RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL4A5-201ENST00000328300 BTBD11A6QL63 1104 aa13.79□□□□□ -0.2
COL4A5-201ENST00000328300 SART3Q15020 963 aaKnown RBP13.79□□□□□ -0.2
COL4A5-201ENST00000328300 NOL8Q76FK4 1167 aaKnown RBP13.79□□□□□ -0.2
COL4A5-201ENST00000328300 GZF1Q9H116 711 aaPredicted RBP13.79□□□□□ -0.2
COL4A5-201ENST00000328300 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.79□□□□□ -0.2
COL4A5-201ENST00000328300 UHRF1BP1Q6BDS2 1440 aa13.79□□□□□ -0.2
COL4A5-201ENST00000328300 PDIA4P13667 645 aaKnown RBP13.79□□□□□ -0.2
COL4A5-201ENST00000328300 XBP1P17861 261 aa13.79□□□□□ -0.2
COL4A5-201ENST00000328300 WAPLQ7Z5K2 1190 aa13.78□□□□□ -0.2
COL4A5-201ENST00000328300 FSD1Q9BTV5 496 aa13.78□□□□□ -0.2
COL4A5-201ENST00000328300 PTPRKQ15262 1439 aa13.78□□□□□ -0.2
COL4A5-201ENST00000328300 SMC3Q9UQE7 1217 aa13.78□□□□□ -0.2
COL4A5-201ENST00000328300 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
COL4A5-201ENST00000328300 STARD3NLO95772 234 aa13.78□□□□□ -0.2
COL4A5-201ENST00000328300 ATP10AO60312 1499 aa13.78□□□□□ -0.2
COL4A5-201ENST00000328300 CDCA7LQ96GN5 454 aa13.78□□□□□ -0.2
COL4A5-201ENST00000328300 RABEP1Q15276 862 aa13.78□□□□□ -0.2
COL4A5-201ENST00000328300 LRRCC1Q9C099 1032 aa13.78□□□□□ -0.2
COL4A5-201ENST00000328300 BRMS1Q9HCU9 246 aa13.77□□□□□ -0.2
COL4A5-201ENST00000328300 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
COL4A5-201ENST00000328300 NFXL1Q6ZNB6 911 aa13.77□□□□□ -0.21
COL4A5-201ENST00000328300 ATP7AQ04656 1500 aa13.77□□□□□ -0.21
COL4A5-201ENST00000328300 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.21
COL4A5-201ENST00000328300 NKTRP30414 1462 aaKnown RBP13.77□□□□□ -0.21
COL4A5-201ENST00000328300 RRS1Q15050 365 aaKnown RBP13.77□□□□□ -0.21
COL4A5-201ENST00000328300 IL27Q8NEV9 243 aa13.77□□□□□ -0.21
COL4A5-201ENST00000328300 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
COL4A5-201ENST00000328300 TEX13AQ9BXU3 409 aaPredicted RBP13.76□□□□□ -0.21
COL4A5-201ENST00000328300 TAF7Q15545 349 aaPredicted RBP13.76□□□□□ -0.21
COL4A5-201ENST00000328300 WASHC4Q2M389 1173 aa13.76□□□□□ -0.21
COL4A5-201ENST00000328300 MSH6P52701 1360 aa13.76□□□□□ -0.21
COL4A5-201ENST00000328300 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
COL4A5-201ENST00000328300 DDX49Q9Y6V7 483 aaKnown RBP13.76□□□□□ -0.21
COL4A5-201ENST00000328300 ARHGEF5Q12774 1597 aa13.76□□□□□ -0.21
COL4A5-201ENST00000328300 TPM3P06753 285 aa13.76□□□□□ -0.21
COL4A5-201ENST00000328300 TPM1P09493 284 aa13.76□□□□□ -0.21
COL4A5-201ENST00000328300 HSP90AB3PQ58FF7 597 aa13.76□□□□□ -0.21
COL4A5-201ENST00000328300 PDCP20941 246 aa13.75□□□□□ -0.21
COL4A5-201ENST00000328300 TSR2Q969E8 191 aaKnown RBP13.75□□□□□ -0.21
COL4A5-201ENST00000328300 MAPKBP1O60336 1514 aa13.75□□□□□ -0.21
COL4A5-201ENST00000328300 TRPM2O94759 1503 aa13.75□□□□□ -0.21
COL4A5-201ENST00000328300 ZNF652Q9Y2D9 606 aa13.75□□□□□ -0.21
COL4A5-201ENST00000328300 ANKRD20A12PQ8NF67 263 aa13.75□□□□□ -0.21
COL4A5-201ENST00000328300 RAB11FIP3O75154 756 aa13.74□□□□□ -0.21
COL4A5-201ENST00000328300 ANKRD1Q15327 319 aa13.74□□□□□ -0.21
COL4A5-201ENST00000328300 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
COL4A5-201ENST00000328300 GOLGA6L19H0YKK7 550 aa13.74□□□□□ -0.21
COL4A5-201ENST00000328300 ARID3AQ99856 593 aa13.74□□□□□ -0.21
COL4A5-201ENST00000328300 TTC39AQ5SRH9 613 aa13.74□□□□□ -0.21
COL4A5-201ENST00000328300 LARP1Q6PKG0 1096 aaKnown RBP13.74□□□□□ -0.21
COL4A5-201ENST00000328300 ZFYVE9O95405 1425 aa13.74□□□□□ -0.21
COL4A5-201ENST00000328300 CNNM1Q9NRU3 951 aa13.73□□□□□ -0.21
COL4A5-201ENST00000328300 PTPRCP08575 1304 aa13.73□□□□□ -0.21
COL4A5-201ENST00000328300 TPD52L1Q16890 204 aaPredicted RBP13.73□□□□□ -0.21
COL4A5-201ENST00000328300 TSR1Q2NL82 804 aaKnown RBP13.73□□□□□ -0.21
COL4A5-201ENST00000328300 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
COL4A5-201ENST00000328300 NME9Q86XW9 330 aa13.73□□□□□ -0.21
COL4A5-201ENST00000328300 TCEAL9Q9UHQ7 104 aa13.73□□□□□ -0.21
COL4A5-201ENST00000328300 CCDC57Q2TAC2 916 aa13.72□□□□□ -0.21
COL4A5-201ENST00000328300 VPS53Q5VIR6 699 aa13.72□□□□□ -0.21
COL4A5-201ENST00000328300 MCTP1Q6DN14 999 aa13.72□□□□□ -0.21
COL4A5-201ENST00000328300 DDX54Q8TDD1 881 aaKnown RBP13.72□□□□□ -0.21
COL4A5-201ENST00000328300 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
COL4A5-201ENST00000328300 BECN2A8MW95 431 aa13.72□□□□□ -0.21
COL4A5-201ENST00000328300 TMOD3Q9NYL9 352 aa13.72□□□□□ -0.21
COL4A5-201ENST00000328300 KRT28Q7Z3Y7 464 aa13.71□□□□□ -0.21
COL4A5-201ENST00000328300 DISP3Q9P2K9 1392 aa13.71□□□□□ -0.21
COL4A5-201ENST00000328300 NPHP3Q7Z494 1330 aa13.71□□□□□ -0.21
COL4A5-201ENST00000328300 HYPKQ9NX55 129 aa13.71□□□□□ -0.21
COL4A5-201ENST00000328300 LETM1O95202 739 aaPredicted RBP13.7□□□□□ -0.22
COL4A5-201ENST00000328300 CTNNA3Q9UI47 895 aa13.7□□□□□ -0.22
COL4A5-201ENST00000328300 DUSP27Q5VZP5 1158 aa13.7□□□□□ -0.22
COL4A5-201ENST00000328300 AKAP2Q9Y2D5 859 aa13.7□□□□□ -0.22
COL4A5-201ENST00000328300 ACEP12821 1306 aa13.7□□□□□ -0.22
COL4A5-201ENST00000328300 CCDC73Q6ZRK6 1079 aa13.7□□□□□ -0.22
COL4A5-201ENST00000328300 CWC22Q9HCG8 908 aaKnown RBP13.7□□□□□ -0.22
COL4A5-201ENST00000328300 FBXW7Q969H0 707 aa13.69□□□□□ -0.22
COL4A5-201ENST00000328300 BCAR3O75815 825 aa13.69□□□□□ -0.22
COL4A5-201ENST00000328300 KRT32Q14532 448 aa13.69□□□□□ -0.22
COL4A5-201ENST00000328300 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
COL4A5-201ENST00000328300 CCDC27Q2M243 656 aa13.69□□□□□ -0.22
COL4A5-201ENST00000328300 CHD1LQ86WJ1 897 aa13.69□□□□□ -0.22
COL4A5-201ENST00000328300 CEP126Q9P2H0 1117 aa13.69□□□□□ -0.22
COL4A5-201ENST00000328300 TBX22Q9Y458 520 aa13.69□□□□□ -0.22
COL4A5-201ENST00000328300 POLR3AO14802 1390 aaPredicted RBP13.69□□□□□ -0.22
COL4A5-201ENST00000328300 PPIP5K1Q6PFW1 1433 aa13.69□□□□□ -0.22
COL4A5-201ENST00000328300 CEBPAP49715 358 aaPredicted RBP13.69□□□□□ -0.22
COL4A5-201ENST00000328300 ZC3H6P61129 1189 aaKnown RBP13.69□□□□□ -0.22
COL4A5-201ENST00000328300 MPHOSPH8Q99549 860 aa13.69□□□□□ -0.22
COL4A5-201ENST00000328300 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
COL4A5-201ENST00000328300 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
COL4A5-201ENST00000328300 ADGBQ8N7X0 1667 aa13.68□□□□□ -0.22
COL4A5-201ENST00000328300 SOS1Q07889 1333 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-201ENST00000328300 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
COL4A5-201ENST00000328300 NUTM2BA6NNL0 878 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-201ENST00000328300 NUTM2EB1AL46 878 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-201ENST00000328300 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-201ENST00000328300 FMNL2Q96PY5 1086 aa13.68□□□□□ -0.22
COL4A5-201ENST00000328300 ZMYM3Q14202 1370 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms