RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 ABCC1P33527 1531 aa12.56□□□□□ -0.4
GABRB3-201ENST00000299267 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
GABRB3-201ENST00000299267 FOXD4L6Q3SYB3 417 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-201ENST00000299267 FOXD4L3Q6VB84 417 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-201ENST00000299267 ARHGEF5Q12774 1597 aa12.55□□□□□ -0.4
GABRB3-201ENST00000299267 MAP3K19Q56UN5 1328 aa12.55□□□□□ -0.4
GABRB3-201ENST00000299267 NPHP3Q7Z494 1330 aa12.55□□□□□ -0.4
GABRB3-201ENST00000299267 PLCB2Q00722 1185 aa12.55□□□□□ -0.4
GABRB3-201ENST00000299267 SLC39A6Q13433 755 aa12.55□□□□□ -0.4
GABRB3-201ENST00000299267 SRCIN1Q9C0H9 1055 aa12.55□□□□□ -0.4
GABRB3-201ENST00000299267 GNAI3P08754 354 aa12.55□□□□□ -0.4
GABRB3-201ENST00000299267 BICDL1Q6ZP65 573 aa12.55□□□□□ -0.4
GABRB3-201ENST00000299267 METP08581 1390 aa12.55□□□□□ -0.4
GABRB3-201ENST00000299267 MVPQ14764 893 aaKnown RBP12.54□□□□□ -0.4
GABRB3-201ENST00000299267 ANO2Q9NQ90 1003 aa12.54□□□□□ -0.4
GABRB3-201ENST00000299267 DIAPH3Q9NSV4 1193 aa12.54□□□□□ -0.4
GABRB3-201ENST00000299267 LRPPRCP42704 1394 aaKnown RBP12.54□□□□□ -0.4
GABRB3-201ENST00000299267 PIP4K2AP48426 406 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-201ENST00000299267 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
GABRB3-201ENST00000299267 GZF1Q9H116 711 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-201ENST00000299267 EYA1Q99502 592 aa12.53□□□□□ -0.4
GABRB3-201ENST00000299267 IL1RAPL2Q9NP60 686 aa12.53□□□□□ -0.4
GABRB3-201ENST00000299267 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-201ENST00000299267 PARD3Q8TEW0 1356 aa12.53□□□□□ -0.4
GABRB3-201ENST00000299267 GNAI2P04899 355 aa12.53□□□□□ -0.4
GABRB3-201ENST00000299267 IPO9Q96P70 1041 aaKnown RBP12.53□□□□□ -0.4
GABRB3-201ENST00000299267 PLA2R1Q13018 1463 aa12.53□□□□□ -0.4
GABRB3-201ENST00000299267 MLH3Q9UHC1 1453 aa12.53□□□□□ -0.4
GABRB3-201ENST00000299267 VPS37DQ86XT2 251 aa12.52□□□□□ -0.4
GABRB3-201ENST00000299267 JARID2Q92833 1246 aaPredicted RBP12.52□□□□□ -0.4
GABRB3-201ENST00000299267 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.4
GABRB3-201ENST00000299267 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.41
GABRB3-201ENST00000299267 TMOD3Q9NYL9 352 aa12.52□□□□□ -0.41
GABRB3-201ENST00000299267 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
GABRB3-201ENST00000299267 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.41
GABRB3-201ENST00000299267 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.41
GABRB3-201ENST00000299267 C8orf37Q96NL8 207 aa12.52□□□□□ -0.41
GABRB3-201ENST00000299267 IFT57Q9NWB7 429 aa12.52□□□□□ -0.41
GABRB3-201ENST00000299267 EXOC5O00471 708 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 APPP05067 770 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 FBXW7Q969H0 707 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 SRGAP3O43295 1099 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 ANP32EQ9BTT0 268 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 TNNQ9UQP3 1299 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 TTC21AQ8NDW8 1320 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 PREX2Q70Z35 1606 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 MAP4K4O95819 1239 aaPredicted RBP12.51□□□□□ -0.41
GABRB3-201ENST00000299267 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 NSD2O96028 1365 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 TOM1O60784 492 aa12.51□□□□□ -0.41
GABRB3-201ENST00000299267 CLASRPQ8N2M8 674 aaKnown RBP12.51□□□□□ -0.41
GABRB3-201ENST00000299267 PPP1R1BQ9UD71 204 aaPredicted RBP12.51□□□□□ -0.41
GABRB3-201ENST00000299267 NINLQ9Y2I6 1382 aa12.5□□□□□ -0.41
GABRB3-201ENST00000299267 TRIM27P14373 513 aa12.5□□□□□ -0.41
GABRB3-201ENST00000299267 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
GABRB3-201ENST00000299267 GOLGA6L4A6NEF3 574 aa12.5□□□□□ -0.41
GABRB3-201ENST00000299267 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
GABRB3-201ENST00000299267 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
GABRB3-201ENST00000299267 TSPYL6Q8N831 410 aa12.49□□□□□ -0.41
GABRB3-201ENST00000299267 ZBTB3Q9H5J0 574 aa12.49□□□□□ -0.41
GABRB3-201ENST00000299267 ADCY10Q96PN6 1610 aa12.49□□□□□ -0.41
GABRB3-201ENST00000299267 CCT4P50991 539 aaKnown RBP12.49□□□□□ -0.41
GABRB3-201ENST00000299267 ZRSR1Q15695 479 aaKnown RBP12.49□□□□□ -0.41
GABRB3-201ENST00000299267 IFNL2Q8IZJ0 200 aa12.49□□□□□ -0.41
GABRB3-201ENST00000299267 DNAJC2Q99543 621 aaKnown RBP12.48□□□□□ -0.41
GABRB3-201ENST00000299267 COL17A1Q9UMD9 1497 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-201ENST00000299267 PRDM15P57071 1507 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-201ENST00000299267 ATP5J2-PTCD1G3V325 749 aa12.48□□□□□ -0.41
GABRB3-201ENST00000299267 SMARCA5O60264 1052 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-201ENST00000299267 SPATA31E1Q6ZUB1 1445 aa12.48□□□□□ -0.41
GABRB3-201ENST00000299267 GCC2Q8IWJ2 1684 aa12.47□□□□□ -0.41
GABRB3-201ENST00000299267 HOXC9P31274 260 aa12.47□□□□□ -0.41
GABRB3-201ENST00000299267 CT47B1P0C2W7 299 aaPredicted RBP12.47□□□□□ -0.41
GABRB3-201ENST00000299267 GPTP24298 496 aa12.47□□□□□ -0.41
GABRB3-201ENST00000299267 GNL2Q13823 731 aaKnown RBP12.47□□□□□ -0.41
GABRB3-201ENST00000299267 SLAIN2Q9P270 581 aa12.47□□□□□ -0.41
GABRB3-201ENST00000299267 NFATC2IPQ8NCF5 419 aa12.47□□□□□ -0.41
GABRB3-201ENST00000299267 LMTK3Q96Q04 1460 aa12.47□□□□□ -0.41
GABRB3-201ENST00000299267 WASHC4Q2M389 1173 aa12.47□□□□□ -0.41
GABRB3-201ENST00000299267 HSP90AB4PQ58FF6 505 aa12.47□□□□□ -0.41
GABRB3-201ENST00000299267 FLIIQ13045 1269 aa12.46□□□□□ -0.41
GABRB3-201ENST00000299267 MYD88Q99836 296 aa12.46□□□□□ -0.41
GABRB3-201ENST00000299267 ADGBQ8N7X0 1667 aa12.46□□□□□ -0.41
GABRB3-201ENST00000299267 PI4KAP2A4QPH2 592 aa12.46□□□□□ -0.41
GABRB3-201ENST00000299267 PI4KAP1Q8N8J0 262 aa12.46□□□□□ -0.41
GABRB3-201ENST00000299267 CNNM1Q9NRU3 951 aa12.46□□□□□ -0.41
GABRB3-201ENST00000299267 CLASP1Q7Z460 1538 aa12.46□□□□□ -0.42
GABRB3-201ENST00000299267 ABCC11Q96J66 1382 aa12.46□□□□□ -0.42
GABRB3-201ENST00000299267 PUS7Q96PZ0 661 aaKnown RBP12.46□□□□□ -0.42
GABRB3-201ENST00000299267 BTG4Q9NY30 223 aa12.45□□□□□ -0.42
GABRB3-201ENST00000299267 STARD3NLO95772 234 aa12.45□□□□□ -0.42
GABRB3-201ENST00000299267 PTPRTO14522 1441 aa12.45□□□□□ -0.42
GABRB3-201ENST00000299267 ST18O60284 1047 aa12.45□□□□□ -0.42
GABRB3-201ENST00000299267 ZCRB1Q8TBF4 217 aaKnown RBP12.45□□□□□ -0.42
GABRB3-201ENST00000299267 NKTRP30414 1462 aaKnown RBP12.45□□□□□ -0.42
GABRB3-201ENST00000299267 FSD1Q9BTV5 496 aa12.44□□□□□ -0.42
GABRB3-201ENST00000299267 FLT4P35916 1363 aa12.44□□□□□ -0.42
GABRB3-201ENST00000299267 EIF2AK4Q9P2K8 1649 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms