RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 DZIP1LQ8IYY4 767 aaKnown RBP29.66■■■□□ 2.34
CLPTM1-201ENST00000337392 NGDNQ8NEJ9 315 aaKnown RBP29.66■■■□□ 2.34
CLPTM1-201ENST00000337392 ITPRIPQ8IWB1 547 aa29.64■■■□□ 2.34
CLPTM1-201ENST00000337392 TBX22Q9Y458 520 aa29.64■■■□□ 2.34
CLPTM1-201ENST00000337392 USP6P35125 1406 aa29.64■■■□□ 2.34
CLPTM1-201ENST00000337392 CDK12Q9NYV4 1490 aaPredicted RBP29.64■■■□□ 2.34
CLPTM1-201ENST00000337392 PLEKHG3A1L390 1219 aa29.63■■■□□ 2.33
CLPTM1-201ENST00000337392 PLEKHG5O94827 1062 aa29.63■■■□□ 2.33
CLPTM1-201ENST00000337392 NBR1Q14596 966 aa29.63■■■□□ 2.33
CLPTM1-201ENST00000337392 MVPQ14764 893 aaKnown RBP29.63■■■□□ 2.33
CLPTM1-201ENST00000337392 AATKQ6ZMQ8 1374 aa29.63■■■□□ 2.33
CLPTM1-201ENST00000337392 ARHGAP23Q9P227 1491 aa29.62■■■□□ 2.33
CLPTM1-201ENST00000337392 PNNQ9H307 717 aaKnown RBP29.62■■■□□ 2.33
CLPTM1-201ENST00000337392 SLIT1O75093 1534 aa29.61■■■□□ 2.33
CLPTM1-201ENST00000337392 TMEM57Q8N5G2 664 aa29.61■■■□□ 2.33
CLPTM1-201ENST00000337392 MBIPQ9NS73 344 aa29.61■■■□□ 2.33
CLPTM1-201ENST00000337392 ZBTB47Q9UFB7 747 aaPredicted RBP29.61■■■□□ 2.33
CLPTM1-201ENST00000337392 SLC4A3P48751 1232 aa29.6■■■□□ 2.33
CLPTM1-201ENST00000337392 KRT24Q2M2I5 525 aa29.6■■■□□ 2.33
CLPTM1-201ENST00000337392 NCBP3Q53F19 620 aaKnown RBP29.6■■■□□ 2.33
CLPTM1-201ENST00000337392 ATF7IPQ6VMQ6 1270 aa29.59■■■□□ 2.33
CLPTM1-201ENST00000337392 IL16Q14005 1332 aa29.59■■■□□ 2.33
CLPTM1-201ENST00000337392 MCM10Q7L590 875 aa29.58■■■□□ 2.33
CLPTM1-201ENST00000337392 OVOS2A0A0J9YW53 1432 aa29.57■■■□□ 2.32
CLPTM1-201ENST00000337392 OVOS2Q6IE36 1432 aa29.57■■■□□ 2.32
CLPTM1-201ENST00000337392 FAM161AQ3B820 660 aa29.56■■■□□ 2.32
CLPTM1-201ENST00000337392 C8orf58Q8NAV2 365 aa29.56■■■□□ 2.32
CLPTM1-201ENST00000337392 MAP3K19Q56UN5 1328 aa29.56■■■□□ 2.32
CLPTM1-201ENST00000337392 TOPAZ1Q8N9V7 1692 aa29.55■■■□□ 2.32
CLPTM1-201ENST00000337392 FOXO3O43524 673 aa29.55■■■□□ 2.32
CLPTM1-201ENST00000337392 NRKQ7Z2Y5 1582 aa29.55■■■□□ 2.32
CLPTM1-201ENST00000337392 DLG5Q8TDM6 1919 aa29.55■■■□□ 2.32
CLPTM1-201ENST00000337392 PEAK1Q9H792 1746 aa29.54■■■□□ 2.32
CLPTM1-201ENST00000337392 SEC24BO95487 1268 aa29.53■■■□□ 2.32
CLPTM1-201ENST00000337392 C14orf37Q86TY3 774 aa29.53■■■□□ 2.32
CLPTM1-201ENST00000337392 PDZRN3Q9UPQ7 1066 aa29.53■■■□□ 2.32
CLPTM1-201ENST00000337392 DIP2AQ14689 1571 aa29.53■■■□□ 2.32
CLPTM1-201ENST00000337392 VAMP4O75379 141 aa29.53■■■□□ 2.32
CLPTM1-201ENST00000337392 MIS18AQ9NYP9 233 aa29.52■■■□□ 2.32
CLPTM1-201ENST00000337392 RIMS1Q86UR5 1692 aaKnown RBP29.52■■■□□ 2.32
CLPTM1-201ENST00000337392 NLRP6P59044 892 aa29.51■■■□□ 2.31
CLPTM1-201ENST00000337392 CT47B1P0C2W7 299 aaPredicted RBP29.5■■■□□ 2.31
CLPTM1-201ENST00000337392 C1orf115Q9H7X2 142 aa29.5■■■□□ 2.31
CLPTM1-201ENST00000337392 SSH2Q76I76 1423 aa29.49■■■□□ 2.31
CLPTM1-201ENST00000337392 PTCH1Q13635 1447 aa29.48■■■□□ 2.31
CLPTM1-201ENST00000337392 LTV1Q96GA3 475 aaPredicted RBP29.48■■■□□ 2.31
CLPTM1-201ENST00000337392 CEP170BQ9Y4F5 1589 aaPredicted RBP29.47■■■□□ 2.31
CLPTM1-201ENST00000337392 ZNF853P0CG23 659 aa29.47■■■□□ 2.31
CLPTM1-201ENST00000337392 GNAI1P63096 354 aa29.46■■■□□ 2.31
CLPTM1-201ENST00000337392 TWISTNBQ3B726 338 aaPredicted RBP29.46■■■□□ 2.31
CLPTM1-201ENST00000337392 IFT57Q9NWB7 429 aa29.46■■■□□ 2.31
CLPTM1-201ENST00000337392 AMPHP49418 695 aa29.45■■■□□ 2.31
CLPTM1-201ENST00000337392 CFAP44Q96MT7 982 aa29.44■■■□□ 2.3
CLPTM1-201ENST00000337392 MRPL50Q8N5N7 158 aaKnown RBP29.43■■■□□ 2.3
CLPTM1-201ENST00000337392 XPCQ01831 940 aaPredicted RBP29.42■■■□□ 2.3
CLPTM1-201ENST00000337392 ABTB2Q8N961 1025 aa29.42■■■□□ 2.3
CLPTM1-201ENST00000337392 RWDD1Q9H446 243 aaPredicted RBP29.42■■■□□ 2.3
CLPTM1-201ENST00000337392 ZBTB7CA1YPR0 619 aa29.42■■■□□ 2.3
CLPTM1-201ENST00000337392 DDX19BQ9UMR2 479 aa29.42■■■□□ 2.3
CLPTM1-201ENST00000337392 KIF16BQ96L93 1317 aa29.42■■■□□ 2.3
CLPTM1-201ENST00000337392 USP31Q70CQ4 1352 aa29.41■■■□□ 2.3
CLPTM1-201ENST00000337392 ANKLE2Q86XL3 938 aa29.41■■■□□ 2.3
CLPTM1-201ENST00000337392 EYA1Q99502 592 aa29.41■■■□□ 2.3
CLPTM1-201ENST00000337392 MTHFSDQ2M296 383 aaKnown RBP29.4■■■□□ 2.3
CLPTM1-201ENST00000337392 ALDH1L2Q3SY69 923 aa29.4■■■□□ 2.3
CLPTM1-201ENST00000337392 XRN1Q8IZH2 1706 aaKnown RBP29.4■■■□□ 2.3
CLPTM1-201ENST00000337392 USHBP1Q8N6Y0 703 aa29.4■■■□□ 2.3
CLPTM1-201ENST00000337392 ZBTB40Q9NUA8 1239 aa29.4■■■□□ 2.3
CLPTM1-201ENST00000337392 PIK3C2AO00443 1686 aa29.38■■■□□ 2.29
CLPTM1-201ENST00000337392 SETD1BQ9UPS6 1966 aaKnown RBP29.37■■■□□ 2.29
CLPTM1-201ENST00000337392 IPO8O15397 1037 aaKnown RBP29.37■■■□□ 2.29
CLPTM1-201ENST00000337392 TTC21AQ8NDW8 1320 aa29.36■■■□□ 2.29
CLPTM1-201ENST00000337392 NALCNQ8IZF0 1738 aa29.36■■■□□ 2.29
CLPTM1-201ENST00000337392 CALD1Q05682 793 aaKnown RBP29.35■■■□□ 2.29
CLPTM1-201ENST00000337392 ESCO1Q5FWF5 840 aa29.35■■■□□ 2.29
CLPTM1-201ENST00000337392 LMOD3Q0VAK6 560 aa29.34■■■□□ 2.29
CLPTM1-201ENST00000337392 USP19O94966 1318 aa29.33■■■□□ 2.29
CLPTM1-201ENST00000337392 FLT4P35916 1363 aa29.32■■■□□ 2.28
CLPTM1-201ENST00000337392 PHF8Q9UPP1 1060 aa29.31■■■□□ 2.28
CLPTM1-201ENST00000337392 SBNO1A3KN83 1393 aa29.3■■■□□ 2.28
CLPTM1-201ENST00000337392 ZBTB7BO15156 539 aaPredicted RBP29.3■■■□□ 2.28
CLPTM1-201ENST00000337392 HOXC9P31274 260 aa29.3■■■□□ 2.28
CLPTM1-201ENST00000337392 ORAI2Q96SN7 254 aa29.3■■■□□ 2.28
CLPTM1-201ENST00000337392 LNPKQ9C0E8 428 aa29.29■■■□□ 2.28
CLPTM1-201ENST00000337392 AAMPQ13685 434 aa29.27■■■□□ 2.28
CLPTM1-201ENST00000337392 NECTIN2Q92692 538 aa29.27■■■□□ 2.28
CLPTM1-201ENST00000337392 ANO8Q9HCE9 1232 aaPredicted RBP29.27■■■□□ 2.28
CLPTM1-201ENST00000337392 RGPD1P0DJD0 1748 aa29.27■■■□□ 2.28
CLPTM1-201ENST00000337392 CHL1O00533 1208 aa29.26■■■□□ 2.28
CLPTM1-201ENST00000337392 HDAC1Q13547 482 aaPredicted RBP29.26■■■□□ 2.27
CLPTM1-201ENST00000337392 LMOD2Q6P5Q4 547 aa29.26■■■□□ 2.27
CLPTM1-201ENST00000337392 PIK3R4Q99570 1358 aa29.26■■■□□ 2.27
CLPTM1-201ENST00000337392 SIRT2Q8IXJ6 389 aa29.24■■■□□ 2.27
CLPTM1-201ENST00000337392 FMN2Q9NZ56 1722 aa29.24■■■□□ 2.27
CLPTM1-201ENST00000337392 IGSF1Q8N6C5 1336 aa29.23■■■□□ 2.27
CLPTM1-201ENST00000337392 PSME1Q06323 249 aa29.23■■■□□ 2.27
CLPTM1-201ENST00000337392 ARHGEF10O15013 1369 aa29.22■■■□□ 2.27
CLPTM1-201ENST00000337392 BRPF1P55201 1214 aaPredicted RBP29.22■■■□□ 2.27
CLPTM1-201ENST00000337392 RTF1Q92541 710 aaKnown RBP29.22■■■□□ 2.27
CLPTM1-201ENST00000337392 TSPYL4Q9UJ04 414 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms