RNA–Protein interactions for RNA: ENST00000315616.11

RPUSD2-201, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPUSD2, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-201ENST00000315616 PCDHB15Q9Y5E8 787 aa18.95■□□□□ 0.62
RPUSD2-201ENST00000315616 PTCH1Q13635 1447 aa18.95■□□□□ 0.62
RPUSD2-201ENST00000315616 THUMPD2Q9BTF0 503 aaKnown RBP18.95■□□□□ 0.62
RPUSD2-201ENST00000315616 ZBTB47Q9UFB7 747 aaPredicted RBP18.95■□□□□ 0.62
RPUSD2-201ENST00000315616 PMFBP1Q8TBY8 1022 aa18.94■□□□□ 0.62
RPUSD2-201ENST00000315616 OVOS2A0A0J9YW53 1432 aa18.94■□□□□ 0.62
RPUSD2-201ENST00000315616 OVOS2Q6IE36 1432 aa18.94■□□□□ 0.62
RPUSD2-201ENST00000315616 SSH2Q76I76 1423 aa18.94■□□□□ 0.62
RPUSD2-201ENST00000315616 RGPD8O14715 1765 aaPredicted RBP18.94■□□□□ 0.62
RPUSD2-201ENST00000315616 RGS3P49796 1198 aa18.93■□□□□ 0.62
RPUSD2-201ENST00000315616 NPM2Q86SE8 214 aaKnown RBP18.93■□□□□ 0.62
RPUSD2-201ENST00000315616 ANO8Q9HCE9 1232 aaPredicted RBP18.93■□□□□ 0.62
RPUSD2-201ENST00000315616 AAMPQ13685 434 aa18.92■□□□□ 0.62
RPUSD2-201ENST00000315616 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
RPUSD2-201ENST00000315616 MVPQ14764 893 aaKnown RBP18.92■□□□□ 0.62
RPUSD2-201ENST00000315616 DZIP1LQ8IYY4 767 aaKnown RBP18.92■□□□□ 0.62
RPUSD2-201ENST00000315616 TRIM27P14373 513 aa18.91■□□□□ 0.62
RPUSD2-201ENST00000315616 LAS1LQ9Y4W2 734 aaKnown RBP18.91■□□□□ 0.62
RPUSD2-201ENST00000315616 DLG5Q8TDM6 1919 aa18.91■□□□□ 0.62
RPUSD2-201ENST00000315616 EIF4A2Q14240 407 aaKnown RBP18.91■□□□□ 0.62
RPUSD2-201ENST00000315616 XRN1Q8IZH2 1706 aaKnown RBP18.91■□□□□ 0.62
RPUSD2-201ENST00000315616 KCNA6P17658 529 aa18.9■□□□□ 0.62
RPUSD2-201ENST00000315616 NOB1Q9ULX3 412 aaKnown RBP18.9■□□□□ 0.62
RPUSD2-201ENST00000315616 C8orf34Q49A92 452 aa18.9■□□□□ 0.62
RPUSD2-201ENST00000315616 NALCNQ8IZF0 1738 aa18.9■□□□□ 0.62
RPUSD2-201ENST00000315616 PEAK1Q9H792 1746 aa18.89■□□□□ 0.61
RPUSD2-201ENST00000315616 USP31Q70CQ4 1352 aa18.89■□□□□ 0.61
RPUSD2-201ENST00000315616 AEBP1Q8IUX7 1158 aa18.89■□□□□ 0.61
RPUSD2-201ENST00000315616 FTSJ3Q8IY81 847 aaKnown RBP18.89■□□□□ 0.61
RPUSD2-201ENST00000315616 HSP90AB2PQ58FF8 381 aa18.88■□□□□ 0.61
RPUSD2-201ENST00000315616 ATF7IPQ6VMQ6 1270 aa18.88■□□□□ 0.61
RPUSD2-201ENST00000315616 ZNF853P0CG23 659 aa18.88■□□□□ 0.61
RPUSD2-201ENST00000315616 FAM161AQ3B820 660 aa18.88■□□□□ 0.61
RPUSD2-201ENST00000315616 FAM83GA6ND36 823 aa18.87■□□□□ 0.61
RPUSD2-201ENST00000315616 SOX12O15370 315 aa18.87■□□□□ 0.61
RPUSD2-201ENST00000315616 NGDNQ8NEJ9 315 aaKnown RBP18.86■□□□□ 0.61
RPUSD2-201ENST00000315616 ALDH1L2Q3SY69 923 aa18.86■□□□□ 0.61
RPUSD2-201ENST00000315616 SULT6B1Q6IMI4 303 aa18.86■□□□□ 0.61
RPUSD2-201ENST00000315616 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
RPUSD2-201ENST00000315616 TTC21AQ8NDW8 1320 aa18.86■□□□□ 0.61
RPUSD2-201ENST00000315616 VAMP4O75379 141 aa18.85■□□□□ 0.61
RPUSD2-201ENST00000315616 CALD1Q05682 793 aaKnown RBP18.85■□□□□ 0.61
RPUSD2-201ENST00000315616 TSPYL6Q8N831 410 aa18.85■□□□□ 0.61
RPUSD2-201ENST00000315616 MBIPQ9NS73 344 aa18.85■□□□□ 0.61
RPUSD2-201ENST00000315616 GNAI1P63096 354 aa18.85■□□□□ 0.61
RPUSD2-201ENST00000315616 DCTN1Q14203 1278 aa18.84■□□□□ 0.61
RPUSD2-201ENST00000315616 USP35Q9P2H5 1018 aa18.84■□□□□ 0.61
RPUSD2-201ENST00000315616 PIK3R4Q99570 1358 aa18.83■□□□□ 0.61
RPUSD2-201ENST00000315616 MAP3K19Q56UN5 1328 aa18.83■□□□□ 0.6
RPUSD2-201ENST00000315616 TMEM57Q8N5G2 664 aa18.83■□□□□ 0.6
RPUSD2-201ENST00000315616 CFAP44Q96MT7 982 aa18.83■□□□□ 0.6
RPUSD2-201ENST00000315616 KIF16BQ96L93 1317 aa18.82■□□□□ 0.6
RPUSD2-201ENST00000315616 LMOD3Q0VAK6 560 aa18.82■□□□□ 0.6
RPUSD2-201ENST00000315616 ITPRIPQ8IWB1 547 aa18.82■□□□□ 0.6
RPUSD2-201ENST00000315616 RGPD1P0DJD0 1748 aa18.82■□□□□ 0.6
RPUSD2-201ENST00000315616 ELL2O00472 640 aaPredicted RBP18.82■□□□□ 0.6
RPUSD2-201ENST00000315616 BRPF1P55201 1214 aaPredicted RBP18.82■□□□□ 0.6
RPUSD2-201ENST00000315616 ZNF428Q96B54 188 aa18.82■□□□□ 0.6
RPUSD2-201ENST00000315616 RWDD1Q9H446 243 aaPredicted RBP18.82■□□□□ 0.6
RPUSD2-201ENST00000315616 IPO8O15397 1037 aaKnown RBP18.81■□□□□ 0.6
RPUSD2-201ENST00000315616 DDX19BQ9UMR2 479 aa18.81■□□□□ 0.6
RPUSD2-201ENST00000315616 PIK3C2AO00443 1686 aa18.81■□□□□ 0.6
RPUSD2-201ENST00000315616 ANKLE2Q86XL3 938 aa18.81■□□□□ 0.6
RPUSD2-201ENST00000315616 ANKARQ7Z5J8 1434 aa18.8■□□□□ 0.6
RPUSD2-201ENST00000315616 C8orf58Q8NAV2 365 aa18.8■□□□□ 0.6
RPUSD2-201ENST00000315616 PDZRN3Q9UPQ7 1066 aa18.8■□□□□ 0.6
RPUSD2-201ENST00000315616 MRPL50Q8N5N7 158 aaKnown RBP18.79■□□□□ 0.6
RPUSD2-201ENST00000315616 FMN2Q9NZ56 1722 aa18.79■□□□□ 0.6
RPUSD2-201ENST00000315616 CHD2O14647 1828 aaKnown RBP18.79■□□□□ 0.6
RPUSD2-201ENST00000315616 RBM33Q96EV2 1170 aaKnown RBP18.78■□□□□ 0.6
RPUSD2-201ENST00000315616 ZBTB40Q9NUA8 1239 aa18.78■□□□□ 0.6
RPUSD2-201ENST00000315616 TWISTNBQ3B726 338 aaPredicted RBP18.77■□□□□ 0.6
RPUSD2-201ENST00000315616 NLRP6P59044 892 aa18.77■□□□□ 0.6
RPUSD2-201ENST00000315616 IL27Q8NEV9 243 aa18.77■□□□□ 0.6
RPUSD2-201ENST00000315616 SBNO1A3KN83 1393 aa18.77■□□□□ 0.59
RPUSD2-201ENST00000315616 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
RPUSD2-201ENST00000315616 MCM10Q7L590 875 aa18.76■□□□□ 0.59
RPUSD2-201ENST00000315616 FLT4P35916 1363 aa18.76■□□□□ 0.59
RPUSD2-201ENST00000315616 MARF1Q9Y4F3 1742 aaKnown RBP18.75■□□□□ 0.59
RPUSD2-201ENST00000315616 HDAC1Q13547 482 aaPredicted RBP18.75■□□□□ 0.59
RPUSD2-201ENST00000315616 LMTK3Q96Q04 1460 aa18.75■□□□□ 0.59
RPUSD2-201ENST00000315616 VIRMAQ69YN4 1812 aaKnown RBP18.74■□□□□ 0.59
RPUSD2-201ENST00000315616 ARHGAP45Q92619 1136 aa18.74■□□□□ 0.59
RPUSD2-201ENST00000315616 ARHGEF10O15013 1369 aa18.74■□□□□ 0.59
RPUSD2-201ENST00000315616 AMPHP49418 695 aa18.74■□□□□ 0.59
RPUSD2-201ENST00000315616 EYA1Q99502 592 aa18.73■□□□□ 0.59
RPUSD2-201ENST00000315616 CHL1O00533 1208 aa18.73■□□□□ 0.59
RPUSD2-201ENST00000315616 FOXO3O43524 673 aa18.73■□□□□ 0.59
RPUSD2-201ENST00000315616 SEC24BO95487 1268 aa18.72■□□□□ 0.59
RPUSD2-201ENST00000315616 ABTB2Q8N961 1025 aa18.72■□□□□ 0.59
RPUSD2-201ENST00000315616 ZBTB7BO15156 539 aaPredicted RBP18.71■□□□□ 0.59
RPUSD2-201ENST00000315616 MTHFSDQ2M296 383 aaKnown RBP18.71■□□□□ 0.59
RPUSD2-201ENST00000315616 KRT24Q2M2I5 525 aa18.71■□□□□ 0.59
RPUSD2-201ENST00000315616 KDRP35968 1356 aa18.71■□□□□ 0.59
RPUSD2-201ENST00000315616 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.58
RPUSD2-201ENST00000315616 PHF8Q9UPP1 1060 aa18.7■□□□□ 0.58
RPUSD2-201ENST00000315616 USP19O94966 1318 aa18.7■□□□□ 0.58
RPUSD2-201ENST00000315616 SMC5Q8IY18 1101 aa18.69■□□□□ 0.58
RPUSD2-201ENST00000315616 DDRGK1Q96HY6 314 aa18.69■□□□□ 0.58
RPUSD2-201ENST00000315616 CRB1P82279 1406 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms