RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 OVOS2Q6IE36 1432 aa24.77■■□□□ 1.56
BRAF-201ENST00000288602 CT47B1P0C2W7 299 aaPredicted RBP24.77■■□□□ 1.56
BRAF-201ENST00000288602 HSP90AB2PQ58FF8 381 aa24.77■■□□□ 1.56
BRAF-201ENST00000288602 ERICH6Q7L0X2 663 aa24.77■■□□□ 1.56
BRAF-201ENST00000288602 PCDHB15Q9Y5E8 787 aa24.76■■□□□ 1.55
BRAF-201ENST00000288602 FAM83GA6ND36 823 aa24.76■■□□□ 1.55
BRAF-201ENST00000288602 FTSJ3Q8IY81 847 aaKnown RBP24.76■■□□□ 1.55
BRAF-201ENST00000288602 NOB1Q9ULX3 412 aaKnown RBP24.75■■□□□ 1.55
BRAF-201ENST00000288602 TRIM27P14373 513 aa24.74■■□□□ 1.55
BRAF-201ENST00000288602 SULT6B1Q6IMI4 303 aa24.74■■□□□ 1.55
BRAF-201ENST00000288602 DZIP1LQ8IYY4 767 aaKnown RBP24.74■■□□□ 1.55
BRAF-201ENST00000288602 DCTN1Q14203 1278 aa24.74■■□□□ 1.55
BRAF-201ENST00000288602 SSH2Q76I76 1423 aa24.73■■□□□ 1.55
BRAF-201ENST00000288602 XRN1Q8IZH2 1706 aaKnown RBP24.73■■□□□ 1.55
BRAF-201ENST00000288602 PAK3O75914 559 aaPredicted RBP24.72■■□□□ 1.55
BRAF-201ENST00000288602 MVPQ14764 893 aaKnown RBP24.72■■□□□ 1.55
BRAF-201ENST00000288602 NUTM2GQ5VZR2 741 aa24.72■■□□□ 1.55
BRAF-201ENST00000288602 ELL2O00472 640 aaPredicted RBP24.71■■□□□ 1.55
BRAF-201ENST00000288602 IPO9Q96P70 1041 aaKnown RBP24.71■■□□□ 1.55
BRAF-201ENST00000288602 PEAK1Q9H792 1746 aa24.7■■□□□ 1.55
BRAF-201ENST00000288602 DLG5Q8TDM6 1919 aa24.7■■□□□ 1.55
BRAF-201ENST00000288602 ANKLE2Q86XL3 938 aa24.7■■□□□ 1.54
BRAF-201ENST00000288602 TSPYL6Q8N831 410 aa24.7■■□□□ 1.54
BRAF-201ENST00000288602 ATF7IPQ6VMQ6 1270 aa24.69■■□□□ 1.54
BRAF-201ENST00000288602 MBIPQ9NS73 344 aa24.69■■□□□ 1.54
BRAF-201ENST00000288602 NOP58Q9Y2X3 529 aaKnown RBP24.69■■□□□ 1.54
BRAF-201ENST00000288602 MAP3K19Q56UN5 1328 aa24.68■■□□□ 1.54
BRAF-201ENST00000288602 USP31Q70CQ4 1352 aa24.68■■□□□ 1.54
BRAF-201ENST00000288602 ITPRIPQ8IWB1 547 aa24.68■■□□□ 1.54
BRAF-201ENST00000288602 TTC21AQ8NDW8 1320 aa24.67■■□□□ 1.54
BRAF-201ENST00000288602 NALCNQ8IZF0 1738 aa24.67■■□□□ 1.54
BRAF-201ENST00000288602 GNAI1P63096 354 aa24.66■■□□□ 1.54
BRAF-201ENST00000288602 NLRP6P59044 892 aa24.65■■□□□ 1.54
BRAF-201ENST00000288602 C8orf34Q49A92 452 aa24.65■■□□□ 1.54
BRAF-201ENST00000288602 IFT57Q9NWB7 429 aa24.65■■□□□ 1.54
BRAF-201ENST00000288602 TMEM57Q8N5G2 664 aa24.64■■□□□ 1.54
BRAF-201ENST00000288602 VAMP4O75379 141 aa24.64■■□□□ 1.53
BRAF-201ENST00000288602 ZNF853P0CG23 659 aa24.64■■□□□ 1.53
BRAF-201ENST00000288602 CALD1Q05682 793 aaKnown RBP24.64■■□□□ 1.53
BRAF-201ENST00000288602 BCL11AQ9H165 835 aa24.64■■□□□ 1.53
BRAF-201ENST00000288602 FAM161AQ3B820 660 aa24.63■■□□□ 1.53
BRAF-201ENST00000288602 PIK3R4Q99570 1358 aa24.62■■□□□ 1.53
BRAF-201ENST00000288602 LMOD3Q0VAK6 560 aa24.62■■□□□ 1.53
BRAF-201ENST00000288602 ALDH1L2Q3SY69 923 aa24.62■■□□□ 1.53
BRAF-201ENST00000288602 CFAP44Q96MT7 982 aa24.62■■□□□ 1.53
BRAF-201ENST00000288602 PIK3C2AO00443 1686 aa24.61■■□□□ 1.53
BRAF-201ENST00000288602 AAMPQ13685 434 aa24.61■■□□□ 1.53
BRAF-201ENST00000288602 MCM10Q7L590 875 aa24.61■■□□□ 1.53
BRAF-201ENST00000288602 C8orf58Q8NAV2 365 aa24.61■■□□□ 1.53
BRAF-201ENST00000288602 KIF16BQ96L93 1317 aa24.61■■□□□ 1.53
BRAF-201ENST00000288602 AMPHP49418 695 aa24.61■■□□□ 1.53
BRAF-201ENST00000288602 ZBTB47Q9UFB7 747 aaPredicted RBP24.61■■□□□ 1.53
BRAF-201ENST00000288602 C14orf37Q86TY3 774 aa24.6■■□□□ 1.53
BRAF-201ENST00000288602 ABTB2Q8N961 1025 aa24.59■■□□□ 1.53
BRAF-201ENST00000288602 IPO8O15397 1037 aaKnown RBP24.59■■□□□ 1.53
BRAF-201ENST00000288602 TWISTNBQ3B726 338 aaPredicted RBP24.59■■□□□ 1.53
BRAF-201ENST00000288602 DDX19BQ9UMR2 479 aa24.59■■□□□ 1.53
BRAF-201ENST00000288602 FMN2Q9NZ56 1722 aa24.59■■□□□ 1.53
BRAF-201ENST00000288602 RWDD1Q9H446 243 aaPredicted RBP24.58■■□□□ 1.53
BRAF-201ENST00000288602 ANKARQ7Z5J8 1434 aa24.58■■□□□ 1.53
BRAF-201ENST00000288602 ADAMTSL3P82987 1691 aa24.58■■□□□ 1.53
BRAF-201ENST00000288602 CHD2O14647 1828 aaKnown RBP24.58■■□□□ 1.53
BRAF-201ENST00000288602 FOXO3O43524 673 aa24.57■■□□□ 1.52
BRAF-201ENST00000288602 PDZRN3Q9UPQ7 1066 aa24.57■■□□□ 1.52
BRAF-201ENST00000288602 MRPL50Q8N5N7 158 aaKnown RBP24.57■■□□□ 1.52
BRAF-201ENST00000288602 SBNO1A3KN83 1393 aa24.56■■□□□ 1.52
BRAF-201ENST00000288602 FLT4P35916 1363 aa24.56■■□□□ 1.52
BRAF-201ENST00000288602 KRT24Q2M2I5 525 aa24.56■■□□□ 1.52
BRAF-201ENST00000288602 RGPD1P0DJD0 1748 aa24.55■■□□□ 1.52
BRAF-201ENST00000288602 EYA1Q99502 592 aa24.55■■□□□ 1.52
BRAF-201ENST00000288602 PHF8Q9UPP1 1060 aa24.55■■□□□ 1.52
BRAF-201ENST00000288602 ZNF142P52746 1687 aaPredicted RBP24.54■■□□□ 1.52
BRAF-201ENST00000288602 ZNF428Q96B54 188 aa24.53■■□□□ 1.52
BRAF-201ENST00000288602 MTHFSDQ2M296 383 aaKnown RBP24.53■■□□□ 1.52
BRAF-201ENST00000288602 SETD1BQ9UPS6 1966 aaKnown RBP24.52■■□□□ 1.52
BRAF-201ENST00000288602 ESCO1Q5FWF5 840 aa24.52■■□□□ 1.52
BRAF-201ENST00000288602 LTV1Q96GA3 475 aaPredicted RBP24.52■■□□□ 1.52
BRAF-201ENST00000288602 ZBTB40Q9NUA8 1239 aa24.52■■□□□ 1.52
BRAF-201ENST00000288602 MIS18AQ9NYP9 233 aa24.52■■□□□ 1.52
BRAF-201ENST00000288602 BRPF1P55201 1214 aaPredicted RBP24.51■■□□□ 1.51
BRAF-201ENST00000288602 ARHGEF10O15013 1369 aa24.51■■□□□ 1.51
BRAF-201ENST00000288602 PLEKHG5O94827 1062 aa24.5■■□□□ 1.51
BRAF-201ENST00000288602 HOXC9P31274 260 aa24.5■■□□□ 1.51
BRAF-201ENST00000288602 MARF1Q9Y4F3 1742 aaKnown RBP24.49■■□□□ 1.51
BRAF-201ENST00000288602 NPHP4O75161 1426 aaPredicted RBP24.48■■□□□ 1.51
BRAF-201ENST00000288602 CHL1O00533 1208 aa24.47■■□□□ 1.51
BRAF-201ENST00000288602 IGSF1Q8N6C5 1336 aa24.47■■□□□ 1.51
BRAF-201ENST00000288602 C1orf115Q9H7X2 142 aa24.46■■□□□ 1.51
BRAF-201ENST00000288602 SEC24BO95487 1268 aa24.46■■□□□ 1.51
BRAF-201ENST00000288602 XPCQ01831 940 aaPredicted RBP24.46■■□□□ 1.51
BRAF-201ENST00000288602 PSME1Q06323 249 aa24.46■■□□□ 1.51
BRAF-201ENST00000288602 HDAC1Q13547 482 aaPredicted RBP24.45■■□□□ 1.51
BRAF-201ENST00000288602 ZBTB7CA1YPR0 619 aa24.45■■□□□ 1.5
BRAF-201ENST00000288602 ORAI2Q96SN7 254 aa24.44■■□□□ 1.5
BRAF-201ENST00000288602 KDRP35968 1356 aa24.44■■□□□ 1.5
BRAF-201ENST00000288602 ZBTB7BO15156 539 aaPredicted RBP24.44■■□□□ 1.5
BRAF-201ENST00000288602 USHBP1Q8N6Y0 703 aa24.44■■□□□ 1.5
BRAF-201ENST00000288602 ARHGAP45Q92619 1136 aa24.44■■□□□ 1.5
BRAF-201ENST00000288602 ADGRL3Q9HAR2 1447 aa24.44■■□□□ 1.5
BRAF-201ENST00000288602 NBR1Q14596 966 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms