RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PIK3C2GO75747 1445 aa15.19■□□□□ 0.02
SLC6A1-201ENST00000287766 TPM4P67936 248 aa15.19■□□□□ 0.02
SLC6A1-201ENST00000287766 POLR3AO14802 1390 aaPredicted RBP15.19■□□□□ 0.02
SLC6A1-201ENST00000287766 PHACTR3Q96KR7 559 aa15.19■□□□□ 0.02
SLC6A1-201ENST00000287766 RBM42Q9BTD8 480 aaKnown RBP15.19■□□□□ 0.02
SLC6A1-201ENST00000287766 ABCC10Q5T3U5 1492 aa15.19■□□□□ 0.02
SLC6A1-201ENST00000287766 TSHZ3Q63HK5 1081 aa15.19■□□□□ 0.02
SLC6A1-201ENST00000287766 VPS37CA5D8V6 355 aaPredicted RBP15.18■□□□□ 0.02
SLC6A1-201ENST00000287766 GRPEL1Q9HAV7 217 aa15.18■□□□□ 0.02
SLC6A1-201ENST00000287766 RABEP1Q15276 862 aa15.18■□□□□ 0.02
SLC6A1-201ENST00000287766 KRT24Q2M2I5 525 aa15.18■□□□□ 0.02
SLC6A1-201ENST00000287766 BCORL1Q5H9F3 1711 aa15.18■□□□□ 0.02
SLC6A1-201ENST00000287766 IFIT2P09913 472 aaKnown RBP15.18■□□□□ 0.02
SLC6A1-201ENST00000287766 CCDC27Q2M243 656 aa15.18■□□□□ 0.02
SLC6A1-201ENST00000287766 GNAI2P04899 355 aa15.18■□□□□ 0.02
SLC6A1-201ENST00000287766 HDGFL1Q5TGJ6 251 aa15.17■□□□□ 0.02
SLC6A1-201ENST00000287766 TBC1D9Q6ZT07 1266 aa15.17■□□□□ 0.02
SLC6A1-201ENST00000287766 BLMP54132 1417 aaPredicted RBP15.17■□□□□ 0.02
SLC6A1-201ENST00000287766 IFT57Q9NWB7 429 aa15.17■□□□□ 0.02
SLC6A1-201ENST00000287766 ZMYM4Q5VZL5 1548 aa15.17■□□□□ 0.02
SLC6A1-201ENST00000287766 SSFA2P28290 1259 aa15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 GORABQ5T7V8 394 aa15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 C8orf58Q8NAV2 365 aa15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 ASXL2Q76L83 1435 aa15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 CCDC30Q5VVM6 783 aa15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 AEBP1Q8IUX7 1158 aa15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 ZNF692Q9BU19 519 aaPredicted RBP15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 FOSBP53539 338 aa15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 TNPO1Q92973 898 aaKnown RBP15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 UPF3BQ9BZI7 483 aaKnown RBP15.16■□□□□ 0.02
SLC6A1-201ENST00000287766 ANKRD36BQ8N2N9 1353 aa15.15■□□□□ 0.02
SLC6A1-201ENST00000287766 WASLO00401 505 aaPredicted RBP15.15■□□□□ 0.02
SLC6A1-201ENST00000287766 GNAI3P08754 354 aa15.15■□□□□ 0.02
SLC6A1-201ENST00000287766 TEX35Q5T0J7 233 aa15.15■□□□□ 0.02
SLC6A1-201ENST00000287766 C16orf71Q8IYS4 520 aaPredicted RBP15.15■□□□□ 0.02
SLC6A1-201ENST00000287766 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
SLC6A1-201ENST00000287766 XPCQ01831 940 aaPredicted RBP15.15■□□□□ 0.02
SLC6A1-201ENST00000287766 POLKQ9UBT6 870 aa15.15■□□□□ 0.02
SLC6A1-201ENST00000287766 ERC2O15083 957 aa15.14■□□□□ 0.01
SLC6A1-201ENST00000287766 CEBPAP49715 358 aaPredicted RBP15.14■□□□□ 0.01
SLC6A1-201ENST00000287766 HOMER1Q86YM7 354 aa15.14■□□□□ 0.01
SLC6A1-201ENST00000287766 GAS2L2Q8NHY3 880 aa15.14■□□□□ 0.01
SLC6A1-201ENST00000287766 PANK2Q9BZ23 570 aa15.14■□□□□ 0.01
SLC6A1-201ENST00000287766 SF3A1Q15459 793 aaKnown RBP15.14■□□□□ 0.01
SLC6A1-201ENST00000287766 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
SLC6A1-201ENST00000287766 ABCC11Q96J66 1382 aa15.14■□□□□ 0.01
SLC6A1-201ENST00000287766 SETQ01105 290 aaPredicted RBP15.13■□□□□ 0.01
SLC6A1-201ENST00000287766 APPP05067 770 aa15.13■□□□□ 0.01
SLC6A1-201ENST00000287766 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
SLC6A1-201ENST00000287766 PRDM10Q9NQV6 1147 aa15.13■□□□□ 0.01
SLC6A1-201ENST00000287766 SMC3Q9UQE7 1217 aa15.13■□□□□ 0.01
SLC6A1-201ENST00000287766 A0A1W2PP64 1363 aa15.13■□□□□ 0.01
SLC6A1-201ENST00000287766 EIF2AK4Q9P2K8 1649 aaKnown RBP15.13■□□□□ 0.01
SLC6A1-201ENST00000287766 HSP90AB2PQ58FF8 381 aa15.13■□□□□ 0.01
SLC6A1-201ENST00000287766 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
SLC6A1-201ENST00000287766 NPHP1O15259 732 aa15.12■□□□□ 0.01
SLC6A1-201ENST00000287766 CHMP4AQ9BY43 222 aa15.12■□□□□ 0.01
SLC6A1-201ENST00000287766 ADGBQ8N7X0 1667 aa15.12■□□□□ 0.01
SLC6A1-201ENST00000287766 GPS2Q13227 327 aa15.12■□□□□ 0.01
SLC6A1-201ENST00000287766 HDAC1Q13547 482 aaPredicted RBP15.12■□□□□ 0.01
SLC6A1-201ENST00000287766 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
SLC6A1-201ENST00000287766 LARP6Q9BRS8 491 aaKnown RBP15.12■□□□□ 0.01
SLC6A1-201ENST00000287766 TPM3P06753 285 aa15.12■□□□□ 0.01
SLC6A1-201ENST00000287766 PDE4CQ08493 712 aa15.12■□□□□ 0.01
SLC6A1-201ENST00000287766 ESCO1Q5FWF5 840 aa15.12■□□□□ 0.01
SLC6A1-201ENST00000287766 ZKSCAN1P17029 563 aaPredicted RBP15.11■□□□□ 0.01
SLC6A1-201ENST00000287766 NUCB1Q02818 461 aa15.11■□□□□ 0.01
SLC6A1-201ENST00000287766 G3BP1Q13283 466 aaKnown RBP eCLIP15.11■□□□□ 0.01
SLC6A1-201ENST00000287766 RPAP2Q8IXW5 612 aaPredicted RBP15.11■□□□□ 0.01
SLC6A1-201ENST00000287766 ATP6V1DQ9Y5K8 247 aa15.11■□□□□ 0.01
SLC6A1-201ENST00000287766 PATL2C9JE40 543 aaKnown RBP15.11■□□□□ 0.01
SLC6A1-201ENST00000287766 SIL1Q9H173 461 aa15.11■□□□□ 0.01
SLC6A1-201ENST00000287766 LRRIQ1Q96JM4 1722 aa15.11■□□□□ 0.01
SLC6A1-201ENST00000287766 FIBPO43427 364 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 TAF7LQ5H9L4 462 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 MEIS3Q99687 375 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 NLRP2Q9NX02 1062 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 HDAC5Q9UQL6 1122 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 SRGAP3O43295 1099 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 CCT4P50991 539 aaKnown RBP15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 NEXNQ0ZGT2 675 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 BMP2KLQ5H9B9 411 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 CCDC39Q9UFE4 941 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 RUFY2Q8WXA3 655 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 ZBTB40Q9NUA8 1239 aa15.1■□□□□ 0.01
SLC6A1-201ENST00000287766 UQCRHLA0A096LP55 91 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 UQCRHP07919 91 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 RIC3Q7Z5B4 369 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 CLASRPQ8N2M8 674 aaKnown RBP15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 CCDC66A2RUB6 948 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 H3BQV1 296 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 IFFO2Q5TF58 517 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 WDR7Q9Y4E6 1490 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 SAMD9LQ8IVG5 1584 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 MAST1Q9Y2H9 1570 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 VAMP4O75379 141 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 FBXW7Q969H0 707 aa15.09■□□□□ 0.01
SLC6A1-201ENST00000287766 NSD2O96028 1365 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms