RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 IFT57Q9NWB7 429 aa17.25■□□□□ 0.35
MKS1-201ENST00000313863 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
MKS1-201ENST00000313863 LMOD3Q0VAK6 560 aa17.25■□□□□ 0.35
MKS1-201ENST00000313863 MRPL50Q8N5N7 158 aaKnown RBP17.25■□□□□ 0.35
MKS1-201ENST00000313863 KIF24Q5T7B8 1368 aa17.25■□□□□ 0.35
MKS1-201ENST00000313863 DLC1Q96QB1 1528 aa17.25■□□□□ 0.35
MKS1-201ENST00000313863 ALKQ9UM73 1620 aa17.25■□□□□ 0.35
MKS1-201ENST00000313863 TNPO1Q92973 898 aaKnown RBP17.24■□□□□ 0.35
MKS1-201ENST00000313863 GOLGA6L22H0YM25 854 aa17.24■□□□□ 0.35
MKS1-201ENST00000313863 ARXQ96QS3 562 aa17.24■□□□□ 0.35
MKS1-201ENST00000313863 CDK19Q9BWU1 502 aa17.24■□□□□ 0.35
MKS1-201ENST00000313863 K7ELQ4 463 aaPredicted RBP17.23■□□□□ 0.35
MKS1-201ENST00000313863 VAMP4O75379 141 aa17.23■□□□□ 0.35
MKS1-201ENST00000313863 API5Q9BZZ5 524 aaKnown RBP17.23■□□□□ 0.35
MKS1-201ENST00000313863 ABCC4O15439 1325 aa17.22■□□□□ 0.35
MKS1-201ENST00000313863 PANK2Q9BZ23 570 aa17.22■□□□□ 0.35
MKS1-201ENST00000313863 CDC45O75419 566 aa17.22■□□□□ 0.35
MKS1-201ENST00000313863 RAPGEF3O95398 923 aa17.21■□□□□ 0.35
MKS1-201ENST00000313863 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
MKS1-201ENST00000313863 CABP1Q9NZU7 370 aa17.2■□□□□ 0.34
MKS1-201ENST00000313863 POLKQ9UBT6 870 aa17.2■□□□□ 0.34
MKS1-201ENST00000313863 CDK12Q9NYV4 1490 aaPredicted RBP17.2■□□□□ 0.34
MKS1-201ENST00000313863 DLG5Q8TDM6 1919 aa17.2■□□□□ 0.34
MKS1-201ENST00000313863 HAP1P54257 671 aaPredicted RBP17.2■□□□□ 0.34
MKS1-201ENST00000313863 KIF2CQ99661 725 aa17.19■□□□□ 0.34
MKS1-201ENST00000313863 ZNF853P0CG23 659 aa17.19■□□□□ 0.34
MKS1-201ENST00000313863 CLEC17AQ6ZS10 378 aa17.19■□□□□ 0.34
MKS1-201ENST00000313863 TRIM44Q96DX7 344 aaPredicted RBP17.19■□□□□ 0.34
MKS1-201ENST00000313863 EDC4Q6P2E9 1401 aaKnown RBP17.18■□□□□ 0.34
MKS1-201ENST00000313863 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
MKS1-201ENST00000313863 RABEP1Q15276 862 aa17.17■□□□□ 0.34
MKS1-201ENST00000313863 IBTKQ9P2D0 1353 aaPredicted RBP17.17■□□□□ 0.34
MKS1-201ENST00000313863 TWISTNBQ3B726 338 aaPredicted RBP17.16■□□□□ 0.34
MKS1-201ENST00000313863 NAP1L5Q96NT1 182 aaPredicted RBP17.16■□□□□ 0.34
MKS1-201ENST00000313863 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
MKS1-201ENST00000313863 ESPNB1AK53 854 aa17.16■□□□□ 0.34
MKS1-201ENST00000313863 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
MKS1-201ENST00000313863 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
MKS1-201ENST00000313863 ANP32BQ92688 251 aaKnown RBP17.15■□□□□ 0.34
MKS1-201ENST00000313863 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.14■□□□□ 0.33
MKS1-201ENST00000313863 IL13P35225 146 aa17.14■□□□□ 0.33
MKS1-201ENST00000313863 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.33
MKS1-201ENST00000313863 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
MKS1-201ENST00000313863 CPSF1Q10570 1443 aaKnown RBP17.14■□□□□ 0.33
MKS1-201ENST00000313863 HMOX1P09601 288 aa17.13■□□□□ 0.33
MKS1-201ENST00000313863 NUCB2P80303 420 aa17.13■□□□□ 0.33
MKS1-201ENST00000313863 CASC1Q6TDU7 716 aa17.13■□□□□ 0.33
MKS1-201ENST00000313863 SIRT2Q8IXJ6 389 aa17.13■□□□□ 0.33
MKS1-201ENST00000313863 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
MKS1-201ENST00000313863 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
MKS1-201ENST00000313863 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
MKS1-201ENST00000313863 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
MKS1-201ENST00000313863 DCTPP1Q9H773 170 aa17.12■□□□□ 0.33
MKS1-201ENST00000313863 CCDC173Q0VFZ6 552 aa17.12■□□□□ 0.33
MKS1-201ENST00000313863 KLHL40Q2TBA0 621 aa17.12■□□□□ 0.33
MKS1-201ENST00000313863 SETD1AO15047 1707 aaKnown RBP17.12■□□□□ 0.33
MKS1-201ENST00000313863 MON2Q7Z3U7 1717 aa17.12■□□□□ 0.33
MKS1-201ENST00000313863 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
MKS1-201ENST00000313863 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
MKS1-201ENST00000313863 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
MKS1-201ENST00000313863 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
MKS1-201ENST00000313863 TTC22Q5TAA0 569 aa17.11■□□□□ 0.33
MKS1-201ENST00000313863 KNDC1Q76NI1 1749 aa17.1■□□□□ 0.33
MKS1-201ENST00000313863 PLEKHM2Q8IWE5 1019 aa17.1■□□□□ 0.33
MKS1-201ENST00000313863 RPAP2Q8IXW5 612 aaPredicted RBP17.1■□□□□ 0.33
MKS1-201ENST00000313863 THUMPD2Q9BTF0 503 aaKnown RBP17.1■□□□□ 0.33
MKS1-201ENST00000313863 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
MKS1-201ENST00000313863 ITSN1Q15811 1721 aa17.09■□□□□ 0.33
MKS1-201ENST00000313863 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
MKS1-201ENST00000313863 GAS2L2Q8NHY3 880 aa17.09■□□□□ 0.33
MKS1-201ENST00000313863 SSFA2P28290 1259 aa17.09■□□□□ 0.33
MKS1-201ENST00000313863 GLIPR1L2Q4G1C9 344 aa17.09■□□□□ 0.33
MKS1-201ENST00000313863 BAG4O95429 457 aaKnown RBP17.08■□□□□ 0.33
MKS1-201ENST00000313863 COG3Q96JB2 828 aa17.08■□□□□ 0.33
MKS1-201ENST00000313863 DDX49Q9Y6V7 483 aaKnown RBP17.08■□□□□ 0.33
MKS1-201ENST00000313863 AKAP12Q02952 1782 aa17.08■□□□□ 0.32
MKS1-201ENST00000313863 NRKQ7Z2Y5 1582 aa17.08■□□□□ 0.32
MKS1-201ENST00000313863 AGLP35573 1532 aa17.08■□□□□ 0.32
MKS1-201ENST00000313863 ELL2O00472 640 aaPredicted RBP17.08■□□□□ 0.32
MKS1-201ENST00000313863 GAS2L3Q86XJ1 694 aa17.08■□□□□ 0.32
MKS1-201ENST00000313863 ANKRD44Q8N8A2 993 aa17.08■□□□□ 0.32
MKS1-201ENST00000313863 C8orf58Q8NAV2 365 aa17.08■□□□□ 0.32
MKS1-201ENST00000313863 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.32
MKS1-201ENST00000313863 EMILIN1Q9Y6C2 1016 aa17.08■□□□□ 0.32
MKS1-201ENST00000313863 ST18O60284 1047 aa17.07■□□□□ 0.32
MKS1-201ENST00000313863 GSPT1P15170 499 aaKnown RBP17.07■□□□□ 0.32
MKS1-201ENST00000313863 PPP1R9BQ96SB3 815 aa17.07■□□□□ 0.32
MKS1-201ENST00000313863 AK9Q5TCS8 1911 aa17.07■□□□□ 0.32
MKS1-201ENST00000313863 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
MKS1-201ENST00000313863 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
MKS1-201ENST00000313863 A2ML1A8K2U0 1454 aa17.06■□□□□ 0.32
MKS1-201ENST00000313863 USP26Q9BXU7 913 aa17.06■□□□□ 0.32
MKS1-201ENST00000313863 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
MKS1-201ENST00000313863 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
MKS1-201ENST00000313863 KIAA0232Q92628 1395 aa17.05■□□□□ 0.32
MKS1-201ENST00000313863 PTPRCP08575 1304 aa17.05■□□□□ 0.32
MKS1-201ENST00000313863 WASLO00401 505 aaPredicted RBP17.05■□□□□ 0.32
MKS1-201ENST00000313863 REC8O95072 547 aa17.05■□□□□ 0.32
MKS1-201ENST00000313863 C3P01024 1663 aa17.05■□□□□ 0.32
MKS1-201ENST00000313863 ZNF445P59923 1031 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms