RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ZNF396Q96N95 335 aaPredicted RBP20.87■□□□□ 0.93
PCDHA13-201ENST00000289272 GNAI3P08754 354 aa20.86■□□□□ 0.93
PCDHA13-201ENST00000289272 H0YHG0 523 aa20.86■□□□□ 0.93
PCDHA13-201ENST00000289272 CPLX1O14810 134 aa20.86■□□□□ 0.93
PCDHA13-201ENST00000289272 ANKRD1Q15327 319 aa20.86■□□□□ 0.93
PCDHA13-201ENST00000289272 PLEKHO1Q53GL0 409 aaPredicted RBP20.86■□□□□ 0.93
PCDHA13-201ENST00000289272 NLRP2Q9NX02 1062 aa20.85■□□□□ 0.93
PCDHA13-201ENST00000289272 UBTFL1P0CB47 393 aaPredicted RBP20.85■□□□□ 0.93
PCDHA13-201ENST00000289272 GPATCH8Q9UKJ3 1502 aaKnown RBP20.85■□□□□ 0.93
PCDHA13-201ENST00000289272 PIP4K2AP48426 406 aaPredicted RBP20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 ANKLE2Q86XL3 938 aa20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 HS1BP3Q53T59 392 aa20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 CCDC191Q8NCU4 936 aa20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 SMARCE1Q969G3 411 aa20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 CBFA2T2O43439 604 aa20.83■□□□□ 0.93
PCDHA13-201ENST00000289272 ZSCAN31Q96LW9 406 aaPredicted RBP20.83■□□□□ 0.93
PCDHA13-201ENST00000289272 SRCIN1Q9C0H9 1055 aa20.83■□□□□ 0.93
PCDHA13-201ENST00000289272 UVSSAQ2YD98 709 aa20.83■□□□□ 0.93
PCDHA13-201ENST00000289272 CHD1LQ86WJ1 897 aa20.83■□□□□ 0.93
PCDHA13-201ENST00000289272 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.92
PCDHA13-201ENST00000289272 ABTB2Q8N961 1025 aa20.83■□□□□ 0.92
PCDHA13-201ENST00000289272 ZMYND15Q9H091 742 aa20.83■□□□□ 0.92
PCDHA13-201ENST00000289272 CD109Q6YHK3 1445 aa20.83■□□□□ 0.92
PCDHA13-201ENST00000289272 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.92
PCDHA13-201ENST00000289272 KRT85P78386 507 aa20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 CREBRFQ8IUR6 639 aa20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 SDF4Q9BRK5 362 aa20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 PES1O00541 588 aaKnown RBP20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 DEF6Q9H4E7 631 aa20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 C1orf115Q9H7X2 142 aa20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 ZNF608Q9ULD9 1512 aaPredicted RBP20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 NEMFO60524 1076 aa20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 RTEL1-TNFRSF6BF6WH68 1400 aa20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 FCHSD2O94868 740 aa20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 MYO6Q9UM54 1294 aa20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 NKTRP30414 1462 aaKnown RBP20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 CFAP43Q8NDM7 1665 aa20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 SAFBQ15424 915 aaKnown RBP eCLIP20.8■□□□□ 0.92
PCDHA13-201ENST00000289272 ESCO1Q5FWF5 840 aa20.8■□□□□ 0.92
PCDHA13-201ENST00000289272 PPP6R1Q9UPN7 881 aa20.8■□□□□ 0.92
PCDHA13-201ENST00000289272 GBP3Q9H0R5 595 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 TNMDQ9H2S6 317 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 CTTNBP2Q8WZ74 1663 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 FAM107BQ9H098 131 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 RAPGEF3O95398 923 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 TMPOP42166 694 aaKnown RBP20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 DACH1Q9UI36 760 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 SCAF11Q99590 1463 aaKnown RBP20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 TRDNQ13061 729 aa20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 TCOF1Q13428 1488 aaKnown RBP20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 FILIP1LQ4L180 1135 aa20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 RAPGEF6Q8TEU7 1601 aa20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 C20orf194Q5TEA3 1177 aa20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 SULT6B1Q6IMI4 303 aa20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 SYTL4Q96C24 671 aaPredicted RBP20.77■□□□□ 0.92
PCDHA13-201ENST00000289272 RALGAPBQ86X10 1494 aa20.77■□□□□ 0.92
PCDHA13-201ENST00000289272 RIC3Q7Z5B4 369 aa20.77■□□□□ 0.92
PCDHA13-201ENST00000289272 LRPPRCP42704 1394 aaKnown RBP20.77■□□□□ 0.92
PCDHA13-201ENST00000289272 KIAA0754O94854 1291 aa20.77■□□□□ 0.91
PCDHA13-201ENST00000289272 TXLNBQ8N3L3 684 aa20.77■□□□□ 0.91
PCDHA13-201ENST00000289272 FAM135AQ9P2D6 1515 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 KLHL40Q2TBA0 621 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 GTPBP4Q9BZE4 634 aaKnown RBP20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 CCDC183Q5T5S1 534 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 NUTM2GQ5VZR2 741 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 JMYQ8N9B5 988 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 ADGRL1O94910 1474 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 SMC2O95347 1197 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 GNAI2P04899 355 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 ERC1Q8IUD2 1116 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 DISP3Q9P2K9 1392 aa20.75■□□□□ 0.91
PCDHA13-201ENST00000289272 DHX16O60231 1041 aaKnown RBP20.75■□□□□ 0.91
PCDHA13-201ENST00000289272 TBC1D2Q9BYX2 928 aa20.75■□□□□ 0.91
PCDHA13-201ENST00000289272 MARCH6O60337 910 aa20.75■□□□□ 0.91
PCDHA13-201ENST00000289272 RARSP54136 660 aaKnown RBP20.75■□□□□ 0.91
PCDHA13-201ENST00000289272 SLC4A2P04920 1241 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 TATP17735 454 aaPredicted RBP20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 HMGB2P26583 209 aaKnown RBP20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 VPS37DQ86XT2 251 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 DUSP27Q5VZP5 1158 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 FILIP1Q7Z7B0 1213 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 CCT4P50991 539 aaKnown RBP20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 IQCEQ6IPM2 695 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 NUP62CLQ9H1M0 184 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 SURF6O75683 361 aaKnown RBP20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 PCMTD1Q96MG8 357 aaPredicted RBP20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 NFE2L2Q16236 605 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 NCBP3Q53F19 620 aaKnown RBP20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 TMCO3Q6UWJ1 677 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 FIBPO43427 364 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 ADGRF5Q8IZF2 1346 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 RRP12Q5JTH9 1297 aaKnown RBP20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 CEP57L1Q8IYX8 460 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 CLASRPQ8N2M8 674 aaKnown RBP20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 CYP46A1Q9Y6A2 500 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 ITSN2Q9NZM3 1697 aa20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 NUP153P49790 1475 aaKnown RBP20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 RPAP2Q8IXW5 612 aaPredicted RBP20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 SPC24Q8NBT2 197 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms