RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 IPO9Q96P70 1041 aaKnown RBP21.23■□□□□ 0.99
TVP23B-201ENST00000307767 SMC4Q9NTJ3 1288 aa21.23■□□□□ 0.99
TVP23B-201ENST00000307767 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
TVP23B-201ENST00000307767 PIK3R4Q99570 1358 aa21.22■□□□□ 0.99
TVP23B-201ENST00000307767 C8orf34Q49A92 452 aa21.22■□□□□ 0.99
TVP23B-201ENST00000307767 AEBP1Q8IUX7 1158 aa21.22■□□□□ 0.99
TVP23B-201ENST00000307767 RIMS1Q86UR5 1692 aaKnown RBP21.21■□□□□ 0.99
TVP23B-201ENST00000307767 DZIP1LQ8IYY4 767 aaKnown RBP21.21■□□□□ 0.99
TVP23B-201ENST00000307767 HSP90AB2PQ58FF8 381 aa21.2■□□□□ 0.99
TVP23B-201ENST00000307767 RGPD8O14715 1765 aaPredicted RBP21.2■□□□□ 0.98
TVP23B-201ENST00000307767 ANP32AP39687 249 aaKnown RBP21.2■□□□□ 0.98
TVP23B-201ENST00000307767 NOB1Q9ULX3 412 aaKnown RBP21.2■□□□□ 0.98
TVP23B-201ENST00000307767 TTC21AQ8NDW8 1320 aa21.2■□□□□ 0.98
TVP23B-201ENST00000307767 RGPD1P0DJD0 1748 aa21.18■□□□□ 0.98
TVP23B-201ENST00000307767 NEFMP07197 916 aa21.18■□□□□ 0.98
TVP23B-201ENST00000307767 RGS3P49796 1198 aa21.18■□□□□ 0.98
TVP23B-201ENST00000307767 ATF7IPQ6VMQ6 1270 aa21.18■□□□□ 0.98
TVP23B-201ENST00000307767 IFT57Q9NWB7 429 aa21.18■□□□□ 0.98
TVP23B-201ENST00000307767 NOP58Q9Y2X3 529 aaKnown RBP21.18■□□□□ 0.98
TVP23B-201ENST00000307767 ANKARQ7Z5J8 1434 aa21.18■□□□□ 0.98
TVP23B-201ENST00000307767 FAM83GA6ND36 823 aa21.17■□□□□ 0.98
TVP23B-201ENST00000307767 VAMP4O75379 141 aa21.17■□□□□ 0.98
TVP23B-201ENST00000307767 BRPF1P55201 1214 aaPredicted RBP21.17■□□□□ 0.98
TVP23B-201ENST00000307767 ALDH1L2Q3SY69 923 aa21.17■□□□□ 0.98
TVP23B-201ENST00000307767 TSPYL6Q8N831 410 aa21.17■□□□□ 0.98
TVP23B-201ENST00000307767 MBIPQ9NS73 344 aa21.17■□□□□ 0.98
TVP23B-201ENST00000307767 MAP3K19Q56UN5 1328 aa21.17■□□□□ 0.98
TVP23B-201ENST00000307767 SULT6B1Q6IMI4 303 aa21.16■□□□□ 0.98
TVP23B-201ENST00000307767 ADAMTSL3P82987 1691 aa21.16■□□□□ 0.98
TVP23B-201ENST00000307767 DLG5Q8TDM6 1919 aa21.16■□□□□ 0.98
TVP23B-201ENST00000307767 PIK3C2AO00443 1686 aa21.15■□□□□ 0.98
TVP23B-201ENST00000307767 FAM161AQ3B820 660 aa21.15■□□□□ 0.98
TVP23B-201ENST00000307767 LAS1LQ9Y4W2 734 aaKnown RBP21.15■□□□□ 0.98
TVP23B-201ENST00000307767 GNAI1P63096 354 aa21.14■□□□□ 0.98
TVP23B-201ENST00000307767 DCTN1Q14203 1278 aa21.14■□□□□ 0.98
TVP23B-201ENST00000307767 NPM2Q86SE8 214 aaKnown RBP21.14■□□□□ 0.98
TVP23B-201ENST00000307767 NGDNQ8NEJ9 315 aaKnown RBP21.14■□□□□ 0.98
TVP23B-201ENST00000307767 FMN2Q9NZ56 1722 aa21.14■□□□□ 0.97
TVP23B-201ENST00000307767 ZNF142P52746 1687 aaPredicted RBP21.13■□□□□ 0.97
TVP23B-201ENST00000307767 CALD1Q05682 793 aaKnown RBP21.13■□□□□ 0.97
TVP23B-201ENST00000307767 TMEM57Q8N5G2 664 aa21.13■□□□□ 0.97
TVP23B-201ENST00000307767 CFAP44Q96MT7 982 aa21.13■□□□□ 0.97
TVP23B-201ENST00000307767 FTSJ3Q8IY81 847 aaKnown RBP21.13■□□□□ 0.97
TVP23B-201ENST00000307767 ZNF428Q96B54 188 aa21.13■□□□□ 0.97
TVP23B-201ENST00000307767 SOX12O15370 315 aa21.12■□□□□ 0.97
TVP23B-201ENST00000307767 ANKLE2Q86XL3 938 aa21.12■□□□□ 0.97
TVP23B-201ENST00000307767 MRPL50Q8N5N7 158 aaKnown RBP21.12■□□□□ 0.97
TVP23B-201ENST00000307767 KIF16BQ96L93 1317 aa21.11■□□□□ 0.97
TVP23B-201ENST00000307767 CHD2O14647 1828 aaKnown RBP21.11■□□□□ 0.97
TVP23B-201ENST00000307767 LMOD3Q0VAK6 560 aa21.11■□□□□ 0.97
TVP23B-201ENST00000307767 C8orf58Q8NAV2 365 aa21.11■□□□□ 0.97
TVP23B-201ENST00000307767 MARF1Q9Y4F3 1742 aaKnown RBP21.11■□□□□ 0.97
TVP23B-201ENST00000307767 SBNO1A3KN83 1393 aa21.1■□□□□ 0.97
TVP23B-201ENST00000307767 ZBTB40Q9NUA8 1239 aa21.09■□□□□ 0.97
TVP23B-201ENST00000307767 DDX19BQ9UMR2 479 aa21.09■□□□□ 0.97
TVP23B-201ENST00000307767 PDZRN3Q9UPQ7 1066 aa21.09■□□□□ 0.97
TVP23B-201ENST00000307767 ARHGEF10O15013 1369 aa21.08■□□□□ 0.97
TVP23B-201ENST00000307767 ITPRIPQ8IWB1 547 aa21.08■□□□□ 0.96
TVP23B-201ENST00000307767 RBM33Q96EV2 1170 aaKnown RBP21.08■□□□□ 0.96
TVP23B-201ENST00000307767 RWDD1Q9H446 243 aaPredicted RBP21.08■□□□□ 0.96
TVP23B-201ENST00000307767 FLT4P35916 1363 aa21.08■□□□□ 0.96
TVP23B-201ENST00000307767 KDRP35968 1356 aa21.07■□□□□ 0.96
TVP23B-201ENST00000307767 ELL2O00472 640 aaPredicted RBP21.07■□□□□ 0.96
TVP23B-201ENST00000307767 IPO8O15397 1037 aaKnown RBP21.07■□□□□ 0.96
TVP23B-201ENST00000307767 ERICH6Q7L0X2 663 aa21.06■□□□□ 0.96
TVP23B-201ENST00000307767 HDAC1Q13547 482 aaPredicted RBP21.06■□□□□ 0.96
TVP23B-201ENST00000307767 ZBTB47Q9UFB7 747 aaPredicted RBP21.06■□□□□ 0.96
TVP23B-201ENST00000307767 USP54Q70EL1 1684 aa21.05■□□□□ 0.96
TVP23B-201ENST00000307767 CHL1O00533 1208 aa21.05■□□□□ 0.96
TVP23B-201ENST00000307767 NLRP6P59044 892 aa21.05■□□□□ 0.96
TVP23B-201ENST00000307767 MYT1Q01538 1121 aa21.05■□□□□ 0.96
TVP23B-201ENST00000307767 TWISTNBQ3B726 338 aaPredicted RBP21.05■□□□□ 0.96
TVP23B-201ENST00000307767 IGSF1Q8N6C5 1336 aa21.05■□□□□ 0.96
TVP23B-201ENST00000307767 ARHGAP45Q92619 1136 aa21.05■□□□□ 0.96
TVP23B-201ENST00000307767 EYA1Q99502 592 aa21.05■□□□□ 0.96
TVP23B-201ENST00000307767 CRB1P82279 1406 aa21.04■□□□□ 0.96
TVP23B-201ENST00000307767 MCM10Q7L590 875 aa21.04■□□□□ 0.96
TVP23B-201ENST00000307767 NUTM2GQ5VZR2 741 aa21.03■□□□□ 0.96
TVP23B-201ENST00000307767 FOXO3O43524 673 aa21.03■□□□□ 0.96
TVP23B-201ENST00000307767 USP19O94966 1318 aa21.03■□□□□ 0.96
TVP23B-201ENST00000307767 NWD1Q149M9 1564 aa21.02■□□□□ 0.96
TVP23B-201ENST00000307767 MTHFSDQ2M296 383 aaKnown RBP21.02■□□□□ 0.96
TVP23B-201ENST00000307767 ZBTB7BO15156 539 aaPredicted RBP21.01■□□□□ 0.95
TVP23B-201ENST00000307767 KRT24Q2M2I5 525 aa21.01■□□□□ 0.95
TVP23B-201ENST00000307767 PHF8Q9UPP1 1060 aa21.01■□□□□ 0.95
TVP23B-201ENST00000307767 ABCC4O15439 1325 aa21.01■□□□□ 0.95
TVP23B-201ENST00000307767 SEC24BO95487 1268 aa21■□□□□ 0.95
TVP23B-201ENST00000307767 HOXC9P31274 260 aa21■□□□□ 0.95
TVP23B-201ENST00000307767 AMPHP49418 695 aa21■□□□□ 0.95
TVP23B-201ENST00000307767 SMC5Q8IY18 1101 aa21■□□□□ 0.95
TVP23B-201ENST00000307767 ADGRL3Q9HAR2 1447 aa21■□□□□ 0.95
TVP23B-201ENST00000307767 SETD1BQ9UPS6 1966 aaKnown RBP21■□□□□ 0.95
TVP23B-201ENST00000307767 NPHP4O75161 1426 aaPredicted RBP20.99■□□□□ 0.95
TVP23B-201ENST00000307767 KIF24Q5T7B8 1368 aa20.99■□□□□ 0.95
TVP23B-201ENST00000307767 ABTB2Q8N961 1025 aa20.99■□□□□ 0.95
TVP23B-201ENST00000307767 KIAA0232Q92628 1395 aa20.97■□□□□ 0.95
TVP23B-201ENST00000307767 VIRMAQ69YN4 1812 aaKnown RBP20.95■□□□□ 0.94
TVP23B-201ENST00000307767 RGS12O14924 1447 aa20.95■□□□□ 0.94
TVP23B-201ENST00000307767 NFAT5O94916 1531 aa20.93■□□□□ 0.94
TVP23B-201ENST00000307767 MIS18AQ9NYP9 233 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms