RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PMFBP1Q8TBY8 1022 aa15.62■□□□□ 0.09
TRIM40-205ENST00000307859 PLEKHF1Q96S99 279 aa15.62■□□□□ 0.09
TRIM40-205ENST00000307859 RGPD1P0DJD0 1748 aa15.62■□□□□ 0.09
TRIM40-205ENST00000307859 FBLN1P23142 703 aa15.61■□□□□ 0.09
TRIM40-205ENST00000307859 WWC1Q8IX03 1113 aa15.61■□□□□ 0.09
TRIM40-205ENST00000307859 NGDNQ8NEJ9 315 aaKnown RBP15.61■□□□□ 0.09
TRIM40-205ENST00000307859 EMILIN1Q9Y6C2 1016 aa15.61■□□□□ 0.09
TRIM40-205ENST00000307859 DLG5Q8TDM6 1919 aa15.61■□□□□ 0.09
TRIM40-205ENST00000307859 U2SURPO15042 1029 aaKnown RBP15.61■□□□□ 0.09
TRIM40-205ENST00000307859 KIF1AQ12756 1690 aa15.61■□□□□ 0.09
TRIM40-205ENST00000307859 E9PSI1 815 aa15.6■□□□□ 0.09
TRIM40-205ENST00000307859 RRP1P56182 461 aaKnown RBP15.6■□□□□ 0.09
TRIM40-205ENST00000307859 TRPC5Q9UL62 973 aaPredicted RBP15.6■□□□□ 0.09
TRIM40-205ENST00000307859 IL13P35225 146 aa15.58■□□□□ 0.09
TRIM40-205ENST00000307859 PNNQ9H307 717 aaKnown RBP15.58■□□□□ 0.09
TRIM40-205ENST00000307859 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.09
TRIM40-205ENST00000307859 FCHSD2O94868 740 aa15.57■□□□□ 0.08
TRIM40-205ENST00000307859 WDR63Q8IWG1 891 aa15.57■□□□□ 0.08
TRIM40-205ENST00000307859 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
TRIM40-205ENST00000307859 PHF8Q9UPP1 1060 aa15.57■□□□□ 0.08
TRIM40-205ENST00000307859 LTN1O94822 1766 aa15.57■□□□□ 0.08
TRIM40-205ENST00000307859 TRPM3Q9HCF6 1732 aaPredicted RBP15.57■□□□□ 0.08
TRIM40-205ENST00000307859 LRP5O75197 1615 aa15.57■□□□□ 0.08
TRIM40-205ENST00000307859 NHSL1Q5SYE7 1610 aa15.57■□□□□ 0.08
TRIM40-205ENST00000307859 PPM1GO15355 546 aaPredicted RBP15.57■□□□□ 0.08
TRIM40-205ENST00000307859 RRS1Q15050 365 aaKnown RBP15.57■□□□□ 0.08
TRIM40-205ENST00000307859 RRP7AQ9Y3A4 280 aaKnown RBP15.57■□□□□ 0.08
TRIM40-205ENST00000307859 MAPK8IP3Q9UPT6 1336 aa15.56■□□□□ 0.08
TRIM40-205ENST00000307859 RSPH6AQ9H0K4 717 aa15.56■□□□□ 0.08
TRIM40-205ENST00000307859 USP21Q9UK80 565 aa15.56■□□□□ 0.08
TRIM40-205ENST00000307859 FNBP4Q8N3X1 1017 aaPredicted RBP15.55■□□□□ 0.08
TRIM40-205ENST00000307859 TMPOP42166 694 aaKnown RBP15.54■□□□□ 0.08
TRIM40-205ENST00000307859 PELP1Q8IZL8 1130 aaKnown RBP15.54■□□□□ 0.08
TRIM40-205ENST00000307859 ATRNO75882 1429 aa15.54■□□□□ 0.08
TRIM40-205ENST00000307859 MST1RQ04912 1400 aa15.54■□□□□ 0.08
TRIM40-205ENST00000307859 PHRF1Q9P1Y6 1649 aaKnown RBP15.54■□□□□ 0.08
TRIM40-205ENST00000307859 NEUROD2Q15784 382 aa15.54■□□□□ 0.08
TRIM40-205ENST00000307859 SBNO1A3KN83 1393 aa15.53■□□□□ 0.08
TRIM40-205ENST00000307859 ADAMTS2O95450 1211 aa15.52■□□□□ 0.08
TRIM40-205ENST00000307859 KIF24Q5T7B8 1368 aa15.52■□□□□ 0.07
TRIM40-205ENST00000307859 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
TRIM40-205ENST00000307859 TRIM35Q9UPQ4 493 aa15.51■□□□□ 0.07
TRIM40-205ENST00000307859 FLT4P35916 1363 aa15.51■□□□□ 0.07
TRIM40-205ENST00000307859 C1orf167Q5SNV9 1468 aa15.51■□□□□ 0.07
TRIM40-205ENST00000307859 MAP3K19Q56UN5 1328 aa15.51■□□□□ 0.07
TRIM40-205ENST00000307859 NFAT5O94916 1531 aa15.51■□□□□ 0.07
TRIM40-205ENST00000307859 ALS2Q96Q42 1657 aa15.5■□□□□ 0.07
TRIM40-205ENST00000307859 NLRP6P59044 892 aa15.5■□□□□ 0.07
TRIM40-205ENST00000307859 EIF4A2Q14240 407 aaKnown RBP15.5■□□□□ 0.07
TRIM40-205ENST00000307859 ESCO1Q5FWF5 840 aa15.5■□□□□ 0.07
TRIM40-205ENST00000307859 IL16Q14005 1332 aa15.49■□□□□ 0.07
TRIM40-205ENST00000307859 NEFMP07197 916 aa15.48■□□□□ 0.07
TRIM40-205ENST00000307859 HMOX1P09601 288 aa15.48■□□□□ 0.07
TRIM40-205ENST00000307859 ARHGEF10O15013 1369 aa15.48■□□□□ 0.07
TRIM40-205ENST00000307859 SLIT3O75094 1523 aa15.47■□□□□ 0.07
TRIM40-205ENST00000307859 RIPK4P57078 832 aa15.47■□□□□ 0.07
TRIM40-205ENST00000307859 ABTB2Q8N961 1025 aa15.47■□□□□ 0.07
TRIM40-205ENST00000307859 MYH16Q9H6N6 1097 aa15.47■□□□□ 0.07
TRIM40-205ENST00000307859 NFE2L2Q16236 605 aa15.46■□□□□ 0.07
TRIM40-205ENST00000307859 HSP90AB2PQ58FF8 381 aa15.46■□□□□ 0.07
TRIM40-205ENST00000307859 RTL1A6NKG5 1358 aa15.46■□□□□ 0.07
TRIM40-205ENST00000307859 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.06
TRIM40-205ENST00000307859 PSME1Q06323 249 aa15.46■□□□□ 0.06
TRIM40-205ENST00000307859 PHACTR3Q96KR7 559 aa15.46■□□□□ 0.06
TRIM40-205ENST00000307859 ORAI2Q96SN7 254 aa15.46■□□□□ 0.06
TRIM40-205ENST00000307859 SOX12O15370 315 aa15.45■□□□□ 0.06
TRIM40-205ENST00000307859 B4GALNT3Q6L9W6 998 aa15.45■□□□□ 0.06
TRIM40-205ENST00000307859 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.45■□□□□ 0.06
TRIM40-205ENST00000307859 DDX17Q92841 729 aaKnown RBP15.45■□□□□ 0.06
TRIM40-205ENST00000307859 PLIN1O60240 522 aa15.44■□□□□ 0.06
TRIM40-205ENST00000307859 SOS2Q07890 1332 aaPredicted RBP15.44■□□□□ 0.06
TRIM40-205ENST00000307859 KDRP35968 1356 aa15.44■□□□□ 0.06
TRIM40-205ENST00000307859 EXOC6Q8TAG9 804 aa15.43■□□□□ 0.06
TRIM40-205ENST00000307859 FANCIQ9NVI1 1328 aa15.43■□□□□ 0.06
TRIM40-205ENST00000307859 RGPD2P0DJD1 1756 aa15.43■□□□□ 0.06
TRIM40-205ENST00000307859 AMPHP49418 695 aa15.43■□□□□ 0.06
TRIM40-205ENST00000307859 SF3B2Q13435 895 aaKnown RBP15.43■□□□□ 0.06
TRIM40-205ENST00000307859 NUTM2GQ5VZR2 741 aa15.43■□□□□ 0.06
TRIM40-205ENST00000307859 GJD4Q96KN9 370 aaPredicted RBP15.43■□□□□ 0.06
TRIM40-205ENST00000307859 CT47B1P0C2W7 299 aaPredicted RBP15.42■□□□□ 0.06
TRIM40-205ENST00000307859 HOXC9P31274 260 aa15.42■□□□□ 0.06
TRIM40-205ENST00000307859 SULT6B1Q6IMI4 303 aa15.42■□□□□ 0.06
TRIM40-205ENST00000307859 AEBP1Q8IUX7 1158 aa15.42■□□□□ 0.06
TRIM40-205ENST00000307859 IGSF1Q8N6C5 1336 aa15.42■□□□□ 0.06
TRIM40-205ENST00000307859 BCL9LQ86UU0 1499 aa15.42■□□□□ 0.06
TRIM40-205ENST00000307859 CRYBG1Q9Y4K1 1723 aa15.41■□□□□ 0.06
TRIM40-205ENST00000307859 FOXO3O43524 673 aa15.41■□□□□ 0.06
TRIM40-205ENST00000307859 DEFB132Q7Z7B7 95 aa15.41■□□□□ 0.06
TRIM40-205ENST00000307859 USP19O94966 1318 aa15.4■□□□□ 0.06
TRIM40-205ENST00000307859 BCAR3O75815 825 aa15.4■□□□□ 0.06
TRIM40-205ENST00000307859 LMOD3Q0VAK6 560 aa15.4■□□□□ 0.06
TRIM40-205ENST00000307859 KCNH5Q8NCM2 988 aa15.4■□□□□ 0.06
TRIM40-205ENST00000307859 CCDC136Q96JN2 1154 aa15.4■□□□□ 0.06
TRIM40-205ENST00000307859 CRBNQ96SW2 442 aa15.4■□□□□ 0.06
TRIM40-205ENST00000307859 RGPD5Q99666 1765 aa15.4■□□□□ 0.06
TRIM40-205ENST00000307859 RARSP54136 660 aaKnown RBP15.39■□□□□ 0.05
TRIM40-205ENST00000307859 CALD1Q05682 793 aaKnown RBP15.39■□□□□ 0.05
TRIM40-205ENST00000307859 C20orf194Q5TEA3 1177 aa15.39■□□□□ 0.05
TRIM40-205ENST00000307859 CAMTA1Q9Y6Y1 1673 aa15.39■□□□□ 0.05
TRIM40-205ENST00000307859 COL22A1Q8NFW1 1626 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms