RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 EMILIN1Q9Y6C2 1016 aa16.06■□□□□ 0.16
DDX54-201ENST00000306014 ZMYM4Q5VZL5 1548 aa16.06■□□□□ 0.16
DDX54-201ENST00000306014 C1orf141Q5JVX7 400 aa16.05■□□□□ 0.16
DDX54-201ENST00000306014 POLR3AO14802 1390 aaPredicted RBP16.05■□□□□ 0.16
DDX54-201ENST00000306014 RTEL1-TNFRSF6BF6WH68 1400 aa16.05■□□□□ 0.16
DDX54-201ENST00000306014 ZSCAN30Q86W11 494 aa16.05■□□□□ 0.16
DDX54-201ENST00000306014 MIS18AQ9NYP9 233 aa16.05■□□□□ 0.16
DDX54-201ENST00000306014 CHD1O14646 1710 aa16.05■□□□□ 0.16
DDX54-201ENST00000306014 SHANK2Q9UPX8 1470 aa16.05■□□□□ 0.16
DDX54-201ENST00000306014 NLRP6P59044 892 aa16.05■□□□□ 0.16
DDX54-201ENST00000306014 IDI1Q13907 227 aa16.05■□□□□ 0.16
DDX54-201ENST00000306014 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
DDX54-201ENST00000306014 BLMP54132 1417 aaPredicted RBP16.05■□□□□ 0.16
DDX54-201ENST00000306014 KIF3AQ9Y496 699 aa16.05■□□□□ 0.16
DDX54-201ENST00000306014 SYCE3A1L190 88 aa16.04■□□□□ 0.16
DDX54-201ENST00000306014 CCT4P50991 539 aaKnown RBP16.04■□□□□ 0.16
DDX54-201ENST00000306014 HSP90AB4PQ58FF6 505 aa16.04■□□□□ 0.16
DDX54-201ENST00000306014 MCM10Q7L590 875 aa16.04■□□□□ 0.16
DDX54-201ENST00000306014 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.04■□□□□ 0.16
DDX54-201ENST00000306014 CEBPAP49715 358 aaPredicted RBP16.04■□□□□ 0.16
DDX54-201ENST00000306014 G3BP1Q13283 466 aaKnown RBP eCLIP16.04■□□□□ 0.162e-6■■■■□ 22.1
DDX54-201ENST00000306014 IFT57Q9NWB7 429 aa16.04■□□□□ 0.16
DDX54-201ENST00000306014 MAP4K4O95819 1239 aaPredicted RBP16.03■□□□□ 0.16
DDX54-201ENST00000306014 SLC26A8Q96RN1 970 aa16.03■□□□□ 0.16
DDX54-201ENST00000306014 TPM4P67936 248 aa16.03■□□□□ 0.16
DDX54-201ENST00000306014 NUCB1Q02818 461 aa16.03■□□□□ 0.16
DDX54-201ENST00000306014 CNTROBQ8N137 903 aa16.03■□□□□ 0.16
DDX54-201ENST00000306014 IL1RAPL2Q9NP60 686 aa16.03■□□□□ 0.16
DDX54-201ENST00000306014 RNF20Q5VTR2 975 aa16.03■□□□□ 0.16
DDX54-201ENST00000306014 NME9Q86XW9 330 aa16.02■□□□□ 0.16
DDX54-201ENST00000306014 CLASRPQ8N2M8 674 aaKnown RBP16.02■□□□□ 0.16
DDX54-201ENST00000306014 GAS2L2Q8NHY3 880 aa16.02■□□□□ 0.16
DDX54-201ENST00000306014 UPF3BQ9BZI7 483 aaKnown RBP16.02■□□□□ 0.16
DDX54-201ENST00000306014 ANKLE2Q86XL3 938 aa16.02■□□□□ 0.16
DDX54-201ENST00000306014 DUOX2Q9NRD8 1548 aa16.02■□□□□ 0.15
DDX54-201ENST00000306014 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.15
DDX54-201ENST00000306014 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
DDX54-201ENST00000306014 KDM5BQ9UGL1 1544 aa16.01■□□□□ 0.15
DDX54-201ENST00000306014 ABCC10Q5T3U5 1492 aa16.01■□□□□ 0.15
DDX54-201ENST00000306014 RRP9O43818 475 aaKnown RBP16.01■□□□□ 0.15
DDX54-201ENST00000306014 FOSBP53539 338 aa16.01■□□□□ 0.15
DDX54-201ENST00000306014 BCL11BQ9C0K0 894 aaPredicted RBP16.01■□□□□ 0.15
DDX54-201ENST00000306014 BAG4O95429 457 aaKnown RBP16■□□□□ 0.15
DDX54-201ENST00000306014 AIMP1Q12904 312 aaKnown RBP16■□□□□ 0.15
DDX54-201ENST00000306014 TAF7LQ5H9L4 462 aa16■□□□□ 0.15
DDX54-201ENST00000306014 HDGFL1Q5TGJ6 251 aa16■□□□□ 0.15
DDX54-201ENST00000306014 EIF2AK4Q9P2K8 1649 aaKnown RBP16■□□□□ 0.15
DDX54-201ENST00000306014 WDR33Q9C0J8 1336 aaKnown RBP16■□□□□ 0.15
DDX54-201ENST00000306014 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
DDX54-201ENST00000306014 NSD2O96028 1365 aa16■□□□□ 0.15
DDX54-201ENST00000306014 FAM83GA6ND36 823 aa15.99■□□□□ 0.15
DDX54-201ENST00000306014 MAP7D2Q96T17 732 aa15.99■□□□□ 0.15
DDX54-201ENST00000306014 FYB1O15117 783 aa15.99■□□□□ 0.15
DDX54-201ENST00000306014 SASS6Q6UVJ0 657 aa15.99■□□□□ 0.15
DDX54-201ENST00000306014 FBXW7Q969H0 707 aa15.99■□□□□ 0.15
DDX54-201ENST00000306014 F6X3S4 739 aa15.99■□□□□ 0.15
DDX54-201ENST00000306014 MBIPQ9NS73 344 aa15.99■□□□□ 0.15
DDX54-201ENST00000306014 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
DDX54-201ENST00000306014 NUDT16Q96DE0 195 aaKnown RBP15.98■□□□□ 0.15
DDX54-201ENST00000306014 IL16Q14005 1332 aa15.98■□□□□ 0.15
DDX54-201ENST00000306014 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
DDX54-201ENST00000306014 ABCA8O94911 1581 aa15.98■□□□□ 0.15
DDX54-201ENST00000306014 KDM5CP41229 1560 aa15.98■□□□□ 0.15
DDX54-201ENST00000306014 SPC24Q8NBT2 197 aa15.98■□□□□ 0.15
DDX54-201ENST00000306014 UQCRHLA0A096LP55 91 aa15.97■□□□□ 0.15
DDX54-201ENST00000306014 UQCRHP07919 91 aa15.97■□□□□ 0.15
DDX54-201ENST00000306014 DDX58O95786 925 aaKnown RBP15.97■□□□□ 0.15
DDX54-201ENST00000306014 PSME1Q06323 249 aa15.97■□□□□ 0.15
DDX54-201ENST00000306014 SMC5Q8IY18 1101 aa15.97■□□□□ 0.15
DDX54-201ENST00000306014 INSRP06213 1382 aa15.96■□□□□ 0.15
DDX54-201ENST00000306014 ATF3P18847 181 aa15.96■□□□□ 0.15
DDX54-201ENST00000306014 CLCN1P35523 988 aa15.96■□□□□ 0.15
DDX54-201ENST00000306014 FSD1Q9BTV5 496 aa15.96■□□□□ 0.15
DDX54-201ENST00000306014 XPCQ01831 940 aaPredicted RBP15.96■□□□□ 0.15
DDX54-201ENST00000306014 ZBTB40Q9NUA8 1239 aa15.96■□□□□ 0.15
DDX54-201ENST00000306014 UHRF1BP1LA0JNW5 1464 aa15.96■□□□□ 0.14
DDX54-201ENST00000306014 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.14
DDX54-201ENST00000306014 SRGAP3O43295 1099 aa15.95■□□□□ 0.14
DDX54-201ENST00000306014 LETM1O95202 739 aaPredicted RBP15.95■□□□□ 0.14
DDX54-201ENST00000306014 KLHL40Q2TBA0 621 aa15.95■□□□□ 0.14
DDX54-201ENST00000306014 NUTM1Q86Y26 1132 aa15.95■□□□□ 0.14
DDX54-201ENST00000306014 ANKRD36BQ8N2N9 1353 aa15.95■□□□□ 0.14
DDX54-201ENST00000306014 MX1P20591 662 aa15.95■□□□□ 0.14
DDX54-201ENST00000306014 MTERF4Q7Z6M4 381 aaKnown RBP15.95■□□□□ 0.14
DDX54-201ENST00000306014 TRIM5Q9C035 493 aa15.95■□□□□ 0.14
DDX54-201ENST00000306014 SRCIN1Q9C0H9 1055 aa15.95■□□□□ 0.14
DDX54-201ENST00000306014 CWC27Q6UX04 472 aaKnown RBP15.95■□□□□ 0.14
DDX54-201ENST00000306014 NPC1L1Q9UHC9 1359 aa15.94■□□□□ 0.14
DDX54-201ENST00000306014 ABTB2Q8N961 1025 aa15.94■□□□□ 0.14
DDX54-201ENST00000306014 SNX21Q969T3 373 aa15.94■□□□□ 0.14
DDX54-201ENST00000306014 RBM27Q9P2N5 1060 aaKnown RBP15.94■□□□□ 0.14
DDX54-201ENST00000306014 TSHZ3Q63HK5 1081 aa15.94■□□□□ 0.14
DDX54-201ENST00000306014 TTC22Q5TAA0 569 aa15.94■□□□□ 0.14
DDX54-201ENST00000306014 RIC3Q7Z5B4 369 aa15.93■□□□□ 0.14
DDX54-201ENST00000306014 GDPD2Q9HCC8 539 aa15.93■□□□□ 0.14
DDX54-201ENST00000306014 RRAGDQ9NQL2 400 aaPredicted RBP15.93■□□□□ 0.14
DDX54-201ENST00000306014 PSMA5P28066 241 aa15.93■□□□□ 0.14
DDX54-201ENST00000306014 TOMM22Q9NS69 142 aa15.93■□□□□ 0.14
DDX54-201ENST00000306014 CYP46A1Q9Y6A2 500 aa15.93■□□□□ 0.14
DDX54-201ENST00000306014 HMGN5P82970 282 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms