4A2Q14240 407 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 SIL1Q9H173 461 aa13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 ANTXR1Q9H6X2 564 aa13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 KDM5AP29375 1690 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-201ENST00000339861 ZNF518AQ6AHZ1 1483 aa13.43□□□□□ -0.26
SEMA4D-201ENST00000339861 G2E3Q7L622 706 aa13.43□□□□□ -0.26
SEMA4D-201ENST00000339861 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
SEMA4D-201ENST00000339861 PSME1Q06323 249 aa13.43□□□□□ -0.26
SEMA4D-201ENST00000339861 CCDC173Q0VFZ6 552 aa13.43□□□□□ -0.26
SEMA4D-201ENST00000339861 FBXW7Q969H0 707 aa13.43□□□□□ -0.26
SEMA4D-201ENST00000339861 GPATCH3Q96I76 525 aa13.43□□□□□ -0.26
SEMA4D-201ENST00000339861 SYNMO15061 1565 aa13.42□□□□□ -0.26
SEMA4D-201ENST00000339861 MX1P20591 662 aa13.42□□□□□ -0.26
SEMA4D-201ENST00000339861 ACEP12821 1306 aa13.42□□□□□ -0.26
SEMA4D-201ENST00000339861 POLR1AO95602 1720 aaPredicted RBP13.42□□□□□ -0.26
SEMA4D-201ENST00000339861 C1orf141Q5JVX7 400 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms