RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 REC8O95072 547 aa17.3■□□□□ 0.36
PCDH8-201ENST00000338862 NPC1L1Q9UHC9 1359 aa17.29■□□□□ 0.36
PCDH8-201ENST00000338862 ATP10AO60312 1499 aa17.29■□□□□ 0.36
PCDH8-201ENST00000338862 FKBP5Q13451 457 aaPredicted RBP17.29■□□□□ 0.36
PCDH8-201ENST00000338862 UQCRHLA0A096LP55 91 aa17.29■□□□□ 0.36
PCDH8-201ENST00000338862 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
PCDH8-201ENST00000338862 UQCRHP07919 91 aa17.29■□□□□ 0.36
PCDH8-201ENST00000338862 SDSP20132 328 aa17.29■□□□□ 0.36
PCDH8-201ENST00000338862 RBM25P49756 843 aaKnown RBP17.29■□□□□ 0.36
PCDH8-201ENST00000338862 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
PCDH8-201ENST00000338862 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.28■□□□□ 0.36
PCDH8-201ENST00000338862 MEIS3Q99687 375 aa17.28■□□□□ 0.36
PCDH8-201ENST00000338862 RBSNQ9H1K0 784 aa17.28■□□□□ 0.36
PCDH8-201ENST00000338862 AEBP1Q8IUX7 1158 aa17.28■□□□□ 0.36
PCDH8-201ENST00000338862 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
PCDH8-201ENST00000338862 HMMRO75330 724 aa17.27■□□□□ 0.36
PCDH8-201ENST00000338862 EIF2S2P20042 333 aaKnown RBP17.27■□□□□ 0.35
PCDH8-201ENST00000338862 STK31Q9BXU1 1019 aa17.27■□□□□ 0.35
PCDH8-201ENST00000338862 KIAA2012Q0VF49 1180 aa17.26■□□□□ 0.35
PCDH8-201ENST00000338862 SNX21Q969T3 373 aa17.26■□□□□ 0.35
PCDH8-201ENST00000338862 TTC37Q6PGP7 1564 aa17.26■□□□□ 0.35
PCDH8-201ENST00000338862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCDH8-201ENST00000338862 GSPT1P15170 499 aaKnown RBP17.26■□□□□ 0.35
PCDH8-201ENST00000338862 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
PCDH8-201ENST00000338862 ABCA8O94911 1581 aa17.26■□□□□ 0.35
PCDH8-201ENST00000338862 KLHL40Q2TBA0 621 aa17.25■□□□□ 0.35
PCDH8-201ENST00000338862 POLKQ9UBT6 870 aa17.25■□□□□ 0.35
PCDH8-201ENST00000338862 TSPYL4Q9UJ04 414 aa17.25■□□□□ 0.35
PCDH8-201ENST00000338862 MAST1Q9Y2H9 1570 aa17.25■□□□□ 0.35
PCDH8-201ENST00000338862 FIBPO43427 364 aa17.25■□□□□ 0.35
PCDH8-201ENST00000338862 ALDH1L2Q3SY69 923 aa17.25■□□□□ 0.35
PCDH8-201ENST00000338862 CROCC2H7BZ55 1655 aa17.25■□□□□ 0.35
PCDH8-201ENST00000338862 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
PCDH8-201ENST00000338862 DRC7Q8IY82 874 aa17.25■□□□□ 0.35
PCDH8-201ENST00000338862 LMOD3Q0VAK6 560 aa17.24■□□□□ 0.35
PCDH8-201ENST00000338862 CCDC9Q9Y3X0 531 aaKnown RBP17.24■□□□□ 0.35
PCDH8-201ENST00000338862 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
PCDH8-201ENST00000338862 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
PCDH8-201ENST00000338862 TSC1Q92574 1164 aa17.23■□□□□ 0.35
PCDH8-201ENST00000338862 TPM2P07951 284 aa17.23■□□□□ 0.35
PCDH8-201ENST00000338862 TTC22Q5TAA0 569 aa17.23■□□□□ 0.35
PCDH8-201ENST00000338862 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
PCDH8-201ENST00000338862 E9PCH4 1651 aa17.23■□□□□ 0.35
PCDH8-201ENST00000338862 ADGRL1O94910 1474 aa17.23■□□□□ 0.35
PCDH8-201ENST00000338862 ERC2O15083 957 aa17.23■□□□□ 0.35
PCDH8-201ENST00000338862 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
PCDH8-201ENST00000338862 ANKRD36BQ8N2N9 1353 aa17.22■□□□□ 0.35
PCDH8-201ENST00000338862 FANCAO15360 1455 aa17.22■□□□□ 0.35
PCDH8-201ENST00000338862 ZNF692Q9BU19 519 aaPredicted RBP17.22■□□□□ 0.35
PCDH8-201ENST00000338862 ARHGEF5Q12774 1597 aa17.22■□□□□ 0.35
PCDH8-201ENST00000338862 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
PCDH8-201ENST00000338862 LMOD2Q6P5Q4 547 aa17.21■□□□□ 0.35
PCDH8-201ENST00000338862 VPS37CA5D8V6 355 aaPredicted RBP17.21■□□□□ 0.35
PCDH8-201ENST00000338862 C17orf53Q8N3J3 647 aaPredicted RBP17.21■□□□□ 0.35
PCDH8-201ENST00000338862 ISY1Q9ULR0 285 aaKnown RBP17.21■□□□□ 0.35
PCDH8-201ENST00000338862 AMPHP49418 695 aa17.2■□□□□ 0.34
PCDH8-201ENST00000338862 ABCC11Q96J66 1382 aa17.2■□□□□ 0.34
PCDH8-201ENST00000338862 SYAP1Q96A49 352 aaPredicted RBP17.2■□□□□ 0.34
PCDH8-201ENST00000338862 KIF2CQ99661 725 aa17.2■□□□□ 0.34
PCDH8-201ENST00000338862 SYNMO15061 1565 aa17.2■□□□□ 0.34
PCDH8-201ENST00000338862 USP25Q9UHP3 1055 aa17.19■□□□□ 0.34
PCDH8-201ENST00000338862 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
PCDH8-201ENST00000338862 GOLGA6L4A6NEF3 574 aa17.19■□□□□ 0.34
PCDH8-201ENST00000338862 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
PCDH8-201ENST00000338862 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
PCDH8-201ENST00000338862 FOSBP53539 338 aa17.18■□□□□ 0.34
PCDH8-201ENST00000338862 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
PCDH8-201ENST00000338862 FOXO3O43524 673 aa17.18■□□□□ 0.34
PCDH8-201ENST00000338862 TMX3Q96JJ7 454 aa17.18■□□□□ 0.34
PCDH8-201ENST00000338862 FBXW7Q969H0 707 aa17.18■□□□□ 0.34
PCDH8-201ENST00000338862 TSPY26PQ9H489 355 aa17.18■□□□□ 0.34
PCDH8-201ENST00000338862 SURF6O75683 361 aaKnown RBP17.17■□□□□ 0.34
PCDH8-201ENST00000338862 CFAP44Q96MT7 982 aa17.17■□□□□ 0.34
PCDH8-201ENST00000338862 IFT57Q9NWB7 429 aa17.17■□□□□ 0.34
PCDH8-201ENST00000338862 TMEM63CQ9P1W3 806 aa17.17■□□□□ 0.34
PCDH8-201ENST00000338862 LMBRD1Q9NUN5 540 aa17.17■□□□□ 0.34
PCDH8-201ENST00000338862 JARID2Q92833 1246 aaPredicted RBP17.16■□□□□ 0.34
PCDH8-201ENST00000338862 KDM5AP29375 1690 aaKnown RBP17.16■□□□□ 0.34
PCDH8-201ENST00000338862 NLRP1Q9C000 1473 aa17.16■□□□□ 0.34
PCDH8-201ENST00000338862 G2E3Q7L622 706 aa17.16■□□□□ 0.34
PCDH8-201ENST00000338862 CD109Q6YHK3 1445 aa17.16■□□□□ 0.34
PCDH8-201ENST00000338862 CDC42BPBQ9Y5S2 1711 aa17.16■□□□□ 0.34
PCDH8-201ENST00000338862 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
PCDH8-201ENST00000338862 ZNF518AQ6AHZ1 1483 aa17.15■□□□□ 0.34
PCDH8-201ENST00000338862 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
PCDH8-201ENST00000338862 CCDC39Q9UFE4 941 aa17.15■□□□□ 0.34
PCDH8-201ENST00000338862 ZHX1Q9UKY1 873 aaPredicted RBP17.15■□□□□ 0.34
PCDH8-201ENST00000338862 FERMT3Q86UX7 667 aa17.14■□□□□ 0.34
PCDH8-201ENST00000338862 GPT2Q8TD30 523 aa17.14■□□□□ 0.34
PCDH8-201ENST00000338862 CPA1P15085 419 aa17.14■□□□□ 0.33
PCDH8-201ENST00000338862 HSP90AB2PQ58FF8 381 aa17.14■□□□□ 0.33
PCDH8-201ENST00000338862 NGDNQ8NEJ9 315 aaKnown RBP17.14■□□□□ 0.33
PCDH8-201ENST00000338862 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.33
PCDH8-201ENST00000338862 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
PCDH8-201ENST00000338862 FGD1P98174 961 aa17.14■□□□□ 0.33
PCDH8-201ENST00000338862 DCTPP1Q9H773 170 aa17.14■□□□□ 0.33
PCDH8-201ENST00000338862 CWC27Q6UX04 472 aaKnown RBP17.13■□□□□ 0.33
PCDH8-201ENST00000338862 PDCL3Q9H2J4 239 aa17.13■□□□□ 0.33
PCDH8-201ENST00000338862 IL16Q14005 1332 aa17.13■□□□□ 0.33
PCDH8-201ENST00000338862 CEP85Q6P2H3 762 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms