RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PPLO60437 1756 aa20.34■□□□□ 0.85
PDGFB-201ENST00000331163 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
PDGFB-201ENST00000331163 LMTK3Q96Q04 1460 aa20.34■□□□□ 0.85
PDGFB-201ENST00000331163 IL27Q8NEV9 243 aa20.33■□□□□ 0.85
PDGFB-201ENST00000331163 NRXN1Q9ULB1 1477 aa20.33■□□□□ 0.85
PDGFB-201ENST00000331163 QRICH2Q9H0J4 1663 aa20.33■□□□□ 0.85
PDGFB-201ENST00000331163 FCHSD2O94868 740 aa20.33■□□□□ 0.85
PDGFB-201ENST00000331163 ANKRD24Q8TF21 1146 aa20.32■□□□□ 0.84
PDGFB-201ENST00000331163 CEP170BQ9Y4F5 1589 aaPredicted RBP20.32■□□□□ 0.84
PDGFB-201ENST00000331163 C3P01024 1663 aa20.31■□□□□ 0.84
PDGFB-201ENST00000331163 PUS7Q96PZ0 661 aaKnown RBP20.31■□□□□ 0.84
PDGFB-201ENST00000331163 NPHP3Q7Z494 1330 aa20.3■□□□□ 0.84
PDGFB-201ENST00000331163 NINLQ9Y2I6 1382 aa20.3■□□□□ 0.84
PDGFB-201ENST00000331163 TNNQ9UQP3 1299 aa20.3■□□□□ 0.84
PDGFB-201ENST00000331163 HOXC9P31274 260 aa20.29■□□□□ 0.84
PDGFB-201ENST00000331163 SLFN5Q08AF3 891 aa20.29■□□□□ 0.84
PDGFB-201ENST00000331163 EDC4Q6P2E9 1401 aaKnown RBP20.29■□□□□ 0.84
PDGFB-201ENST00000331163 NFE2L2Q16236 605 aa20.29■□□□□ 0.84
PDGFB-201ENST00000331163 DUSP27Q5VZP5 1158 aa20.29■□□□□ 0.84
PDGFB-201ENST00000331163 SIRT1Q96EB6 747 aa20.29■□□□□ 0.84
PDGFB-201ENST00000331163 KCNH5Q8NCM2 988 aa20.28■□□□□ 0.84
PDGFB-201ENST00000331163 IL13P35225 146 aa20.27■□□□□ 0.84
PDGFB-201ENST00000331163 NBPF6Q5VWK0 638 aa20.27■□□□□ 0.84
PDGFB-201ENST00000331163 NBPF4Q96M43 638 aa20.27■□□□□ 0.84
PDGFB-201ENST00000331163 MTHFSDQ2M296 383 aaKnown RBP20.26■□□□□ 0.83
PDGFB-201ENST00000331163 FAM135BQ49AJ0 1406 aa20.26■□□□□ 0.83
PDGFB-201ENST00000331163 MEX3CQ5U5Q3 659 aaKnown RBP20.26■□□□□ 0.83
PDGFB-201ENST00000331163 TTC21AQ8NDW8 1320 aa20.26■□□□□ 0.83
PDGFB-201ENST00000331163 REREQ9P2R6 1566 aa20.25■□□□□ 0.83
PDGFB-201ENST00000331163 AIMP1Q12904 312 aaKnown RBP20.25■□□□□ 0.83
PDGFB-201ENST00000331163 BRINP3Q76B58 766 aa20.25■□□□□ 0.83
PDGFB-201ENST00000331163 NSD2O96028 1365 aa20.24■□□□□ 0.83
PDGFB-201ENST00000331163 ANXA1P04083 346 aa20.24■□□□□ 0.83
PDGFB-201ENST00000331163 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
PDGFB-201ENST00000331163 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
PDGFB-201ENST00000331163 POLR3AO14802 1390 aaPredicted RBP20.24■□□□□ 0.83
PDGFB-201ENST00000331163 USP6P35125 1406 aa20.24■□□□□ 0.83
PDGFB-201ENST00000331163 TSPYL6Q8N831 410 aa20.23■□□□□ 0.83
PDGFB-201ENST00000331163 IPO9Q96P70 1041 aaKnown RBP20.23■□□□□ 0.83
PDGFB-201ENST00000331163 AXIN2Q9Y2T1 843 aa20.23■□□□□ 0.83
PDGFB-201ENST00000331163 IQGAP1P46940 1657 aa20.22■□□□□ 0.83
PDGFB-201ENST00000331163 TWISTNBQ3B726 338 aaPredicted RBP20.22■□□□□ 0.83
PDGFB-201ENST00000331163 PTCD1O75127 700 aaKnown RBP20.22■□□□□ 0.83
PDGFB-201ENST00000331163 PIP4K2AP48426 406 aaPredicted RBP20.22■□□□□ 0.83
PDGFB-201ENST00000331163 C1orf115Q9H7X2 142 aa20.22■□□□□ 0.83
PDGFB-201ENST00000331163 SETBP1Q9Y6X0 1596 aa20.21■□□□□ 0.83
PDGFB-201ENST00000331163 GNAI1P63096 354 aa20.21■□□□□ 0.83
PDGFB-201ENST00000331163 CALD1Q05682 793 aaKnown RBP20.21■□□□□ 0.83
PDGFB-201ENST00000331163 SLC39A6Q13433 755 aa20.2■□□□□ 0.82
PDGFB-201ENST00000331163 C8orf37Q96NL8 207 aa20.2■□□□□ 0.82
PDGFB-201ENST00000331163 STK31Q9BXU1 1019 aa20.2■□□□□ 0.82
PDGFB-201ENST00000331163 TATP17735 454 aaPredicted RBP20.19■□□□□ 0.82
PDGFB-201ENST00000331163 ERICH6BQ5W0A0 696 aa20.19■□□□□ 0.82
PDGFB-201ENST00000331163 NGLY1Q96IV0 654 aa20.19■□□□□ 0.82
PDGFB-201ENST00000331163 NOB1Q9ULX3 412 aaKnown RBP20.19■□□□□ 0.82
PDGFB-201ENST00000331163 EIF5BO60841 1220 aaKnown RBP20.19■□□□□ 0.82
PDGFB-201ENST00000331163 SSH1Q8WYL5 1049 aa20.19■□□□□ 0.82
PDGFB-201ENST00000331163 CPS1P31327 1500 aa20.18■□□□□ 0.82
PDGFB-201ENST00000331163 BTG4Q9NY30 223 aa20.18■□□□□ 0.82
PDGFB-201ENST00000331163 PLEKHO1Q53GL0 409 aaPredicted RBP20.18■□□□□ 0.82
PDGFB-201ENST00000331163 GAS2L2Q8NHY3 880 aa20.18■□□□□ 0.82
PDGFB-201ENST00000331163 MBIPQ9NS73 344 aa20.18■□□□□ 0.82
PDGFB-201ENST00000331163 TRIM35Q9UPQ4 493 aa20.18■□□□□ 0.82
PDGFB-201ENST00000331163 FLT4P35916 1363 aa20.17■□□□□ 0.82
PDGFB-201ENST00000331163 ATP7BP35670 1465 aa20.17■□□□□ 0.82
PDGFB-201ENST00000331163 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
PDGFB-201ENST00000331163 UBR1Q8IWV7 1749 aa20.17■□□□□ 0.82
PDGFB-201ENST00000331163 TOM1O60784 492 aa20.17■□□□□ 0.82
PDGFB-201ENST00000331163 FKBP5Q13451 457 aaPredicted RBP20.17■□□□□ 0.82
PDGFB-201ENST00000331163 NPC1L1Q9UHC9 1359 aa20.17■□□□□ 0.82
PDGFB-201ENST00000331163 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
PDGFB-201ENST00000331163 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
PDGFB-201ENST00000331163 C8orf58Q8NAV2 365 aa20.16■□□□□ 0.82
PDGFB-201ENST00000331163 ZKSCAN2Q63HK3 967 aa20.15■□□□□ 0.82
PDGFB-201ENST00000331163 IP6K1Q92551 441 aa20.15■□□□□ 0.82
PDGFB-201ENST00000331163 SMG6Q86US8 1419 aaKnown RBP20.15■□□□□ 0.82
PDGFB-201ENST00000331163 MYL6BP14649 208 aa20.14■□□□□ 0.81
PDGFB-201ENST00000331163 WDR63Q8IWG1 891 aa20.14■□□□□ 0.81
PDGFB-201ENST00000331163 F6X3S4 739 aa20.13■□□□□ 0.81
PDGFB-201ENST00000331163 TTC5Q8N0Z6 440 aa20.13■□□□□ 0.81
PDGFB-201ENST00000331163 RBM42Q9BTD8 480 aaKnown RBP20.13■□□□□ 0.81
PDGFB-201ENST00000331163 ARHGEF28Q8N1W1 1705 aaKnown RBP20.13■□□□□ 0.81
PDGFB-201ENST00000331163 KIAA0232Q92628 1395 aa20.13■□□□□ 0.81
PDGFB-201ENST00000331163 ADGRL3Q9HAR2 1447 aa20.13■□□□□ 0.81
PDGFB-201ENST00000331163 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
PDGFB-201ENST00000331163 BTBD11A6QL63 1104 aa20.12■□□□□ 0.81
PDGFB-201ENST00000331163 DZIP1LQ8IYY4 767 aaKnown RBP20.12■□□□□ 0.81
PDGFB-201ENST00000331163 MYO3AQ8NEV4 1616 aa20.12■□□□□ 0.81
PDGFB-201ENST00000331163 IPO8O15397 1037 aaKnown RBP20.11■□□□□ 0.81
PDGFB-201ENST00000331163 PIK3R4Q99570 1358 aa20.11■□□□□ 0.81
PDGFB-201ENST00000331163 FAM182BQ5T319 152 aa20.11■□□□□ 0.81
PDGFB-201ENST00000331163 LARP1Q6PKG0 1096 aaKnown RBP20.1■□□□□ 0.81
PDGFB-201ENST00000331163 NKTRP30414 1462 aaKnown RBP20.1■□□□□ 0.81
PDGFB-201ENST00000331163 ARHGAP23Q9P227 1491 aa20.1■□□□□ 0.81
PDGFB-201ENST00000331163 CD163L1Q9NR16 1453 aa20.09■□□□□ 0.81
PDGFB-201ENST00000331163 HDGFL1Q5TGJ6 251 aa20.09■□□□□ 0.81
PDGFB-201ENST00000331163 PLEKHF1Q96S99 279 aa20.09■□□□□ 0.81
PDGFB-201ENST00000331163 ACSBG1Q96GR2 724 aa20.09■□□□□ 0.81
PDGFB-201ENST00000331163 CPSF1Q10570 1443 aaKnown RBP20.08■□□□□ 0.81
PDGFB-201ENST00000331163 CABP4P57796 275 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms