RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
AP1S3-201ENST00000334271 RAD21O60216 631 aa13.75□□□□□ -0.21
AP1S3-201ENST00000334271 GGNBP2Q9H3C7 697 aa13.75□□□□□ -0.21
AP1S3-201ENST00000334271 NGDNQ8NEJ9 315 aaKnown RBP13.75□□□□□ -0.21
AP1S3-201ENST00000334271 ADAMTS8Q9UP79 889 aa13.75□□□□□ -0.21
AP1S3-201ENST00000334271 PHF8Q9UPP1 1060 aa13.75□□□□□ -0.21
AP1S3-201ENST00000334271 KCTD17Q8N5Z5 321 aa13.74□□□□□ -0.21
AP1S3-201ENST00000334271 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
AP1S3-201ENST00000334271 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
AP1S3-201ENST00000334271 RGS22Q8NE09 1264 aa13.74□□□□□ -0.21
AP1S3-201ENST00000334271 CNGB1Q14028 1251 aaPredicted RBP13.73□□□□□ -0.21
AP1S3-201ENST00000334271 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
AP1S3-201ENST00000334271 PHRF1Q9P1Y6 1649 aaKnown RBP13.73□□□□□ -0.21
AP1S3-201ENST00000334271 C1orf167Q5SNV9 1468 aa13.72□□□□□ -0.21
AP1S3-201ENST00000334271 MSH6P52701 1360 aa13.72□□□□□ -0.21
AP1S3-201ENST00000334271 DEKP35659 375 aaKnown RBP13.72□□□□□ -0.21
AP1S3-201ENST00000334271 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
AP1S3-201ENST00000334271 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
AP1S3-201ENST00000334271 RUNDC1Q96C34 613 aa13.72□□□□□ -0.21
AP1S3-201ENST00000334271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.71□□□□□ -0.21
AP1S3-201ENST00000334271 TMEM94Q12767 1356 aa13.71□□□□□ -0.21
AP1S3-201ENST00000334271 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.22
AP1S3-201ENST00000334271 CC2D2BQ6DHV5 1058 aa13.71□□□□□ -0.22
AP1S3-201ENST00000334271 FAM177A1Q8N128 213 aaPredicted RBP13.71□□□□□ -0.22
AP1S3-201ENST00000334271 POLKQ9UBT6 870 aa13.71□□□□□ -0.22
AP1S3-201ENST00000334271 ATF3P18847 181 aa13.7□□□□□ -0.22
AP1S3-201ENST00000334271 GLIPR1L2Q4G1C9 344 aa13.7□□□□□ -0.22
AP1S3-201ENST00000334271 RTL1A6NKG5 1358 aa13.7□□□□□ -0.22
AP1S3-201ENST00000334271 TRPM3Q9HCF6 1732 aaPredicted RBP13.7□□□□□ -0.22
AP1S3-201ENST00000334271 IQSEC2Q5JU85 1478 aa13.7□□□□□ -0.22
AP1S3-201ENST00000334271 XIRP1Q702N8 1843 aaKnown RBP13.7□□□□□ -0.22
AP1S3-201ENST00000334271 NME9Q86XW9 330 aa13.7□□□□□ -0.22
AP1S3-201ENST00000334271 MTMR7Q9Y216 660 aa13.7□□□□□ -0.22
AP1S3-201ENST00000334271 FCHSD2O94868 740 aa13.69□□□□□ -0.22
AP1S3-201ENST00000334271 RBM25P49756 843 aaKnown RBP13.69□□□□□ -0.22
AP1S3-201ENST00000334271 PRDM16Q9HAZ2 1276 aa13.69□□□□□ -0.22
AP1S3-201ENST00000334271 MARF1Q9Y4F3 1742 aaKnown RBP13.69□□□□□ -0.22
AP1S3-201ENST00000334271 ZNF521Q96K83 1311 aa13.69□□□□□ -0.22
AP1S3-201ENST00000334271 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
AP1S3-201ENST00000334271 ZMYND15Q9H091 742 aa13.68□□□□□ -0.22
AP1S3-201ENST00000334271 PSME1Q06323 249 aa13.68□□□□□ -0.22
AP1S3-201ENST00000334271 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
AP1S3-201ENST00000334271 ABCC6O95255 1503 aa13.68□□□□□ -0.22
AP1S3-201ENST00000334271 SBNO1A3KN83 1393 aa13.68□□□□□ -0.22
AP1S3-201ENST00000334271 KCNH5Q8NCM2 988 aa13.67□□□□□ -0.22
AP1S3-201ENST00000334271 SLIT3O75094 1523 aa13.66□□□□□ -0.22
AP1S3-201ENST00000334271 HSPA2P54652 639 aa13.66□□□□□ -0.22
AP1S3-201ENST00000334271 FLT4P35916 1363 aa13.66□□□□□ -0.22
AP1S3-201ENST00000334271 PMFBP1Q8TBY8 1022 aa13.66□□□□□ -0.22
AP1S3-201ENST00000334271 NAP1L2Q9ULW6 460 aaPredicted RBP13.66□□□□□ -0.22
AP1S3-201ENST00000334271 ALS2Q96Q42 1657 aa13.65□□□□□ -0.22
AP1S3-201ENST00000334271 NEFMP07197 916 aa13.65□□□□□ -0.22
AP1S3-201ENST00000334271 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
AP1S3-201ENST00000334271 ESCO1Q5FWF5 840 aa13.65□□□□□ -0.22
AP1S3-201ENST00000334271 WDR63Q8IWG1 891 aa13.65□□□□□ -0.22
AP1S3-201ENST00000334271 RGPD1P0DJD0 1748 aa13.65□□□□□ -0.22
AP1S3-201ENST00000334271 FOXD4L5Q5VV16 416 aaPredicted RBP13.64□□□□□ -0.23
AP1S3-201ENST00000334271 TEX2Q8IWB9 1127 aa13.64□□□□□ -0.23
AP1S3-201ENST00000334271 FOXD4L4Q8WXT5 416 aaPredicted RBP13.64□□□□□ -0.23
AP1S3-201ENST00000334271 CHRM1P11229 460 aaPredicted RBP13.64□□□□□ -0.23
AP1S3-201ENST00000334271 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
AP1S3-201ENST00000334271 PLEKHG2Q9H7P9 1386 aa13.63□□□□□ -0.23
AP1S3-201ENST00000334271 IL13P35225 146 aa13.63□□□□□ -0.23
AP1S3-201ENST00000334271 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
AP1S3-201ENST00000334271 USP35Q9P2H5 1018 aa13.63□□□□□ -0.23
AP1S3-201ENST00000334271 RNF123Q5XPI4 1314 aa13.63□□□□□ -0.23
AP1S3-201ENST00000334271 MED1Q15648 1581 aaPredicted RBP13.63□□□□□ -0.23
AP1S3-201ENST00000334271 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
AP1S3-201ENST00000334271 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
AP1S3-201ENST00000334271 ZNF526Q8TF50 670 aaPredicted RBP13.63□□□□□ -0.23
AP1S3-201ENST00000334271 NFAT5O94916 1531 aa13.63□□□□□ -0.23
AP1S3-201ENST00000334271 ARHGEF10O15013 1369 aa13.62□□□□□ -0.23
AP1S3-201ENST00000334271 E9PSI1 815 aa13.62□□□□□ -0.23
AP1S3-201ENST00000334271 PLEKHF1Q96S99 279 aa13.62□□□□□ -0.23
AP1S3-201ENST00000334271 USP19O94966 1318 aa13.62□□□□□ -0.23
AP1S3-201ENST00000334271 IL16Q14005 1332 aa13.62□□□□□ -0.23
AP1S3-201ENST00000334271 NUTM2FA1L443 756 aa13.62□□□□□ -0.23
AP1S3-201ENST00000334271 TRMT2AQ8IZ69 625 aaKnown RBP13.62□□□□□ -0.23
AP1S3-201ENST00000334271 ABTB2Q8N961 1025 aa13.62□□□□□ -0.23
AP1S3-201ENST00000334271 PLCD4Q9BRC7 762 aa13.62□□□□□ -0.23
AP1S3-201ENST00000334271 NLRP6P59044 892 aa13.61□□□□□ -0.23
AP1S3-201ENST00000334271 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
AP1S3-201ENST00000334271 PEAK1Q9H792 1746 aa13.61□□□□□ -0.23
AP1S3-201ENST00000334271 CALD1Q05682 793 aaKnown RBP13.6□□□□□ -0.23
AP1S3-201ENST00000334271 APAF1O14727 1248 aa13.6□□□□□ -0.23
AP1S3-201ENST00000334271 LMOD3Q0VAK6 560 aa13.59□□□□□ -0.23
AP1S3-201ENST00000334271 LTN1O94822 1766 aa13.59□□□□□ -0.23
AP1S3-201ENST00000334271 CT47B1P0C2W7 299 aaPredicted RBP13.59□□□□□ -0.23
AP1S3-201ENST00000334271 SLFN5Q08AF3 891 aa13.59□□□□□ -0.23
AP1S3-201ENST00000334271 KRT28Q7Z3Y7 464 aa13.59□□□□□ -0.23
AP1S3-201ENST00000334271 TCP11L2Q8N4U5 519 aa13.59□□□□□ -0.23
AP1S3-201ENST00000334271 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
AP1S3-201ENST00000334271 PXDNQ92626 1479 aa13.58□□□□□ -0.24
AP1S3-201ENST00000334271 KDRP35968 1356 aa13.58□□□□□ -0.24
AP1S3-201ENST00000334271 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.24
AP1S3-201ENST00000334271 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
AP1S3-201ENST00000334271 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
AP1S3-201ENST00000334271 NHSL1Q5SYE7 1610 aa13.57□□□□□ -0.24
AP1S3-201ENST00000334271 TNS3Q68CZ2 1445 aa13.57□□□□□ -0.24
AP1S3-201ENST00000334271 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms