RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 USP31Q70CQ4 1352 aa21.39■■□□□ 1.01
TMEM39B-201ENST00000336294 IGHDP01880 384 aa21.39■■□□□ 1.01
TMEM39B-201ENST00000336294 LMOD3Q0VAK6 560 aa21.39■■□□□ 1.01
TMEM39B-201ENST00000336294 PMFBP1Q8TBY8 1022 aa21.39■■□□□ 1.01
TMEM39B-201ENST00000336294 IPO9Q96P70 1041 aaKnown RBP21.39■■□□□ 1.01
TMEM39B-201ENST00000336294 ANKARQ7Z5J8 1434 aa21.38■■□□□ 1.01
TMEM39B-201ENST00000336294 FTSJ3Q8IY81 847 aaKnown RBP21.38■■□□□ 1.01
TMEM39B-201ENST00000336294 DZIP1LQ8IYY4 767 aaKnown RBP21.38■■□□□ 1.01
TMEM39B-201ENST00000336294 SSH1Q8WYL5 1049 aa21.38■■□□□ 1.01
TMEM39B-201ENST00000336294 MVPQ14764 893 aaKnown RBP21.37■■□□□ 1.01
TMEM39B-201ENST00000336294 ZNF142P52746 1687 aaPredicted RBP21.36■■□□□ 1.01
TMEM39B-201ENST00000336294 ZNF428Q96B54 188 aa21.36■■□□□ 1.01
TMEM39B-201ENST00000336294 EIF4A2Q14240 407 aaKnown RBP21.35■■□□□ 1.01
TMEM39B-201ENST00000336294 ALDH1L2Q3SY69 923 aa21.35■■□□□ 1.01
TMEM39B-201ENST00000336294 NGDNQ8NEJ9 315 aaKnown RBP21.35■■□□□ 1.01
TMEM39B-201ENST00000336294 KIF16BQ96L93 1317 aa21.34■■□□□ 1.01
TMEM39B-201ENST00000336294 KCNA6P17658 529 aa21.34■■□□□ 1.01
TMEM39B-201ENST00000336294 GNAI1P63096 354 aa21.34■■□□□ 1.01
TMEM39B-201ENST00000336294 IFT57Q9NWB7 429 aa21.34■■□□□ 1.01
TMEM39B-201ENST00000336294 RGPD8O14715 1765 aaPredicted RBP21.34■■□□□ 1.01
TMEM39B-201ENST00000336294 LAS1LQ9Y4W2 734 aaKnown RBP21.34■■□□□ 1.01
TMEM39B-201ENST00000336294 PEAK1Q9H792 1746 aa21.33■■□□□ 1.01
TMEM39B-201ENST00000336294 ATF7IPQ6VMQ6 1270 aa21.33■■□□□ 1.01
TMEM39B-201ENST00000336294 FMN2Q9NZ56 1722 aa21.33■■□□□ 1
TMEM39B-201ENST00000336294 IPO8O15397 1037 aaKnown RBP21.32■■□□□ 1
TMEM39B-201ENST00000336294 TRIM27P14373 513 aa21.32■■□□□ 1
TMEM39B-201ENST00000336294 RGS3P49796 1198 aa21.32■■□□□ 1
TMEM39B-201ENST00000336294 FAM161AQ3B820 660 aa21.32■■□□□ 1
TMEM39B-201ENST00000336294 ANKLE2Q86XL3 938 aa21.32■■□□□ 1
TMEM39B-201ENST00000336294 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
TMEM39B-201ENST00000336294 NPM2Q86SE8 214 aaKnown RBP21.32■■□□□ 1
TMEM39B-201ENST00000336294 ADAMTSL3P82987 1691 aa21.31■■□□□ 1
TMEM39B-201ENST00000336294 NOB1Q9ULX3 412 aaKnown RBP21.31■■□□□ 1
TMEM39B-201ENST00000336294 PCDHB15Q9Y5E8 787 aa21.31■■□□□ 1
TMEM39B-201ENST00000336294 VIRMAQ69YN4 1812 aaKnown RBP21.3■■□□□ 1
TMEM39B-201ENST00000336294 ZNF853P0CG23 659 aa21.3■■□□□ 1
TMEM39B-201ENST00000336294 THUMPD2Q9BTF0 503 aaKnown RBP21.3■■□□□ 1
TMEM39B-201ENST00000336294 RGPD1P0DJD0 1748 aa21.3■■□□□ 1
TMEM39B-201ENST00000336294 SULT6B1Q6IMI4 303 aa21.29■■□□□ 1
TMEM39B-201ENST00000336294 RWDD1Q9H446 243 aaPredicted RBP21.29■■□□□ 1
TMEM39B-201ENST00000336294 DDX19BQ9UMR2 479 aa21.29■■□□□ 1
TMEM39B-201ENST00000336294 BRPF1P55201 1214 aaPredicted RBP21.29■■□□□ 1
TMEM39B-201ENST00000336294 PIK3C2AO00443 1686 aa21.28■■□□□ 1
TMEM39B-201ENST00000336294 CHD2O14647 1828 aaKnown RBP21.28■■□□□ 1
TMEM39B-201ENST00000336294 ZBTB47Q9UFB7 747 aaPredicted RBP21.28■■□□□ 1
TMEM39B-201ENST00000336294 SBNO1A3KN83 1393 aa21.27■■□□□ 1
TMEM39B-201ENST00000336294 HSP90AB2PQ58FF8 381 aa21.27■■□□□ 1
TMEM39B-201ENST00000336294 CFAP44Q96MT7 982 aa21.27■■□□□ 1
TMEM39B-201ENST00000336294 FLT4P35916 1363 aa21.27■■□□□ 1
TMEM39B-201ENST00000336294 C8orf34Q49A92 452 aa21.27■□□□□ 0.99
TMEM39B-201ENST00000336294 AEBP1Q8IUX7 1158 aa21.27■□□□□ 0.99
TMEM39B-201ENST00000336294 MBIPQ9NS73 344 aa21.27■□□□□ 0.99
TMEM39B-201ENST00000336294 MAP3K19Q56UN5 1328 aa21.26■□□□□ 0.99
TMEM39B-201ENST00000336294 ARHGEF10O15013 1369 aa21.26■□□□□ 0.99
TMEM39B-201ENST00000336294 ITPRIPQ8IWB1 547 aa21.26■□□□□ 0.99
TMEM39B-201ENST00000336294 SOX12O15370 315 aa21.25■□□□□ 0.99
TMEM39B-201ENST00000336294 VAMP4O75379 141 aa21.25■□□□□ 0.99
TMEM39B-201ENST00000336294 USP54Q70EL1 1684 aa21.24■□□□□ 0.99
TMEM39B-201ENST00000336294 TMEM57Q8N5G2 664 aa21.23■□□□□ 0.99
TMEM39B-201ENST00000336294 FAM83GA6ND36 823 aa21.22■□□□□ 0.99
TMEM39B-201ENST00000336294 PAK3O75914 559 aaPredicted RBP21.22■□□□□ 0.99
TMEM39B-201ENST00000336294 AMPHP49418 695 aa21.21■□□□□ 0.99
TMEM39B-201ENST00000336294 NLRP6P59044 892 aa21.21■□□□□ 0.99
TMEM39B-201ENST00000336294 TWISTNBQ3B726 338 aaPredicted RBP21.21■□□□□ 0.99
TMEM39B-201ENST00000336294 MRPL50Q8N5N7 158 aaKnown RBP21.21■□□□□ 0.99
TMEM39B-201ENST00000336294 TSPYL6Q8N831 410 aa21.21■□□□□ 0.99
TMEM39B-201ENST00000336294 ARHGAP45Q92619 1136 aa21.21■□□□□ 0.99
TMEM39B-201ENST00000336294 SETD1BQ9UPS6 1966 aaKnown RBP21.21■□□□□ 0.99
TMEM39B-201ENST00000336294 DDRGK1Q96HY6 314 aa21.2■□□□□ 0.98
TMEM39B-201ENST00000336294 KIF24Q5T7B8 1368 aa21.2■□□□□ 0.98
TMEM39B-201ENST00000336294 HDAC1Q13547 482 aaPredicted RBP21.2■□□□□ 0.98
TMEM39B-201ENST00000336294 DCTN1Q14203 1278 aa21.2■□□□□ 0.98
TMEM39B-201ENST00000336294 PDZRN3Q9UPQ7 1066 aa21.19■□□□□ 0.98
TMEM39B-201ENST00000336294 MARF1Q9Y4F3 1742 aaKnown RBP21.19■□□□□ 0.98
TMEM39B-201ENST00000336294 CHMP4BQ9H444 224 aaKnown RBP21.18■□□□□ 0.98
TMEM39B-201ENST00000336294 ZBTB40Q9NUA8 1239 aa21.18■□□□□ 0.98
TMEM39B-201ENST00000336294 PHF8Q9UPP1 1060 aa21.18■□□□□ 0.98
TMEM39B-201ENST00000336294 NPHP4O75161 1426 aaPredicted RBP21.17■□□□□ 0.98
TMEM39B-201ENST00000336294 ADGRL3Q9HAR2 1447 aa21.17■□□□□ 0.98
TMEM39B-201ENST00000336294 KDRP35968 1356 aa21.17■□□□□ 0.98
TMEM39B-201ENST00000336294 C8orf58Q8NAV2 365 aa21.17■□□□□ 0.98
TMEM39B-201ENST00000336294 IGSF1Q8N6C5 1336 aa21.16■□□□□ 0.98
TMEM39B-201ENST00000336294 HAP1P54257 671 aaPredicted RBP21.16■□□□□ 0.98
TMEM39B-201ENST00000336294 ELL2O00472 640 aaPredicted RBP21.15■□□□□ 0.98
TMEM39B-201ENST00000336294 ABTB2Q8N961 1025 aa21.15■□□□□ 0.98
TMEM39B-201ENST00000336294 CHL1O00533 1208 aa21.14■□□□□ 0.97
TMEM39B-201ENST00000336294 MCM10Q7L590 875 aa21.13■□□□□ 0.97
TMEM39B-201ENST00000336294 EYA1Q99502 592 aa21.13■□□□□ 0.97
TMEM39B-201ENST00000336294 HOXC9P31274 260 aa21.13■□□□□ 0.97
TMEM39B-201ENST00000336294 KIAA0232Q92628 1395 aa21.13■□□□□ 0.97
TMEM39B-201ENST00000336294 ABCC4O15439 1325 aa21.12■□□□□ 0.97
TMEM39B-201ENST00000336294 NUTM2GQ5VZR2 741 aa21.12■□□□□ 0.97
TMEM39B-201ENST00000336294 API5Q9BZZ5 524 aaKnown RBP21.12■□□□□ 0.97
TMEM39B-201ENST00000336294 CRB1P82279 1406 aa21.12■□□□□ 0.97
TMEM39B-201ENST00000336294 GAS2L2Q8NHY3 880 aa21.11■□□□□ 0.97
TMEM39B-201ENST00000336294 RTL1A6NKG5 1358 aa21.11■□□□□ 0.97
TMEM39B-201ENST00000336294 MTHFSDQ2M296 383 aaKnown RBP21.11■□□□□ 0.97
TMEM39B-201ENST00000336294 RTF1Q92541 710 aaKnown RBP21.11■□□□□ 0.97
TMEM39B-201ENST00000336294 SMC5Q8IY18 1101 aa21.1■□□□□ 0.97
TMEM39B-201ENST00000336294 C14orf37Q86TY3 774 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms