RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 C14orf37Q86TY3 774 aa20.51■□□□□ 0.87
PGBD2-201ENST00000329291 COG6Q9Y2V7 657 aa20.51■□□□□ 0.87
PGBD2-201ENST00000329291 PEAK1Q9H792 1746 aa20.5■□□□□ 0.87
PGBD2-201ENST00000329291 MAP3K19Q56UN5 1328 aa20.49■□□□□ 0.87
PGBD2-201ENST00000329291 NEFMP07197 916 aa20.49■□□□□ 0.87
PGBD2-201ENST00000329291 NUTM2GQ5VZR2 741 aa20.49■□□□□ 0.87
PGBD2-201ENST00000329291 PHF8Q9UPP1 1060 aa20.48■□□□□ 0.87
PGBD2-201ENST00000329291 SULT6B1Q6IMI4 303 aa20.48■□□□□ 0.87
PGBD2-201ENST00000329291 PROSER2Q86WR7 435 aaPredicted RBP20.47■□□□□ 0.87
PGBD2-201ENST00000329291 LAS1LQ9Y4W2 734 aaKnown RBP20.47■□□□□ 0.87
PGBD2-201ENST00000329291 NLRP6P59044 892 aa20.47■□□□□ 0.87
PGBD2-201ENST00000329291 SSH1Q8WYL5 1049 aa20.47■□□□□ 0.87
PGBD2-201ENST00000329291 FAM83GA6ND36 823 aa20.46■□□□□ 0.87
PGBD2-201ENST00000329291 CT47B1P0C2W7 299 aaPredicted RBP20.46■□□□□ 0.87
PGBD2-201ENST00000329291 CLUAP1Q96AJ1 413 aa20.46■□□□□ 0.87
PGBD2-201ENST00000329291 CENPQQ7L2Z9 268 aaPredicted RBP20.45■□□□□ 0.86
PGBD2-201ENST00000329291 PIK3C2AO00443 1686 aa20.45■□□□□ 0.86
PGBD2-201ENST00000329291 TCERG1O14776 1098 aaKnown RBP20.44■□□□□ 0.86
PGBD2-201ENST00000329291 IGHDP01880 384 aa20.44■□□□□ 0.86
PGBD2-201ENST00000329291 DCTN1Q14203 1278 aa20.44■□□□□ 0.86
PGBD2-201ENST00000329291 ESCO1Q5FWF5 840 aa20.44■□□□□ 0.86
PGBD2-201ENST00000329291 PAK3O75914 559 aaPredicted RBP20.43■□□□□ 0.86
PGBD2-201ENST00000329291 SMC4Q9NTJ3 1288 aa20.43■□□□□ 0.86
PGBD2-201ENST00000329291 ZNF853P0CG23 659 aa20.42■□□□□ 0.86
PGBD2-201ENST00000329291 ABTB2Q8N961 1025 aa20.42■□□□□ 0.86
PGBD2-201ENST00000329291 KDM4FA0A1W2PPD8 638 aa20.41■□□□□ 0.86
PGBD2-201ENST00000329291 HSPA2P54652 639 aa20.41■□□□□ 0.86
PGBD2-201ENST00000329291 SBNO1A3KN83 1393 aa20.4■□□□□ 0.86
PGBD2-201ENST00000329291 ZKSCAN2Q63HK3 967 aa20.4■□□□□ 0.86
PGBD2-201ENST00000329291 MSH5O43196 834 aa20.39■□□□□ 0.86
PGBD2-201ENST00000329291 TSPYL6Q8N831 410 aa20.39■□□□□ 0.86
PGBD2-201ENST00000329291 MBIPQ9NS73 344 aa20.39■□□□□ 0.86
PGBD2-201ENST00000329291 NOB1Q9ULX3 412 aaKnown RBP20.39■□□□□ 0.86
PGBD2-201ENST00000329291 AMPHP49418 695 aa20.39■□□□□ 0.85
PGBD2-201ENST00000329291 C19orf44Q9H6X5 657 aa20.39■□□□□ 0.85
PGBD2-201ENST00000329291 IFT57Q9NWB7 429 aa20.39■□□□□ 0.85
PGBD2-201ENST00000329291 FLT4P35916 1363 aa20.39■□□□□ 0.85
PGBD2-201ENST00000329291 PSME1Q06323 249 aa20.38■□□□□ 0.85
PGBD2-201ENST00000329291 TRIM27P14373 513 aa20.38■□□□□ 0.85
PGBD2-201ENST00000329291 GNAI1P63096 354 aa20.38■□□□□ 0.85
PGBD2-201ENST00000329291 USP54Q70EL1 1684 aa20.37■□□□□ 0.85
PGBD2-201ENST00000329291 RGPD1P0DJD0 1748 aa20.37■□□□□ 0.85
PGBD2-201ENST00000329291 DLG5Q8TDM6 1919 aa20.37■□□□□ 0.85
PGBD2-201ENST00000329291 ORAI2Q96SN7 254 aa20.37■□□□□ 0.85
PGBD2-201ENST00000329291 EYA1Q99502 592 aa20.37■□□□□ 0.85
PGBD2-201ENST00000329291 PCDHB15Q9Y5E8 787 aa20.37■□□□□ 0.85
PGBD2-201ENST00000329291 MARF1Q9Y4F3 1742 aaKnown RBP20.36■□□□□ 0.85
PGBD2-201ENST00000329291 VAMP4O75379 141 aa20.36■□□□□ 0.85
PGBD2-201ENST00000329291 MS4A1P11836 297 aa20.36■□□□□ 0.85
PGBD2-201ENST00000329291 PDE4AP27815 886 aa20.36■□□□□ 0.85
PGBD2-201ENST00000329291 CALD1Q05682 793 aaKnown RBP20.36■□□□□ 0.85
PGBD2-201ENST00000329291 DZIP1LQ8IYY4 767 aaKnown RBP20.36■□□□□ 0.85
PGBD2-201ENST00000329291 ELL2O00472 640 aaPredicted RBP20.36■□□□□ 0.85
PGBD2-201ENST00000329291 CFAP44Q96MT7 982 aa20.36■□□□□ 0.85
PGBD2-201ENST00000329291 HOXC9P31274 260 aa20.35■□□□□ 0.85
PGBD2-201ENST00000329291 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
PGBD2-201ENST00000329291 MVPQ14764 893 aaKnown RBP20.35■□□□□ 0.85
PGBD2-201ENST00000329291 NCOA3Q9Y6Q9 1424 aa20.35■□□□□ 0.85
PGBD2-201ENST00000329291 FOXO3O43524 673 aa20.35■□□□□ 0.85
PGBD2-201ENST00000329291 MCM10Q7L590 875 aa20.35■□□□□ 0.85
PGBD2-201ENST00000329291 LMTK3Q96Q04 1460 aa20.34■□□□□ 0.85
PGBD2-201ENST00000329291 ATF7IPQ6VMQ6 1270 aa20.34■□□□□ 0.85
PGBD2-201ENST00000329291 C8orf58Q8NAV2 365 aa20.34■□□□□ 0.85
PGBD2-201ENST00000329291 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
PGBD2-201ENST00000329291 TMEM94Q12767 1356 aa20.34■□□□□ 0.85
PGBD2-201ENST00000329291 FTSJ3Q8IY81 847 aaKnown RBP20.33■□□□□ 0.85
PGBD2-201ENST00000329291 KIF24Q5T7B8 1368 aa20.33■□□□□ 0.84
PGBD2-201ENST00000329291 ALDH1L2Q3SY69 923 aa20.33■□□□□ 0.84
PGBD2-201ENST00000329291 BACH2Q9BYV9 841 aa20.33■□□□□ 0.84
PGBD2-201ENST00000329291 IGSF1Q8N6C5 1336 aa20.32■□□□□ 0.84
PGBD2-201ENST00000329291 ATF3P18847 181 aa20.32■□□□□ 0.84
PGBD2-201ENST00000329291 XPCQ01831 940 aaPredicted RBP20.32■□□□□ 0.84
PGBD2-201ENST00000329291 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
PGBD2-201ENST00000329291 C1orf167Q5SNV9 1468 aa20.32■□□□□ 0.84
PGBD2-201ENST00000329291 STRCP1A6NGW2 1772 aa20.31■□□□□ 0.84
PGBD2-201ENST00000329291 DCCP43146 1447 aa20.31■□□□□ 0.84
PGBD2-201ENST00000329291 KDRP35968 1356 aa20.31■□□□□ 0.84
PGBD2-201ENST00000329291 KIF1AQ12756 1690 aa20.31■□□□□ 0.84
PGBD2-201ENST00000329291 MRPL50Q8N5N7 158 aaKnown RBP20.3■□□□□ 0.84
PGBD2-201ENST00000329291 LTV1Q96GA3 475 aaPredicted RBP20.3■□□□□ 0.84
PGBD2-201ENST00000329291 AAMPQ13685 434 aa20.29■□□□□ 0.84
PGBD2-201ENST00000329291 TMEM57Q8N5G2 664 aa20.29■□□□□ 0.84
PGBD2-201ENST00000329291 RGS3P49796 1198 aa20.29■□□□□ 0.84
PGBD2-201ENST00000329291 TWISTNBQ3B726 338 aaPredicted RBP20.29■□□□□ 0.84
PGBD2-201ENST00000329291 BRPF1P55201 1214 aaPredicted RBP20.28■□□□□ 0.84
PGBD2-201ENST00000329291 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
PGBD2-201ENST00000329291 CHL1O00533 1208 aa20.27■□□□□ 0.84
PGBD2-201ENST00000329291 ITPRIPQ8IWB1 547 aa20.27■□□□□ 0.84
PGBD2-201ENST00000329291 ZNF428Q96B54 188 aa20.27■□□□□ 0.84
PGBD2-201ENST00000329291 KIF16BQ96L93 1317 aa20.27■□□□□ 0.84
PGBD2-201ENST00000329291 KCNH5Q8NCM2 988 aa20.27■□□□□ 0.84
PGBD2-201ENST00000329291 RTL1A6NKG5 1358 aa20.26■□□□□ 0.83
PGBD2-201ENST00000329291 IPO8O15397 1037 aaKnown RBP20.26■□□□□ 0.83
PGBD2-201ENST00000329291 PLEKHG5O94827 1062 aa20.26■□□□□ 0.83
PGBD2-201ENST00000329291 CADPS2Q86UW7 1296 aa20.26■□□□□ 0.83
PGBD2-201ENST00000329291 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
PGBD2-201ENST00000329291 CRB1P82279 1406 aa20.26■□□□□ 0.83
PGBD2-201ENST00000329291 MST1RQ04912 1400 aa20.26■□□□□ 0.83
PGBD2-201ENST00000329291 STRCQ7RTU9 1775 aa20.25■□□□□ 0.83
PGBD2-201ENST00000329291 KRT28Q7Z3Y7 464 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms