RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 PIP4K2AP48426 406 aaPredicted RBP19.73■□□□□ 0.75
SYNM-201ENST00000328642 CCDC85AQ96PX6 553 aaPredicted RBP19.73■□□□□ 0.75
SYNM-201ENST00000328642 SEC24BO95487 1268 aa19.73■□□□□ 0.75
SYNM-201ENST00000328642 TOM1L2Q6ZVM7 507 aa19.73■□□□□ 0.75
SYNM-201ENST00000328642 TSPOAP1O95153 1857 aa19.73■□□□□ 0.75
SYNM-201ENST00000328642 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
SYNM-201ENST00000328642 DDX17Q92841 729 aaKnown RBP19.72■□□□□ 0.75
SYNM-201ENST00000328642 PRDM11Q9NQV5 511 aa19.72■□□□□ 0.75
SYNM-201ENST00000328642 CFAP44Q96MT7 982 aa19.72■□□□□ 0.75
SYNM-201ENST00000328642 TRIM35Q9UPQ4 493 aa19.71■□□□□ 0.75
SYNM-201ENST00000328642 PRDM15P57071 1507 aaPredicted RBP19.71■□□□□ 0.75
SYNM-201ENST00000328642 PTMAP06454 111 aaKnown RBP19.71■□□□□ 0.75
SYNM-201ENST00000328642 IFIT2P09913 472 aaKnown RBP19.71■□□□□ 0.75
SYNM-201ENST00000328642 IFT57Q9NWB7 429 aa19.71■□□□□ 0.75
SYNM-201ENST00000328642 GNAI2P04899 355 aa19.7■□□□□ 0.74
SYNM-201ENST00000328642 CDC42BPBQ9Y5S2 1711 aa19.7■□□□□ 0.74
SYNM-201ENST00000328642 MTHFSDQ2M296 383 aaKnown RBP19.69■□□□□ 0.74
SYNM-201ENST00000328642 NEUROD6Q96NK8 337 aa19.69■□□□□ 0.74
SYNM-201ENST00000328642 GBP4Q96PP9 640 aa19.69■□□□□ 0.74
SYNM-201ENST00000328642 MAP3K19Q56UN5 1328 aa19.69■□□□□ 0.74
SYNM-201ENST00000328642 ORAI2Q96SN7 254 aa19.69■□□□□ 0.74
SYNM-201ENST00000328642 DIAPH3Q9NSV4 1193 aa19.69■□□□□ 0.74
SYNM-201ENST00000328642 EIF2AK4Q9P2K8 1649 aaKnown RBP19.69■□□□□ 0.74
SYNM-201ENST00000328642 ST18O60284 1047 aa19.68■□□□□ 0.74
SYNM-201ENST00000328642 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.68■□□□□ 0.74
SYNM-201ENST00000328642 SRGAP3O43295 1099 aa19.68■□□□□ 0.74
SYNM-201ENST00000328642 GSE1Q14687 1217 aa19.68■□□□□ 0.74
SYNM-201ENST00000328642 NUTM1Q86Y26 1132 aa19.68■□□□□ 0.74
SYNM-201ENST00000328642 MEIS3Q99687 375 aa19.68■□□□□ 0.74
SYNM-201ENST00000328642 RBM42Q9BTD8 480 aaKnown RBP19.68■□□□□ 0.74
SYNM-201ENST00000328642 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
SYNM-201ENST00000328642 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
SYNM-201ENST00000328642 PIK3C2GO75747 1445 aa19.68■□□□□ 0.74
SYNM-201ENST00000328642 NUTM2BA6NNL0 878 aaPredicted RBP19.68■□□□□ 0.74
SYNM-201ENST00000328642 NUTM2EB1AL46 878 aaPredicted RBP19.68■□□□□ 0.74
SYNM-201ENST00000328642 NUTM2AQ8IVF1 878 aaPredicted RBP19.68■□□□□ 0.74
SYNM-201ENST00000328642 EYA1Q99502 592 aa19.68■□□□□ 0.74
SYNM-201ENST00000328642 RSPH6AQ9H0K4 717 aa19.68■□□□□ 0.74
SYNM-201ENST00000328642 G3BP1Q13283 466 aaKnown RBP eCLIP19.67■□□□□ 0.74
SYNM-201ENST00000328642 METP08581 1390 aa19.67■□□□□ 0.74
SYNM-201ENST00000328642 ERVK-7P63135 1459 aa19.67■□□□□ 0.74
SYNM-201ENST00000328642 CT47B1P0C2W7 299 aaPredicted RBP19.67■□□□□ 0.74
SYNM-201ENST00000328642 KDM5DQ9BY66 1539 aa19.67■□□□□ 0.74
SYNM-201ENST00000328642 CDC45O75419 566 aa19.66■□□□□ 0.74
SYNM-201ENST00000328642 TAF7Q15545 349 aaPredicted RBP19.66■□□□□ 0.74
SYNM-201ENST00000328642 VAMP4O75379 141 aa19.66■□□□□ 0.74
SYNM-201ENST00000328642 GNAI3P08754 354 aa19.66■□□□□ 0.74
SYNM-201ENST00000328642 TATP17735 454 aaPredicted RBP19.66■□□□□ 0.74
SYNM-201ENST00000328642 KRT28Q7Z3Y7 464 aa19.66■□□□□ 0.74
SYNM-201ENST00000328642 SRCIN1Q9C0H9 1055 aa19.66■□□□□ 0.74
SYNM-201ENST00000328642 SLC39A6Q13433 755 aa19.66■□□□□ 0.74
SYNM-201ENST00000328642 GPATCH3Q96I76 525 aa19.65■□□□□ 0.74
SYNM-201ENST00000328642 DDX58O95786 925 aaKnown RBP19.65■□□□□ 0.74
SYNM-201ENST00000328642 GTF2E1P29083 439 aaPredicted RBP19.65■□□□□ 0.74
SYNM-201ENST00000328642 GCC1Q96CN9 775 aa19.64■□□□□ 0.74
SYNM-201ENST00000328642 DDX49Q9Y6V7 483 aaKnown RBP19.64■□□□□ 0.74
SYNM-201ENST00000328642 GOLGA6L4A6NEF3 574 aa19.64■□□□□ 0.73
SYNM-201ENST00000328642 NEK4P51957 841 aa19.64■□□□□ 0.73
SYNM-201ENST00000328642 INTS3Q68E01 1043 aaKnown RBP19.64■□□□□ 0.73
SYNM-201ENST00000328642 CHMP4AQ9BY43 222 aa19.64■□□□□ 0.73
SYNM-201ENST00000328642 HSP90B1P14625 803 aaKnown RBP19.63■□□□□ 0.73
SYNM-201ENST00000328642 FOSBP53539 338 aa19.63■□□□□ 0.73
SYNM-201ENST00000328642 NSD2O96028 1365 aa19.63■□□□□ 0.73
SYNM-201ENST00000328642 REC8O95072 547 aa19.63■□□□□ 0.73
SYNM-201ENST00000328642 LRRFIP2Q9Y608 721 aaKnown RBP19.63■□□□□ 0.73
SYNM-201ENST00000328642 G2E3Q7L622 706 aa19.62■□□□□ 0.73
SYNM-201ENST00000328642 ZFYVE16Q7Z3T8 1539 aa19.62■□□□□ 0.73
SYNM-201ENST00000328642 FLIIQ13045 1269 aa19.62■□□□□ 0.73
SYNM-201ENST00000328642 CABP4P57796 275 aa19.61■□□□□ 0.73
SYNM-201ENST00000328642 IL13P35225 146 aa19.61■□□□□ 0.73
SYNM-201ENST00000328642 ALDH1L2Q3SY69 923 aa19.61■□□□□ 0.73
SYNM-201ENST00000328642 C8orf34Q49A92 452 aa19.61■□□□□ 0.73
SYNM-201ENST00000328642 LARP6Q9BRS8 491 aaKnown RBP19.61■□□□□ 0.73
SYNM-201ENST00000328642 TOMM22Q9NS69 142 aa19.61■□□□□ 0.73
SYNM-201ENST00000328642 PIP4K2BP78356 416 aa19.6■□□□□ 0.73
SYNM-201ENST00000328642 AAMPQ13685 434 aa19.6■□□□□ 0.73
SYNM-201ENST00000328642 CHMP5Q9NZZ3 219 aa19.6■□□□□ 0.73
SYNM-201ENST00000328642 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.6■□□□□ 0.73
SYNM-201ENST00000328642 RNF123Q5XPI4 1314 aa19.6■□□□□ 0.73
SYNM-201ENST00000328642 CLASRPQ8N2M8 674 aaKnown RBP19.6■□□□□ 0.73
SYNM-201ENST00000328642 PI4KAP2A4QPH2 592 aa19.59■□□□□ 0.73
SYNM-201ENST00000328642 GOLGA6L3A6NEY3 463 aa19.59■□□□□ 0.73
SYNM-201ENST00000328642 PI4KAP1Q8N8J0 262 aa19.59■□□□□ 0.73
SYNM-201ENST00000328642 ABCC11Q96J66 1382 aa19.59■□□□□ 0.73
SYNM-201ENST00000328642 CCT4P50991 539 aaKnown RBP19.59■□□□□ 0.73
SYNM-201ENST00000328642 LRRCC1Q9C099 1032 aa19.59■□□□□ 0.73
SYNM-201ENST00000328642 MRPL50Q8N5N7 158 aaKnown RBP19.58■□□□□ 0.73
SYNM-201ENST00000328642 ANKRD24Q8TF21 1146 aa19.58■□□□□ 0.73
SYNM-201ENST00000328642 DNAJC2Q99543 621 aaKnown RBP19.58■□□□□ 0.73
SYNM-201ENST00000328642 UPF3BQ9BZI7 483 aaKnown RBP19.58■□□□□ 0.73
SYNM-201ENST00000328642 KDM4AO75164 1064 aa19.58■□□□□ 0.72
SYNM-201ENST00000328642 CCDC27Q2M243 656 aa19.57■□□□□ 0.72
SYNM-201ENST00000328642 MCTP1Q6DN14 999 aa19.57■□□□□ 0.72
SYNM-201ENST00000328642 NAP1L5Q96NT1 182 aaPredicted RBP19.57■□□□□ 0.72
SYNM-201ENST00000328642 BRPF3Q9ULD4 1205 aa19.56■□□□□ 0.72
SYNM-201ENST00000328642 HDAC5Q9UQL6 1122 aa19.56■□□□□ 0.72
SYNM-201ENST00000328642 KCNH5Q8NCM2 988 aa19.56■□□□□ 0.72
SYNM-201ENST00000328642 ATP5J2-PTCD1G3V325 749 aa19.56■□□□□ 0.72
SYNM-201ENST00000328642 ADAMTS2O95450 1211 aa19.56■□□□□ 0.72
SYNM-201ENST00000328642 DNTTIP2Q5QJE6 756 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms