RNA–Protein interactions for RNA: ENST00000317620.13

PROM2-201, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-201ENST00000317620 CCDC47Q96A33 483 aaKnown RBP16.26■□□□□ 0.19
PROM2-201ENST00000317620 CCDC158Q5M9N0 1113 aa16.26■□□□□ 0.19
PROM2-201ENST00000317620 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
PROM2-201ENST00000317620 CEP89Q96ST8 783 aa16.26■□□□□ 0.19
PROM2-201ENST00000317620 SDF4Q9BRK5 362 aa16.26■□□□□ 0.19
PROM2-201ENST00000317620 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
PROM2-201ENST00000317620 TPM2P07951 284 aa16.26■□□□□ 0.19
PROM2-201ENST00000317620 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
PROM2-201ENST00000317620 MAP4K4O95819 1239 aaPredicted RBP16.26■□□□□ 0.19
PROM2-201ENST00000317620 NUTM2BA6NNL0 878 aaPredicted RBP16.25■□□□□ 0.19
PROM2-201ENST00000317620 NUTM2EB1AL46 878 aaPredicted RBP16.25■□□□□ 0.19
PROM2-201ENST00000317620 PDCP20941 246 aa16.25■□□□□ 0.19
PROM2-201ENST00000317620 NUTM2AQ8IVF1 878 aaPredicted RBP16.25■□□□□ 0.19
PROM2-201ENST00000317620 ZNF592Q92610 1267 aa16.25■□□□□ 0.19
PROM2-201ENST00000317620 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
PROM2-201ENST00000317620 KDM4AO75164 1064 aa16.25■□□□□ 0.19
PROM2-201ENST00000317620 ANKRD20A12PQ8NF67 263 aa16.25■□□□□ 0.19
PROM2-201ENST00000317620 C14orf93Q9H972 538 aaKnown RBP16.25■□□□□ 0.19
PROM2-201ENST00000317620 CTDP1Q9Y5B0 961 aaPredicted RBP16.25■□□□□ 0.19
PROM2-201ENST00000317620 GPATCH8Q9UKJ3 1502 aaKnown RBP16.25■□□□□ 0.19
PROM2-201ENST00000317620 EXOC6BQ9Y2D4 811 aa16.24■□□□□ 0.19
PROM2-201ENST00000317620 NOS1P29475 1434 aa16.24■□□□□ 0.19
PROM2-201ENST00000317620 FOXO3O43524 673 aa16.24■□□□□ 0.19
PROM2-201ENST00000317620 SART3Q15020 963 aaKnown RBP16.24■□□□□ 0.19
PROM2-201ENST00000317620 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
PROM2-201ENST00000317620 PRPF40AO75400 957 aaKnown RBP16.24■□□□□ 0.19
PROM2-201ENST00000317620 FANCAO15360 1455 aa16.24■□□□□ 0.19
PROM2-201ENST00000317620 DHX29Q7Z478 1369 aaKnown RBP16.23■□□□□ 0.19
PROM2-201ENST00000317620 AACSQ86V21 672 aa16.23■□□□□ 0.19
PROM2-201ENST00000317620 PCMTD1Q96MG8 357 aaPredicted RBP16.23■□□□□ 0.19
PROM2-201ENST00000317620 ATP2B1P20020 1258 aa16.23■□□□□ 0.19
PROM2-201ENST00000317620 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
PROM2-201ENST00000317620 CCDC57Q2TAC2 916 aa16.23■□□□□ 0.19
PROM2-201ENST00000317620 TTC39AQ5SRH9 613 aa16.23■□□□□ 0.19
PROM2-201ENST00000317620 MRE11P49959 708 aa16.23■□□□□ 0.19
PROM2-201ENST00000317620 RRP12Q5JTH9 1297 aaKnown RBP16.23■□□□□ 0.19
PROM2-201ENST00000317620 IFT57Q9NWB7 429 aa16.23■□□□□ 0.19
PROM2-201ENST00000317620 TCEAL9Q9UHQ7 104 aa16.23■□□□□ 0.19
PROM2-201ENST00000317620 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
PROM2-201ENST00000317620 FIBPO43427 364 aa16.22■□□□□ 0.19
PROM2-201ENST00000317620 IPO7O95373 1038 aaKnown RBP16.22■□□□□ 0.19
PROM2-201ENST00000317620 CYP46A1Q9Y6A2 500 aa16.22■□□□□ 0.19
PROM2-201ENST00000317620 MBD3O95983 291 aa16.22■□□□□ 0.19
PROM2-201ENST00000317620 PHF8Q9UPP1 1060 aa16.22■□□□□ 0.19
PROM2-201ENST00000317620 BIVM-ERCC5R4GMW8 1640 aa16.22■□□□□ 0.19
PROM2-201ENST00000317620 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
PROM2-201ENST00000317620 PTPRKQ15262 1439 aa16.22■□□□□ 0.19
PROM2-201ENST00000317620 SCAF11Q99590 1463 aaKnown RBP16.22■□□□□ 0.19
PROM2-201ENST00000317620 XBP1P17861 261 aa16.21■□□□□ 0.19
PROM2-201ENST00000317620 NASPP49321 788 aaPredicted RBP16.21■□□□□ 0.19
PROM2-201ENST00000317620 GOLGA6L1Q8N7Z2 621 aa16.21■□□□□ 0.19
PROM2-201ENST00000317620 SKAP1Q86WV1 359 aa16.21■□□□□ 0.19
PROM2-201ENST00000317620 ABCC11Q96J66 1382 aa16.21■□□□□ 0.19
PROM2-201ENST00000317620 CEP126Q9P2H0 1117 aa16.21■□□□□ 0.18
PROM2-201ENST00000317620 DISP3Q9P2K9 1392 aa16.2■□□□□ 0.18
PROM2-201ENST00000317620 DENND4BO75064 1496 aaPredicted RBP16.2■□□□□ 0.18
PROM2-201ENST00000317620 K7ELQ4 463 aaPredicted RBP16.2■□□□□ 0.18
PROM2-201ENST00000317620 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
PROM2-201ENST00000317620 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
PROM2-201ENST00000317620 PTCD1O75127 700 aaKnown RBP16.2■□□□□ 0.18
PROM2-201ENST00000317620 TAF7Q15545 349 aaPredicted RBP16.2■□□□□ 0.18
PROM2-201ENST00000317620 ALDH1L2Q3SY69 923 aa16.2■□□□□ 0.18
PROM2-201ENST00000317620 MPHOSPH8Q99549 860 aa16.2■□□□□ 0.18
PROM2-201ENST00000317620 RSPH6AQ9H0K4 717 aa16.2■□□□□ 0.18
PROM2-201ENST00000317620 BRMS1Q9HCU9 246 aa16.2■□□□□ 0.18
PROM2-201ENST00000317620 FKBP4Q02790 459 aaKnown RBP eCLIP16.19■□□□□ 0.18
PROM2-201ENST00000317620 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.19■□□□□ 0.18
PROM2-201ENST00000317620 CWC27Q6UX04 472 aaKnown RBP16.19■□□□□ 0.18
PROM2-201ENST00000317620 STK3Q13188 491 aa16.18■□□□□ 0.18
PROM2-201ENST00000317620 CCDC85AQ96PX6 553 aaPredicted RBP16.18■□□□□ 0.18
PROM2-201ENST00000317620 A0A0U1RQG5 324 aaPredicted RBP16.18■□□□□ 0.18
PROM2-201ENST00000317620 GNL3LQ9NVN8 582 aaKnown RBP16.18■□□□□ 0.18
PROM2-201ENST00000317620 CWC22Q9HCG8 908 aaKnown RBP16.18■□□□□ 0.18
PROM2-201ENST00000317620 F6X3S4 739 aa16.17■□□□□ 0.18
PROM2-201ENST00000317620 NUTM1Q86Y26 1132 aa16.17■□□□□ 0.18
PROM2-201ENST00000317620 ATP10BO94823 1461 aa16.17■□□□□ 0.18
PROM2-201ENST00000317620 NKTRP30414 1462 aaKnown RBP16.17■□□□□ 0.18
PROM2-201ENST00000317620 KINO60870 393 aaKnown RBP16.17■□□□□ 0.18
PROM2-201ENST00000317620 CEBPZQ03701 1054 aaKnown RBP16.17■□□□□ 0.18
PROM2-201ENST00000317620 HSP90AA2PQ14568 343 aaPredicted RBP16.17■□□□□ 0.18
PROM2-201ENST00000317620 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
PROM2-201ENST00000317620 BLOC1S2Q6QNY1 142 aa16.16■□□□□ 0.18
PROM2-201ENST00000317620 FAM135AQ9P2D6 1515 aa16.16■□□□□ 0.18
PROM2-201ENST00000317620 MPRIPQ6WCQ1 1025 aa16.16■□□□□ 0.18
PROM2-201ENST00000317620 ANKRD1Q15327 319 aa16.15■□□□□ 0.18
PROM2-201ENST00000317620 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
PROM2-201ENST00000317620 SMARCA5O60264 1052 aaPredicted RBP16.15■□□□□ 0.18
PROM2-201ENST00000317620 TRIM27P14373 513 aa16.15■□□□□ 0.18
PROM2-201ENST00000317620 FBLN1P23142 703 aa16.15■□□□□ 0.18
PROM2-201ENST00000317620 NAT10Q9H0A0 1025 aaKnown RBP16.15■□□□□ 0.18
PROM2-201ENST00000317620 ANO8Q9HCE9 1232 aaPredicted RBP16.15■□□□□ 0.18
PROM2-201ENST00000317620 AMOTQ4VCS5 1084 aa16.15■□□□□ 0.18
PROM2-201ENST00000317620 KIF1BPQ96EK5 621 aa16.15■□□□□ 0.18
PROM2-201ENST00000317620 STK11IPQ8N1F8 1099 aa16.14■□□□□ 0.18
PROM2-201ENST00000317620 STK38Q15208 465 aa16.14■□□□□ 0.17
PROM2-201ENST00000317620 NACAP1Q9BZK3 213 aa16.14■□□□□ 0.17
PROM2-201ENST00000317620 OLFM4Q6UX06 510 aa16.14■□□□□ 0.17
PROM2-201ENST00000317620 SLC3A2P08195 630 aaKnown RBP16.14■□□□□ 0.17
PROM2-201ENST00000317620 CCDC43Q96MW1 224 aaKnown RBP16.14■□□□□ 0.17
PROM2-201ENST00000317620 JAKMIP1Q96N16 626 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms