RNA–Protein interactions for RNA: ENST00000331559.9

MEIS3-201, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 2,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-201ENST00000331559 USP31Q70CQ4 1352 aa29.74■■■□□ 2.35
MEIS3-201ENST00000331559 FAM161AQ3B820 660 aa29.74■■■□□ 2.35
MEIS3-201ENST00000331559 RTL5Q5HYW3 569 aaPredicted RBP29.74■■■□□ 2.35
MEIS3-201ENST00000331559 LMOD3Q0VAK6 560 aa29.73■■■□□ 2.35
MEIS3-201ENST00000331559 C8orf34Q49A92 452 aa29.73■■■□□ 2.35
MEIS3-201ENST00000331559 PMFBP1Q8TBY8 1022 aa29.73■■■□□ 2.35
MEIS3-201ENST00000331559 NUTM2FA1L443 756 aa29.72■■■□□ 2.35
MEIS3-201ENST00000331559 RLBP1P12271 317 aa29.72■■■□□ 2.35
MEIS3-201ENST00000331559 PHACTR3Q96KR7 559 aa29.72■■■□□ 2.35
MEIS3-201ENST00000331559 ANKARQ7Z5J8 1434 aa29.72■■■□□ 2.35
MEIS3-201ENST00000331559 DDRGK1Q96HY6 314 aa29.72■■■□□ 2.35
MEIS3-201ENST00000331559 ZNF428Q96B54 188 aa29.71■■■□□ 2.35
MEIS3-201ENST00000331559 RGS3P49796 1198 aa29.71■■■□□ 2.35
MEIS3-201ENST00000331559 LAS1LQ9Y4W2 734 aaKnown RBP29.71■■■□□ 2.35
MEIS3-201ENST00000331559 FTSJ3Q8IY81 847 aaKnown RBP29.7■■■□□ 2.35
MEIS3-201ENST00000331559 DZIP1LQ8IYY4 767 aaKnown RBP29.7■■■□□ 2.35
MEIS3-201ENST00000331559 MVPQ14764 893 aaKnown RBP29.69■■■□□ 2.34
MEIS3-201ENST00000331559 IGHDP01880 384 aa29.69■■■□□ 2.34
MEIS3-201ENST00000331559 ALDH1L2Q3SY69 923 aa29.69■■■□□ 2.34
MEIS3-201ENST00000331559 SSH1Q8WYL5 1049 aa29.69■■■□□ 2.34
MEIS3-201ENST00000331559 KIF16BQ96L93 1317 aa29.68■■■□□ 2.34
MEIS3-201ENST00000331559 TNNQ9UQP3 1299 aa29.68■■■□□ 2.34
MEIS3-201ENST00000331559 ZNF142P52746 1687 aaPredicted RBP29.67■■■□□ 2.34
MEIS3-201ENST00000331559 IFT57Q9NWB7 429 aa29.67■■■□□ 2.34
MEIS3-201ENST00000331559 GNAI1P63096 354 aa29.66■■■□□ 2.34
MEIS3-201ENST00000331559 EIF4A2Q14240 407 aaKnown RBP29.65■■■□□ 2.34
MEIS3-201ENST00000331559 NGDNQ8NEJ9 315 aaKnown RBP29.65■■■□□ 2.34
MEIS3-201ENST00000331559 IPO8O15397 1037 aaKnown RBP29.64■■■□□ 2.34
MEIS3-201ENST00000331559 ATF7IPQ6VMQ6 1270 aa29.64■■■□□ 2.34
MEIS3-201ENST00000331559 KCNA6P17658 529 aa29.63■■■□□ 2.33
MEIS3-201ENST00000331559 TRIM27P14373 513 aa29.62■■■□□ 2.33
MEIS3-201ENST00000331559 BRPF1P55201 1214 aaPredicted RBP29.62■■■□□ 2.33
MEIS3-201ENST00000331559 ANKLE2Q86XL3 938 aa29.62■■■□□ 2.33
MEIS3-201ENST00000331559 FMN2Q9NZ56 1722 aa29.61■■■□□ 2.33
MEIS3-201ENST00000331559 PEAK1Q9H792 1746 aa29.61■■■□□ 2.33
MEIS3-201ENST00000331559 ZNF853P0CG23 659 aa29.6■■■□□ 2.33
MEIS3-201ENST00000331559 RWDD1Q9H446 243 aaPredicted RBP29.6■■■□□ 2.33
MEIS3-201ENST00000331559 DDX19BQ9UMR2 479 aa29.6■■■□□ 2.33
MEIS3-201ENST00000331559 NOB1Q9ULX3 412 aaKnown RBP29.59■■■□□ 2.33
MEIS3-201ENST00000331559 PCDHB15Q9Y5E8 787 aa29.59■■■□□ 2.33
MEIS3-201ENST00000331559 ADAMTSL3P82987 1691 aa29.59■■■□□ 2.33
MEIS3-201ENST00000331559 RGPD8O14715 1765 aaPredicted RBP29.59■■■□□ 2.33
MEIS3-201ENST00000331559 DLG5Q8TDM6 1919 aa29.59■■■□□ 2.33
MEIS3-201ENST00000331559 RGPD1P0DJD0 1748 aa29.58■■■□□ 2.33
MEIS3-201ENST00000331559 CFAP44Q96MT7 982 aa29.57■■■□□ 2.32
MEIS3-201ENST00000331559 SULT6B1Q6IMI4 303 aa29.56■■■□□ 2.32
MEIS3-201ENST00000331559 SBNO1A3KN83 1393 aa29.56■■■□□ 2.32
MEIS3-201ENST00000331559 THUMPD2Q9BTF0 503 aaKnown RBP29.56■■■□□ 2.32
MEIS3-201ENST00000331559 ARHGEF10O15013 1369 aa29.55■■■□□ 2.32
MEIS3-201ENST00000331559 FLT4P35916 1363 aa29.55■■■□□ 2.32
MEIS3-201ENST00000331559 CHD2O14647 1828 aaKnown RBP29.55■■■□□ 2.32
MEIS3-201ENST00000331559 PIK3C2AO00443 1686 aa29.55■■■□□ 2.32
MEIS3-201ENST00000331559 SLC4A3P48751 1232 aa29.54■■■□□ 2.32
MEIS3-201ENST00000331559 HSP90AB2PQ58FF8 381 aa29.53■■■□□ 2.32
MEIS3-201ENST00000331559 MBIPQ9NS73 344 aa29.53■■■□□ 2.32
MEIS3-201ENST00000331559 USP35Q9P2H5 1018 aa29.53■■■□□ 2.32
MEIS3-201ENST00000331559 MAP3K19Q56UN5 1328 aa29.53■■■□□ 2.32
MEIS3-201ENST00000331559 VAMP4O75379 141 aa29.53■■■□□ 2.32
MEIS3-201ENST00000331559 ITPRIPQ8IWB1 547 aa29.53■■■□□ 2.32
MEIS3-201ENST00000331559 USP54Q70EL1 1684 aa29.52■■■□□ 2.32
MEIS3-201ENST00000331559 AEBP1Q8IUX7 1158 aa29.51■■■□□ 2.32
MEIS3-201ENST00000331559 ARHGAP45Q92619 1136 aa29.5■■■□□ 2.31
MEIS3-201ENST00000331559 KIF24Q5T7B8 1368 aa29.5■■■□□ 2.31
MEIS3-201ENST00000331559 TMEM57Q8N5G2 664 aa29.48■■■□□ 2.31
MEIS3-201ENST00000331559 SETD1BQ9UPS6 1966 aaKnown RBP29.48■■■□□ 2.31
MEIS3-201ENST00000331559 MRPL50Q8N5N7 158 aaKnown RBP29.47■■■□□ 2.31
MEIS3-201ENST00000331559 SOX12O15370 315 aa29.47■■■□□ 2.31
MEIS3-201ENST00000331559 HDAC1Q13547 482 aaPredicted RBP29.47■■■□□ 2.31
MEIS3-201ENST00000331559 VIRMAQ69YN4 1812 aaKnown RBP29.46■■■□□ 2.31
MEIS3-201ENST00000331559 TWISTNBQ3B726 338 aaPredicted RBP29.46■■■□□ 2.31
MEIS3-201ENST00000331559 CHMP4BQ9H444 224 aaKnown RBP29.46■■■□□ 2.31
MEIS3-201ENST00000331559 DAXXQ9UER7 740 aaPredicted RBP29.46■■■□□ 2.31
MEIS3-201ENST00000331559 FAM83GA6ND36 823 aa29.45■■■□□ 2.31
MEIS3-201ENST00000331559 NLRP6P59044 892 aa29.45■■■□□ 2.31
MEIS3-201ENST00000331559 AMPHP49418 695 aa29.45■■■□□ 2.3
MEIS3-201ENST00000331559 HAP1P54257 671 aaPredicted RBP29.44■■■□□ 2.3
MEIS3-201ENST00000331559 TSPYL6Q8N831 410 aa29.44■■■□□ 2.3
MEIS3-201ENST00000331559 KDRP35968 1356 aa29.44■■■□□ 2.3
MEIS3-201ENST00000331559 PDZRN3Q9UPQ7 1066 aa29.44■■■□□ 2.3
MEIS3-201ENST00000331559 ZBTB40Q9NUA8 1239 aa29.43■■■□□ 2.3
MEIS3-201ENST00000331559 ADGRL3Q9HAR2 1447 aa29.42■■■□□ 2.3
MEIS3-201ENST00000331559 DCTN1Q14203 1278 aa29.41■■■□□ 2.3
MEIS3-201ENST00000331559 PHF8Q9UPP1 1060 aa29.41■■■□□ 2.3
MEIS3-201ENST00000331559 IGSF1Q8N6C5 1336 aa29.4■■■□□ 2.3
MEIS3-201ENST00000331559 NPHP4O75161 1426 aaPredicted RBP29.4■■■□□ 2.3
MEIS3-201ENST00000331559 MARF1Q9Y4F3 1742 aaKnown RBP29.4■■■□□ 2.3
MEIS3-201ENST00000331559 USP19O94966 1318 aa29.4■■■□□ 2.3
MEIS3-201ENST00000331559 C8orf58Q8NAV2 365 aa29.39■■■□□ 2.3
MEIS3-201ENST00000331559 CHL1O00533 1208 aa29.38■■■□□ 2.29
MEIS3-201ENST00000331559 KIAA0232Q92628 1395 aa29.37■■■□□ 2.29
MEIS3-201ENST00000331559 SEC24BO95487 1268 aa29.37■■■□□ 2.29
MEIS3-201ENST00000331559 ABTB2Q8N961 1025 aa29.37■■■□□ 2.29
MEIS3-201ENST00000331559 ELL2O00472 640 aaPredicted RBP29.36■■■□□ 2.29
MEIS3-201ENST00000331559 API5Q9BZZ5 524 aaKnown RBP29.36■■■□□ 2.29
MEIS3-201ENST00000331559 RTL1A6NKG5 1358 aa29.35■■■□□ 2.29
MEIS3-201ENST00000331559 ABCC4O15439 1325 aa29.35■■■□□ 2.29
MEIS3-201ENST00000331559 NFKBIBQ15653 356 aa29.35■■■□□ 2.29
MEIS3-201ENST00000331559 GAS2L2Q8NHY3 880 aa29.35■■■□□ 2.29
MEIS3-201ENST00000331559 EYA1Q99502 592 aa29.35■■■□□ 2.29
MEIS3-201ENST00000331559 HOXC9P31274 260 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms