RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 MCM10Q7L590 875 aa18.66■□□□□ 0.58
SMG8-201ENST00000300917 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
SMG8-201ENST00000300917 AMPHP49418 695 aa18.66■□□□□ 0.58
SMG8-201ENST00000300917 XPCQ01831 940 aaPredicted RBP18.66■□□□□ 0.58
SMG8-201ENST00000300917 ANKLE2Q86XL3 938 aa18.66■□□□□ 0.58
SMG8-201ENST00000300917 USP6P35125 1406 aa18.66■□□□□ 0.58
SMG8-201ENST00000300917 ADGRB2O60241 1585 aa18.65■□□□□ 0.58
SMG8-201ENST00000300917 MS4A1P11836 297 aa18.65■□□□□ 0.58
SMG8-201ENST00000300917 KRT24Q2M2I5 525 aa18.65■□□□□ 0.58
SMG8-201ENST00000300917 MAP3K19Q56UN5 1328 aa18.65■□□□□ 0.58
SMG8-201ENST00000300917 MBIPQ9NS73 344 aa18.65■□□□□ 0.58
SMG8-201ENST00000300917 NOP58Q9Y2X3 529 aaKnown RBP18.65■□□□□ 0.58
SMG8-201ENST00000300917 MIS18AQ9NYP9 233 aa18.64■□□□□ 0.58
SMG8-201ENST00000300917 FOXO3O43524 673 aa18.64■□□□□ 0.57
SMG8-201ENST00000300917 MVPQ14764 893 aaKnown RBP18.64■□□□□ 0.57
SMG8-201ENST00000300917 TMEM57Q8N5G2 664 aa18.64■□□□□ 0.57
SMG8-201ENST00000300917 ABTB2Q8N961 1025 aa18.64■□□□□ 0.57
SMG8-201ENST00000300917 LMOD2Q6P5Q4 547 aa18.63■□□□□ 0.57
SMG8-201ENST00000300917 IPO9Q96P70 1041 aaKnown RBP18.63■□□□□ 0.57
SMG8-201ENST00000300917 NBR1Q14596 966 aa18.62■□□□□ 0.57
SMG8-201ENST00000300917 ATF7IPQ6VMQ6 1270 aa18.62■□□□□ 0.57
SMG8-201ENST00000300917 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
SMG8-201ENST00000300917 AATKQ6ZMQ8 1374 aa18.62■□□□□ 0.57
SMG8-201ENST00000300917 C8orf58Q8NAV2 365 aa18.62■□□□□ 0.57
SMG8-201ENST00000300917 ARHGAP23Q9P227 1491 aa18.61■□□□□ 0.57
SMG8-201ENST00000300917 ESCO1Q5FWF5 840 aa18.61■□□□□ 0.57
SMG8-201ENST00000300917 CDK12Q9NYV4 1490 aaPredicted RBP18.6■□□□□ 0.57
SMG8-201ENST00000300917 KNDC1Q76NI1 1749 aa18.6■□□□□ 0.57
SMG8-201ENST00000300917 IL16Q14005 1332 aa18.6■□□□□ 0.57
SMG8-201ENST00000300917 SLIT1O75093 1534 aa18.6■□□□□ 0.57
SMG8-201ENST00000300917 SLC4A3P48751 1232 aa18.6■□□□□ 0.57
SMG8-201ENST00000300917 C1orf115Q9H7X2 142 aa18.59■□□□□ 0.57
SMG8-201ENST00000300917 GNAI1P63096 354 aa18.59■□□□□ 0.57
SMG8-201ENST00000300917 TWISTNBQ3B726 338 aaPredicted RBP18.59■□□□□ 0.57
SMG8-201ENST00000300917 USHBP1Q8N6Y0 703 aa18.59■□□□□ 0.57
SMG8-201ENST00000300917 RIMS1Q86UR5 1692 aaKnown RBP18.58■□□□□ 0.57
SMG8-201ENST00000300917 VAMP4O75379 141 aa18.58■□□□□ 0.56
SMG8-201ENST00000300917 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
SMG8-201ENST00000300917 ITSN1Q15811 1721 aa18.57■□□□□ 0.56
SMG8-201ENST00000300917 C8orf34Q49A92 452 aa18.57■□□□□ 0.56
SMG8-201ENST00000300917 FAM161AQ3B820 660 aa18.57■□□□□ 0.56
SMG8-201ENST00000300917 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
SMG8-201ENST00000300917 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
SMG8-201ENST00000300917 NCBP3Q53F19 620 aaKnown RBP18.56■□□□□ 0.56
SMG8-201ENST00000300917 CT47B1P0C2W7 299 aaPredicted RBP18.56■□□□□ 0.56
SMG8-201ENST00000300917 PHF8Q9UPP1 1060 aa18.56■□□□□ 0.56
SMG8-201ENST00000300917 MON2Q7Z3U7 1717 aa18.56■□□□□ 0.56
SMG8-201ENST00000300917 EYA1Q99502 592 aa18.55■□□□□ 0.56
SMG8-201ENST00000300917 DIP2AQ14689 1571 aa18.55■□□□□ 0.56
SMG8-201ENST00000300917 RWDD1Q9H446 243 aaPredicted RBP18.55■□□□□ 0.56
SMG8-201ENST00000300917 IFT57Q9NWB7 429 aa18.55■□□□□ 0.56
SMG8-201ENST00000300917 RGPD8O14715 1765 aaPredicted RBP18.55■□□□□ 0.56
SMG8-201ENST00000300917 CEP170BQ9Y4F5 1589 aaPredicted RBP18.54■□□□□ 0.56
SMG8-201ENST00000300917 IPO8O15397 1037 aaKnown RBP18.54■□□□□ 0.56
SMG8-201ENST00000300917 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
SMG8-201ENST00000300917 PSME1Q06323 249 aa18.54■□□□□ 0.56
SMG8-201ENST00000300917 CFAP44Q96MT7 982 aa18.54■□□□□ 0.56
SMG8-201ENST00000300917 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
SMG8-201ENST00000300917 MTHFSDQ2M296 383 aaKnown RBP18.54■□□□□ 0.56
SMG8-201ENST00000300917 ORAI2Q96SN7 254 aa18.54■□□□□ 0.56
SMG8-201ENST00000300917 KIF16BQ96L93 1317 aa18.53■□□□□ 0.56
SMG8-201ENST00000300917 PTCH1Q13635 1447 aa18.53■□□□□ 0.56
SMG8-201ENST00000300917 DDX19BQ9UMR2 479 aa18.53■□□□□ 0.56
SMG8-201ENST00000300917 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
SMG8-201ENST00000300917 AKAP12Q02952 1782 aa18.52■□□□□ 0.56
SMG8-201ENST00000300917 NECTIN2Q92692 538 aa18.52■□□□□ 0.56
SMG8-201ENST00000300917 SEC24BO95487 1268 aa18.51■□□□□ 0.55
SMG8-201ENST00000300917 MRPL50Q8N5N7 158 aaKnown RBP18.51■□□□□ 0.55
SMG8-201ENST00000300917 ZNF853P0CG23 659 aa18.51■□□□□ 0.55
SMG8-201ENST00000300917 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
SMG8-201ENST00000300917 SSH2Q76I76 1423 aa18.5■□□□□ 0.55
SMG8-201ENST00000300917 ALDH1L2Q3SY69 923 aa18.49■□□□□ 0.55
SMG8-201ENST00000300917 FLT4P35916 1363 aa18.49■□□□□ 0.55
SMG8-201ENST00000300917 HOXC9P31274 260 aa18.48■□□□□ 0.55
SMG8-201ENST00000300917 USP31Q70CQ4 1352 aa18.48■□□□□ 0.55
SMG8-201ENST00000300917 PROSER2Q86WR7 435 aaPredicted RBP18.48■□□□□ 0.55
SMG8-201ENST00000300917 ZBTB40Q9NUA8 1239 aa18.47■□□□□ 0.55
SMG8-201ENST00000300917 PEAK1Q9H792 1746 aa18.47■□□□□ 0.55
SMG8-201ENST00000300917 SBNO1A3KN83 1393 aa18.47■□□□□ 0.55
SMG8-201ENST00000300917 TSPYL4Q9UJ04 414 aa18.47■□□□□ 0.55
SMG8-201ENST00000300917 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
SMG8-201ENST00000300917 LNPKQ9C0E8 428 aa18.46■□□□□ 0.55
SMG8-201ENST00000300917 TOPAZ1Q8N9V7 1692 aa18.45■□□□□ 0.54
SMG8-201ENST00000300917 HSPA2P54652 639 aa18.45■□□□□ 0.54
SMG8-201ENST00000300917 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
SMG8-201ENST00000300917 SETD1BQ9UPS6 1966 aaKnown RBP18.44■□□□□ 0.54
SMG8-201ENST00000300917 NRKQ7Z2Y5 1582 aa18.44■□□□□ 0.54
SMG8-201ENST00000300917 DAXXQ9UER7 740 aaPredicted RBP18.43■□□□□ 0.54
SMG8-201ENST00000300917 CHL1O00533 1208 aa18.43■□□□□ 0.54
SMG8-201ENST00000300917 SLC4A10Q6U841 1118 aa18.43■□□□□ 0.54
SMG8-201ENST00000300917 APBB1O00213 710 aa18.42■□□□□ 0.54
SMG8-201ENST00000300917 SLC4A2P04920 1241 aa18.42■□□□□ 0.54
SMG8-201ENST00000300917 DLG5Q8TDM6 1919 aa18.41■□□□□ 0.54
SMG8-201ENST00000300917 ZBTB7BO15156 539 aaPredicted RBP18.41■□□□□ 0.54
SMG8-201ENST00000300917 XRN1Q8IZH2 1706 aaKnown RBP18.41■□□□□ 0.54
SMG8-201ENST00000300917 F6X3S4 739 aa18.41■□□□□ 0.54
SMG8-201ENST00000300917 NPHP4O75161 1426 aaPredicted RBP18.41■□□□□ 0.54
SMG8-201ENST00000300917 IGSF1Q8N6C5 1336 aa18.4■□□□□ 0.54
SMG8-201ENST00000300917 PIK3R4Q99570 1358 aa18.4■□□□□ 0.54
SMG8-201ENST00000300917 AAMPQ13685 434 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms