RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 RUFY1Q96T51 708 aa21.49■■□□□ 1.03
MINDY2-201ENST00000316848 CHD1LQ86WJ1 897 aa21.48■■□□□ 1.03
MINDY2-201ENST00000316848 PDILTQ8N807 584 aa21.48■■□□□ 1.03
MINDY2-201ENST00000316848 PRDM11Q9NQV5 511 aa21.48■■□□□ 1.03
MINDY2-201ENST00000316848 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
MINDY2-201ENST00000316848 ZNF771Q7L3S4 317 aaPredicted RBP21.48■■□□□ 1.03
MINDY2-201ENST00000316848 DDX54Q8TDD1 881 aaKnown RBP21.48■■□□□ 1.03
MINDY2-201ENST00000316848 NFE2L2Q16236 605 aa21.47■■□□□ 1.03
MINDY2-201ENST00000316848 CCDC57Q2TAC2 916 aa21.47■■□□□ 1.03
MINDY2-201ENST00000316848 FILIP1LQ4L180 1135 aa21.47■■□□□ 1.03
MINDY2-201ENST00000316848 KLHL34Q8N239 644 aa21.47■■□□□ 1.03
MINDY2-201ENST00000316848 PIP4K2AP48426 406 aaPredicted RBP21.47■■□□□ 1.03
MINDY2-201ENST00000316848 WDR33Q9C0J8 1336 aaKnown RBP21.47■■□□□ 1.03
MINDY2-201ENST00000316848 SRGAP3O43295 1099 aa21.47■■□□□ 1.03
MINDY2-201ENST00000316848 TRIM22Q8IYM9 498 aa21.47■■□□□ 1.03
MINDY2-201ENST00000316848 TSPY26PQ9H489 355 aa21.47■■□□□ 1.03
MINDY2-201ENST00000316848 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
MINDY2-201ENST00000316848 SIL1Q9H173 461 aa21.46■■□□□ 1.03
MINDY2-201ENST00000316848 ZSCAN25Q6NSZ9 544 aa21.46■■□□□ 1.03
MINDY2-201ENST00000316848 ODF2Q5BJF6 829 aa21.46■■□□□ 1.03
MINDY2-201ENST00000316848 CCDC173Q0VFZ6 552 aa21.46■■□□□ 1.03
MINDY2-201ENST00000316848 HSP90B2PQ58FF3 399 aa21.46■■□□□ 1.03
MINDY2-201ENST00000316848 POGZQ7Z3K3 1410 aa21.46■■□□□ 1.03
MINDY2-201ENST00000316848 RRS1Q15050 365 aaKnown RBP21.45■■□□□ 1.02
MINDY2-201ENST00000316848 MPHOSPH8Q99549 860 aa21.45■■□□□ 1.02
MINDY2-201ENST00000316848 CEP126Q9P2H0 1117 aa21.45■■□□□ 1.02
MINDY2-201ENST00000316848 K7ELQ4 463 aaPredicted RBP21.45■■□□□ 1.02
MINDY2-201ENST00000316848 TMPOP42166 694 aaKnown RBP21.45■■□□□ 1.02
MINDY2-201ENST00000316848 CDK5RAP3Q96JB5 506 aa21.45■■□□□ 1.02
MINDY2-201ENST00000316848 AK7Q96M32 723 aa21.44■■□□□ 1.02
MINDY2-201ENST00000316848 KIAA0586Q9BVV6 1533 aa21.44■■□□□ 1.02
MINDY2-201ENST00000316848 FMNL2Q96PY5 1086 aa21.44■■□□□ 1.02
MINDY2-201ENST00000316848 NUDT16Q96DE0 195 aaKnown RBP21.44■■□□□ 1.02
MINDY2-201ENST00000316848 NAIPQ13075 1403 aa21.43■■□□□ 1.02
MINDY2-201ENST00000316848 KDM4AO75164 1064 aa21.43■■□□□ 1.02
MINDY2-201ENST00000316848 MYL6BP14649 208 aa21.43■■□□□ 1.02
MINDY2-201ENST00000316848 BLOC1S2Q6QNY1 142 aa21.43■■□□□ 1.02
MINDY2-201ENST00000316848 KRT85P78386 507 aa21.43■■□□□ 1.02
MINDY2-201ENST00000316848 HMGXB3Q12766 1538 aa21.43■■□□□ 1.02
MINDY2-201ENST00000316848 SLFN5Q08AF3 891 aa21.42■■□□□ 1.02
MINDY2-201ENST00000316848 BTBD11A6QL63 1104 aa21.42■■□□□ 1.02
MINDY2-201ENST00000316848 AACSQ86V21 672 aa21.42■■□□□ 1.02
MINDY2-201ENST00000316848 SMARCE1Q969G3 411 aa21.42■■□□□ 1.02
MINDY2-201ENST00000316848 SMC2O95347 1197 aa21.42■■□□□ 1.02
MINDY2-201ENST00000316848 NSD3Q9BZ95 1437 aa21.42■■□□□ 1.02
MINDY2-201ENST00000316848 SUPT6HQ7KZ85 1726 aaKnown RBP21.42■■□□□ 1.02
MINDY2-201ENST00000316848 KCNH5Q8NCM2 988 aa21.41■■□□□ 1.02
MINDY2-201ENST00000316848 CTNNA3Q9UI47 895 aa21.41■■□□□ 1.02
MINDY2-201ENST00000316848 DHX8Q14562 1220 aaKnown RBP21.41■■□□□ 1.02
MINDY2-201ENST00000316848 CCAR1Q8IX12 1150 aaKnown RBP21.41■■□□□ 1.02
MINDY2-201ENST00000316848 CCP110O43303 1012 aa21.41■■□□□ 1.02
MINDY2-201ENST00000316848 MAGEC2Q9UBF1 373 aaPredicted RBP21.4■■□□□ 1.02
MINDY2-201ENST00000316848 EPRSP07814 1512 aaKnown RBP21.4■■□□□ 1.02
MINDY2-201ENST00000316848 CCDC192P0DO97 292 aa21.4■■□□□ 1.02
MINDY2-201ENST00000316848 KRT32Q14532 448 aa21.4■■□□□ 1.02
MINDY2-201ENST00000316848 CIZ1Q9ULV3 898 aaPredicted RBP21.4■■□□□ 1.02
MINDY2-201ENST00000316848 PDIA4P13667 645 aaKnown RBP21.4■■□□□ 1.02
MINDY2-201ENST00000316848 LARP1BQ659C4 914 aaKnown RBP21.4■■□□□ 1.02
MINDY2-201ENST00000316848 ZSCAN31Q96LW9 406 aaPredicted RBP21.39■■□□□ 1.02
MINDY2-201ENST00000316848 CEBPZQ03701 1054 aaKnown RBP21.39■■□□□ 1.01
MINDY2-201ENST00000316848 GNAT3A8MTJ3 354 aa21.39■■□□□ 1.01
MINDY2-201ENST00000316848 CCDC184Q52MB2 194 aa21.39■■□□□ 1.01
MINDY2-201ENST00000316848 MTERF4Q7Z6M4 381 aaKnown RBP21.38■■□□□ 1.01
MINDY2-201ENST00000316848 ME1P48163 572 aa21.38■■□□□ 1.01
MINDY2-201ENST00000316848 VSIG10Q8N0Z9 540 aa21.38■■□□□ 1.01
MINDY2-201ENST00000316848 CCDC141Q6ZP82 1450 aa21.38■■□□□ 1.01
MINDY2-201ENST00000316848 FKBP4Q02790 459 aaKnown RBP eCLIP21.37■■□□□ 1.01
MINDY2-201ENST00000316848 CNKSR2Q8WXI2 1034 aa21.37■■□□□ 1.01
MINDY2-201ENST00000316848 STK3Q13188 491 aa21.37■■□□□ 1.01
MINDY2-201ENST00000316848 CAGE1Q8TC20 777 aa21.37■■□□□ 1.01
MINDY2-201ENST00000316848 CCDC69A6NI79 296 aa21.37■■□□□ 1.01
MINDY2-201ENST00000316848 CDKL5O76039 1030 aa21.37■■□□□ 1.01
MINDY2-201ENST00000316848 ZFYVE27Q5T4F4 411 aa21.37■■□□□ 1.01
MINDY2-201ENST00000316848 ERCC4Q92889 916 aaPredicted RBP21.37■■□□□ 1.01
MINDY2-201ENST00000316848 IL1RAPL2Q9NP60 686 aa21.37■■□□□ 1.01
MINDY2-201ENST00000316848 KRT18P05783 430 aaKnown RBP21.36■■□□□ 1.01
MINDY2-201ENST00000316848 HMGN5P82970 282 aaKnown RBP21.36■■□□□ 1.01
MINDY2-201ENST00000316848 TMEM57Q8N5G2 664 aa21.35■■□□□ 1.01
MINDY2-201ENST00000316848 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
MINDY2-201ENST00000316848 TNMDQ9H2S6 317 aa21.35■■□□□ 1.01
MINDY2-201ENST00000316848 DACH1Q9UI36 760 aa21.35■■□□□ 1.01
MINDY2-201ENST00000316848 ABCC11Q96J66 1382 aa21.35■■□□□ 1.01
MINDY2-201ENST00000316848 MAP7D2Q96T17 732 aa21.35■■□□□ 1.01
MINDY2-201ENST00000316848 RDXP35241 583 aaKnown RBP21.35■■□□□ 1.01
MINDY2-201ENST00000316848 PPP6R1Q9UPN7 881 aa21.34■■□□□ 1.01
MINDY2-201ENST00000316848 MAP4K4O95819 1239 aaPredicted RBP21.34■■□□□ 1.01
MINDY2-201ENST00000316848 STIM1Q13586 685 aa21.34■■□□□ 1.01
MINDY2-201ENST00000316848 PDRG1Q9NUG6 133 aa21.34■■□□□ 1.01
MINDY2-201ENST00000316848 ZNHIT6Q9NWK9 470 aaKnown RBP21.34■■□□□ 1.01
MINDY2-201ENST00000316848 ZC3H6P61129 1189 aaKnown RBP21.33■■□□□ 1.01
MINDY2-201ENST00000316848 DUSP27Q5VZP5 1158 aa21.33■■□□□ 1.01
MINDY2-201ENST00000316848 NOL7Q9UMY1 257 aaKnown RBP21.33■■□□□ 1.01
MINDY2-201ENST00000316848 KIF1BPQ96EK5 621 aa21.33■■□□□ 1.01
MINDY2-201ENST00000316848 JAKMIP1Q96N16 626 aaKnown RBP21.33■■□□□ 1.01
MINDY2-201ENST00000316848 CFAP45Q9UL16 551 aa21.33■■□□□ 1.01
MINDY2-201ENST00000316848 SOGA3Q5TF21 947 aa21.33■■□□□ 1
MINDY2-201ENST00000316848 CWC27Q6UX04 472 aaKnown RBP21.33■■□□□ 1
MINDY2-201ENST00000316848 BRPF1P55201 1214 aaPredicted RBP21.33■■□□□ 1
MINDY2-201ENST00000316848 ATP2B2Q01814 1243 aa21.33■■□□□ 1
MINDY2-201ENST00000316848 MYO6Q9UM54 1294 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms