RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
LRRFIP1-203ENST00000308482 RBSNQ9H1K0 784 aa17.88■□□□□ 0.45
LRRFIP1-203ENST00000308482 C16orf71Q8IYS4 520 aaPredicted RBP17.87■□□□□ 0.45
LRRFIP1-203ENST00000308482 PUS7Q96PZ0 661 aaKnown RBP17.87■□□□□ 0.45
LRRFIP1-203ENST00000308482 ABCA9Q8IUA7 1624 aa17.87■□□□□ 0.45
LRRFIP1-203ENST00000308482 HMOX1P09601 288 aa17.87■□□□□ 0.45
LRRFIP1-203ENST00000308482 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
LRRFIP1-203ENST00000308482 PDCL3Q9H2J4 239 aa17.86■□□□□ 0.45
LRRFIP1-203ENST00000308482 LMBRD1Q9NUN5 540 aa17.86■□□□□ 0.45
LRRFIP1-203ENST00000308482 RBM27Q9P2N5 1060 aaKnown RBP17.86■□□□□ 0.45
LRRFIP1-203ENST00000308482 IBTKQ9P2D0 1353 aaPredicted RBP17.86■□□□□ 0.45
LRRFIP1-203ENST00000308482 CALD1Q05682 793 aaKnown RBP17.86■□□□□ 0.45
LRRFIP1-203ENST00000308482 PLEKHM2Q8IWE5 1019 aa17.86■□□□□ 0.45
LRRFIP1-203ENST00000308482 ZNF445P59923 1031 aa17.85■□□□□ 0.45
LRRFIP1-203ENST00000308482 KIDINS220Q9ULH0 1771 aa17.85■□□□□ 0.45
LRRFIP1-203ENST00000308482 PRIM1P49642 420 aaKnown RBP17.85■□□□□ 0.45
LRRFIP1-203ENST00000308482 ZGPATQ8N5A5 531 aaKnown RBP17.85■□□□□ 0.45
LRRFIP1-203ENST00000308482 R3HCC1Q9Y3T6 440 aaKnown RBP17.85■□□□□ 0.45
LRRFIP1-203ENST00000308482 CAMSAP1Q5T5Y3 1602 aa17.85■□□□□ 0.45
LRRFIP1-203ENST00000308482 LMTK2Q8IWU2 1503 aa17.84■□□□□ 0.45
LRRFIP1-203ENST00000308482 LRRC7Q96NW7 1537 aa17.84■□□□□ 0.45
LRRFIP1-203ENST00000308482 BRPF1P55201 1214 aaPredicted RBP17.84■□□□□ 0.45
LRRFIP1-203ENST00000308482 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
LRRFIP1-203ENST00000308482 OTUD7AQ8TE49 926 aaPredicted RBP17.84■□□□□ 0.45
LRRFIP1-203ENST00000308482 PRPF40AO75400 957 aaKnown RBP17.84■□□□□ 0.45
LRRFIP1-203ENST00000308482 RABEP1Q15276 862 aa17.84■□□□□ 0.45
LRRFIP1-203ENST00000308482 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.84■□□□□ 0.45
LRRFIP1-203ENST00000308482 CYP2E1P05181 493 aaPredicted RBP17.83■□□□□ 0.45
LRRFIP1-203ENST00000308482 RPGRIP1LQ68CZ1 1315 aa17.83■□□□□ 0.44
LRRFIP1-203ENST00000308482 FCHSD2O94868 740 aa17.83■□□□□ 0.44
LRRFIP1-203ENST00000308482 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.82■□□□□ 0.44
LRRFIP1-203ENST00000308482 GPT2Q8TD30 523 aa17.82■□□□□ 0.44
LRRFIP1-203ENST00000308482 USP26Q9BXU7 913 aa17.82■□□□□ 0.44
LRRFIP1-203ENST00000308482 MBIPQ9NS73 344 aa17.82■□□□□ 0.44
LRRFIP1-203ENST00000308482 ABCC4O15439 1325 aa17.82■□□□□ 0.44
LRRFIP1-203ENST00000308482 PTCH1Q13635 1447 aa17.82■□□□□ 0.44
LRRFIP1-203ENST00000308482 VGFO15240 615 aaPredicted RBP17.82■□□□□ 0.44
LRRFIP1-203ENST00000308482 TERF2IPQ9NYB0 399 aa17.82■□□□□ 0.44
LRRFIP1-203ENST00000308482 PIK3R4Q99570 1358 aa17.82■□□□□ 0.44
LRRFIP1-203ENST00000308482 APBB1O00213 710 aa17.81■□□□□ 0.44
LRRFIP1-203ENST00000308482 NUCB2P80303 420 aa17.81■□□□□ 0.44
LRRFIP1-203ENST00000308482 ARHGAP45Q92619 1136 aa17.81■□□□□ 0.44
LRRFIP1-203ENST00000308482 PNPLA6Q8IY17 1366 aa17.81■□□□□ 0.44
LRRFIP1-203ENST00000308482 CD163L1Q9NR16 1453 aa17.81■□□□□ 0.44
LRRFIP1-203ENST00000308482 FOXD4L5Q5VV16 416 aaPredicted RBP17.81■□□□□ 0.44
LRRFIP1-203ENST00000308482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.446e-7■■□□□ 12.7
LRRFIP1-203ENST00000308482 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
LRRFIP1-203ENST00000308482 FOXD4L4Q8WXT5 416 aaPredicted RBP17.81■□□□□ 0.44
LRRFIP1-203ENST00000308482 FAM13BQ9NYF5 915 aa17.81■□□□□ 0.44
LRRFIP1-203ENST00000308482 TTC22Q5TAA0 569 aa17.8■□□□□ 0.44
LRRFIP1-203ENST00000308482 ZDHHC9Q9Y397 364 aa17.8■□□□□ 0.44
LRRFIP1-203ENST00000308482 ZNF428Q96B54 188 aa17.8■□□□□ 0.44
LRRFIP1-203ENST00000308482 NSFL1CQ9UNZ2 370 aaKnown RBP17.8■□□□□ 0.44
LRRFIP1-203ENST00000308482 TWISTNBQ3B726 338 aaPredicted RBP17.79■□□□□ 0.44
LRRFIP1-203ENST00000308482 PRAM1Q96QH2 718 aa17.79■□□□□ 0.44
LRRFIP1-203ENST00000308482 NOL7Q9UMY1 257 aaKnown RBP17.79■□□□□ 0.44
LRRFIP1-203ENST00000308482 FAM135BQ49AJ0 1406 aa17.79■□□□□ 0.44
LRRFIP1-203ENST00000308482 NFE2L2Q16236 605 aa17.79■□□□□ 0.44
LRRFIP1-203ENST00000308482 CHMP4BQ9H444 224 aaKnown RBP17.79■□□□□ 0.44
LRRFIP1-203ENST00000308482 PDLIM2Q96JY6 352 aa17.79■□□□□ 0.44
LRRFIP1-203ENST00000308482 CABP1Q9NZU7 370 aa17.79■□□□□ 0.44
LRRFIP1-203ENST00000308482 SMARCA5O60264 1052 aaPredicted RBP17.78■□□□□ 0.44
LRRFIP1-203ENST00000308482 POLKQ9UBT6 870 aa17.78■□□□□ 0.44
LRRFIP1-203ENST00000308482 ARHGAP31Q2M1Z3 1444 aa17.78■□□□□ 0.44
LRRFIP1-203ENST00000308482 ARID3AQ99856 593 aa17.78■□□□□ 0.44
LRRFIP1-203ENST00000308482 TMEM63CQ9P1W3 806 aa17.78■□□□□ 0.44
LRRFIP1-203ENST00000308482 KNDC1Q76NI1 1749 aa17.77■□□□□ 0.44
LRRFIP1-203ENST00000308482 SYCE3A1L190 88 aa17.77■□□□□ 0.44
LRRFIP1-203ENST00000308482 FAM83GA6ND36 823 aa17.77■□□□□ 0.44
LRRFIP1-203ENST00000308482 DCTPP1Q9H773 170 aa17.77■□□□□ 0.44
LRRFIP1-203ENST00000308482 SDSP20132 328 aa17.76■□□□□ 0.43
LRRFIP1-203ENST00000308482 NEXMIFQ5QGS0 1516 aa17.76■□□□□ 0.43
LRRFIP1-203ENST00000308482 GNAI1P63096 354 aa17.76■□□□□ 0.43
LRRFIP1-203ENST00000308482 DCTN1Q14203 1278 aa17.76■□□□□ 0.43
LRRFIP1-203ENST00000308482 RNF214Q8ND24 703 aa17.75■□□□□ 0.43
LRRFIP1-203ENST00000308482 UQCRHLA0A096LP55 91 aa17.75■□□□□ 0.43
LRRFIP1-203ENST00000308482 ZNF500O60304 480 aaPredicted RBP17.75■□□□□ 0.43
LRRFIP1-203ENST00000308482 UQCRHP07919 91 aa17.75■□□□□ 0.43
LRRFIP1-203ENST00000308482 INTS3Q68E01 1043 aaKnown RBP17.75■□□□□ 0.43
LRRFIP1-203ENST00000308482 HDGFL2Q7Z4V5 671 aaPredicted RBP17.75■□□□□ 0.43
LRRFIP1-203ENST00000308482 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
LRRFIP1-203ENST00000308482 ZNF853P0CG23 659 aa17.74■□□□□ 0.43
LRRFIP1-203ENST00000308482 IDI1Q13907 227 aa17.74■□□□□ 0.43
LRRFIP1-203ENST00000308482 HS1BP3Q53T59 392 aa17.74■□□□□ 0.43
LRRFIP1-203ENST00000308482 EMILIN1Q9Y6C2 1016 aa17.74■□□□□ 0.43
LRRFIP1-203ENST00000308482 ANKRD26Q9UPS8 1709 aa17.74■□□□□ 0.43
LRRFIP1-203ENST00000308482 SIGLEC1Q9BZZ2 1709 aa17.74■□□□□ 0.43
LRRFIP1-203ENST00000308482 ZBTB7CA1YPR0 619 aa17.74■□□□□ 0.43
LRRFIP1-203ENST00000308482 CDK19Q9BWU1 502 aa17.74■□□□□ 0.43
LRRFIP1-203ENST00000308482 ZKSCAN5Q9Y2L8 839 aa17.74■□□□□ 0.43
LRRFIP1-203ENST00000308482 FRMPD1Q5SYB0 1578 aa17.73■□□□□ 0.43
LRRFIP1-203ENST00000308482 API5Q9BZZ5 524 aaKnown RBP17.73■□□□□ 0.43
LRRFIP1-203ENST00000308482 ST18O60284 1047 aa17.73■□□□□ 0.43
LRRFIP1-203ENST00000308482 KRT24Q2M2I5 525 aa17.73■□□□□ 0.43
LRRFIP1-203ENST00000308482 CWC22Q9HCG8 908 aaKnown RBP17.73■□□□□ 0.43
LRRFIP1-203ENST00000308482 TERF1P54274 439 aa17.72■□□□□ 0.43
LRRFIP1-203ENST00000308482 LRSAM1Q6UWE0 723 aa17.72■□□□□ 0.43
LRRFIP1-203ENST00000308482 PTPRMP28827 1452 aa17.71■□□□□ 0.43
LRRFIP1-203ENST00000308482 ABCC3O15438 1527 aa17.71■□□□□ 0.43
LRRFIP1-203ENST00000308482 ZFYVE9O95405 1425 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms