RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
TNFRSF21-201ENST00000296861 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
TNFRSF21-201ENST00000296861 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
TNFRSF21-201ENST00000296861 ST18O60284 1047 aa16.37■□□□□ 0.21
TNFRSF21-201ENST00000296861 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
TNFRSF21-201ENST00000296861 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
TNFRSF21-201ENST00000296861 CHMP3Q9Y3E7 222 aa16.37■□□□□ 0.21
TNFRSF21-201ENST00000296861 NFE2L2Q16236 605 aa16.37■□□□□ 0.21
TNFRSF21-201ENST00000296861 VAMP4O75379 141 aa16.37■□□□□ 0.21
TNFRSF21-201ENST00000296861 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 FCHSD2O94868 740 aa16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 BAG4O95429 457 aaKnown RBP16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 RTF1Q92541 710 aaKnown RBP16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 GCC1Q96CN9 775 aa16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 POLKQ9UBT6 870 aa16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 ZBTB7BO15156 539 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 BMP2KLQ5H9B9 411 aa16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 API5Q9BZZ5 524 aaKnown RBP16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 XPCQ01831 940 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 SKOR2Q2VWA4 1001 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 TRPM2O94759 1503 aa16.36■□□□□ 0.21
TNFRSF21-201ENST00000296861 SYCE3A1L190 88 aa16.35■□□□□ 0.21
TNFRSF21-201ENST00000296861 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
TNFRSF21-201ENST00000296861 PLEKHF1Q96S99 279 aa16.34■□□□□ 0.21
TNFRSF21-201ENST00000296861 MEIS3Q99687 375 aa16.34■□□□□ 0.21
TNFRSF21-201ENST00000296861 ANKRD36BQ8N2N9 1353 aa16.34■□□□□ 0.21
TNFRSF21-201ENST00000296861 DDX54Q8TDD1 881 aaKnown RBP16.34■□□□□ 0.21
TNFRSF21-201ENST00000296861 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.21
TNFRSF21-201ENST00000296861 INTS3Q68E01 1043 aaKnown RBP16.33■□□□□ 0.21
TNFRSF21-201ENST00000296861 CT47B1P0C2W7 299 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF21-201ENST00000296861 MRPL50Q8N5N7 158 aaKnown RBP16.33■□□□□ 0.2
TNFRSF21-201ENST00000296861 IL1RAPL2Q9NP60 686 aa16.33■□□□□ 0.2
TNFRSF21-201ENST00000296861 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF21-201ENST00000296861 FKBP5Q13451 457 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF21-201ENST00000296861 AEBP2Q6ZN18 517 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF21-201ENST00000296861 ZMYND15Q9H091 742 aa16.33■□□□□ 0.2
TNFRSF21-201ENST00000296861 FSD2A1L4K1 749 aa16.32■□□□□ 0.2
TNFRSF21-201ENST00000296861 SYNMO15061 1565 aa16.32■□□□□ 0.2
TNFRSF21-201ENST00000296861 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
TNFRSF21-201ENST00000296861 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
TNFRSF21-201ENST00000296861 RAB3GAP1Q15042 981 aa16.32■□□□□ 0.2
TNFRSF21-201ENST00000296861 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
TNFRSF21-201ENST00000296861 SDSP20132 328 aa16.31■□□□□ 0.2
TNFRSF21-201ENST00000296861 SLC52A1Q9NWF4 448 aa16.31■□□□□ 0.2
TNFRSF21-201ENST00000296861 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
TNFRSF21-201ENST00000296861 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF21-201ENST00000296861 ARAP3Q8WWN8 1544 aa16.3■□□□□ 0.2
TNFRSF21-201ENST00000296861 PLEKHM2Q8IWE5 1019 aa16.3■□□□□ 0.2
TNFRSF21-201ENST00000296861 FOXO3O43524 673 aa16.29■□□□□ 0.2
TNFRSF21-201ENST00000296861 RBM25P49756 843 aaKnown RBP16.29■□□□□ 0.2
TNFRSF21-201ENST00000296861 RABEP1Q15276 862 aa16.29■□□□□ 0.2
TNFRSF21-201ENST00000296861 ALDH1L2Q3SY69 923 aa16.29■□□□□ 0.2
TNFRSF21-201ENST00000296861 LMOD2Q6P5Q4 547 aa16.29■□□□□ 0.2
TNFRSF21-201ENST00000296861 SPHKAPQ2M3C7 1700 aa16.29■□□□□ 0.2
TNFRSF21-201ENST00000296861 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
TNFRSF21-201ENST00000296861 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
TNFRSF21-201ENST00000296861 RRP9O43818 475 aaKnown RBP16.28■□□□□ 0.2
TNFRSF21-201ENST00000296861 KDM5AP29375 1690 aaKnown RBP16.28■□□□□ 0.2
TNFRSF21-201ENST00000296861 NUCB2P80303 420 aa16.28■□□□□ 0.2
TNFRSF21-201ENST00000296861 INO80Q9ULG1 1556 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF21-201ENST00000296861 TET3O43151 1660 aa16.28■□□□□ 0.2
TNFRSF21-201ENST00000296861 KIDINS220Q9ULH0 1771 aa16.28■□□□□ 0.2
TNFRSF21-201ENST00000296861 MADDQ8WXG6 1647 aa16.28■□□□□ 0.2
TNFRSF21-201ENST00000296861 LMOD3Q0VAK6 560 aa16.28■□□□□ 0.2
TNFRSF21-201ENST00000296861 REC8O95072 547 aa16.27■□□□□ 0.2
TNFRSF21-201ENST00000296861 HMMRO75330 724 aa16.27■□□□□ 0.2
TNFRSF21-201ENST00000296861 AMPHP49418 695 aa16.27■□□□□ 0.2
TNFRSF21-201ENST00000296861 CIZ1Q9ULV3 898 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF21-201ENST00000296861 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.19
TNFRSF21-201ENST00000296861 KCNJ4P48050 445 aa16.27■□□□□ 0.19
TNFRSF21-201ENST00000296861 CCDC9Q9Y3X0 531 aaKnown RBP16.27■□□□□ 0.19
TNFRSF21-201ENST00000296861 ABCC11Q96J66 1382 aa16.26■□□□□ 0.19
TNFRSF21-201ENST00000296861 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
TNFRSF21-201ENST00000296861 ZNF830Q96NB3 372 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF21-201ENST00000296861 CEP152O94986 1710 aa16.26■□□□□ 0.19
TNFRSF21-201ENST00000296861 CEBPAP49715 358 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF21-201ENST00000296861 ZSCAN23Q3MJ62 389 aa16.26■□□□□ 0.19
TNFRSF21-201ENST00000296861 SNX21Q969T3 373 aa16.26■□□□□ 0.19
TNFRSF21-201ENST00000296861 CCDC173Q0VFZ6 552 aa16.25■□□□□ 0.19
TNFRSF21-201ENST00000296861 TTC22Q5TAA0 569 aa16.25■□□□□ 0.19
TNFRSF21-201ENST00000296861 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
TNFRSF21-201ENST00000296861 MCCP23508 829 aa16.25■□□□□ 0.19
TNFRSF21-201ENST00000296861 PPIP5K1Q6PFW1 1433 aa16.25■□□□□ 0.19
TNFRSF21-201ENST00000296861 G2E3Q7L622 706 aa16.25■□□□□ 0.19
TNFRSF21-201ENST00000296861 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
TNFRSF21-201ENST00000296861 ZNF692Q9BU19 519 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF21-201ENST00000296861 EFCAB6Q5THR3 1501 aa16.25■□□□□ 0.19
TNFRSF21-201ENST00000296861 RBSNQ9H1K0 784 aa16.25■□□□□ 0.19
TNFRSF21-201ENST00000296861 MLH3Q9UHC1 1453 aa16.24■□□□□ 0.19
TNFRSF21-201ENST00000296861 NUDT16Q96DE0 195 aaKnown RBP16.24■□□□□ 0.19
TNFRSF21-201ENST00000296861 KIF2CQ99661 725 aa16.24■□□□□ 0.19
TNFRSF21-201ENST00000296861 ZSCAN30Q86W11 494 aa16.24■□□□□ 0.19
TNFRSF21-201ENST00000296861 NGDNQ8NEJ9 315 aaKnown RBP16.24■□□□□ 0.19
TNFRSF21-201ENST00000296861 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
TNFRSF21-201ENST00000296861 IFT57Q9NWB7 429 aa16.23■□□□□ 0.19
TNFRSF21-201ENST00000296861 NLRP1Q9C000 1473 aa16.23■□□□□ 0.19
TNFRSF21-201ENST00000296861 PPRC1Q5VV67 1664 aaKnown RBP16.23■□□□□ 0.19
TNFRSF21-201ENST00000296861 ERC2O15083 957 aa16.22■□□□□ 0.19
TNFRSF21-201ENST00000296861 FIBPO43427 364 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms