RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 APBB1O00213 710 aa23.11■■□□□ 1.29
SSC4D-201ENST00000275560 TPM2P07951 284 aa23.11■■□□□ 1.29
SSC4D-201ENST00000275560 OTUD7AQ8TE49 926 aaPredicted RBP23.11■■□□□ 1.29
SSC4D-201ENST00000275560 UHRF1BP1LA0JNW5 1464 aa23.11■■□□□ 1.29
SSC4D-201ENST00000275560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.1■■□□□ 1.29
SSC4D-201ENST00000275560 ANP32BQ92688 251 aaKnown RBP23.1■■□□□ 1.29
SSC4D-201ENST00000275560 MSNP26038 577 aaKnown RBP23.1■■□□□ 1.29
SSC4D-201ENST00000275560 ZSCAN23Q3MJ62 389 aa23.1■■□□□ 1.29
SSC4D-201ENST00000275560 RBSNQ9H1K0 784 aa23.1■■□□□ 1.29
SSC4D-201ENST00000275560 PTMSP20962 102 aa23.09■■□□□ 1.29
SSC4D-201ENST00000275560 ZGPATQ8N5A5 531 aaKnown RBP23.09■■□□□ 1.29
SSC4D-201ENST00000275560 LRRC7Q96NW7 1537 aa23.09■■□□□ 1.29
SSC4D-201ENST00000275560 FOXD4L5Q5VV16 416 aaPredicted RBP23.09■■□□□ 1.29
SSC4D-201ENST00000275560 PLEKHM2Q8IWE5 1019 aa23.09■■□□□ 1.29
SSC4D-201ENST00000275560 FOXD4L4Q8WXT5 416 aaPredicted RBP23.09■■□□□ 1.29
SSC4D-201ENST00000275560 LMBRD1Q9NUN5 540 aa23.08■■□□□ 1.29
SSC4D-201ENST00000275560 PRIM1P49642 420 aaKnown RBP23.07■■□□□ 1.28
SSC4D-201ENST00000275560 CALD1Q05682 793 aaKnown RBP23.07■■□□□ 1.28
SSC4D-201ENST00000275560 R3HCC1Q9Y3T6 440 aaKnown RBP23.07■■□□□ 1.28
SSC4D-201ENST00000275560 PRPF40AO75400 957 aaKnown RBP23.06■■□□□ 1.28
SSC4D-201ENST00000275560 OFD1O75665 1012 aa23.06■■□□□ 1.28
SSC4D-201ENST00000275560 MBIPQ9NS73 344 aa23.06■■□□□ 1.28
SSC4D-201ENST00000275560 XPCQ01831 940 aaPredicted RBP23.06■■□□□ 1.28
SSC4D-201ENST00000275560 PRAM1Q96QH2 718 aa23.06■■□□□ 1.28
SSC4D-201ENST00000275560 CLEC17AQ6ZS10 378 aa23.05■■□□□ 1.28
SSC4D-201ENST00000275560 C8orf58Q8NAV2 365 aa23.05■■□□□ 1.28
SSC4D-201ENST00000275560 VGFO15240 615 aaPredicted RBP23.05■■□□□ 1.28
SSC4D-201ENST00000275560 PUS7Q96PZ0 661 aaKnown RBP23.05■■□□□ 1.28
SSC4D-201ENST00000275560 TERF2IPQ9NYB0 399 aa23.05■■□□□ 1.28
SSC4D-201ENST00000275560 FCHSD2O94868 740 aa23.04■■□□□ 1.28
SSC4D-201ENST00000275560 LMTK2Q8IWU2 1503 aa23.04■■□□□ 1.28
SSC4D-201ENST00000275560 SMARCA5O60264 1052 aaPredicted RBP23.04■■□□□ 1.28
SSC4D-201ENST00000275560 ARID3AQ99856 593 aa23.04■■□□□ 1.28
SSC4D-201ENST00000275560 CABP1Q9NZU7 370 aa23.04■■□□□ 1.28
SSC4D-201ENST00000275560 CD163L1Q9NR16 1453 aa23.04■■□□□ 1.28
SSC4D-201ENST00000275560 FAM83GA6ND36 823 aa23.04■■□□□ 1.28
SSC4D-201ENST00000275560 GPT2Q8TD30 523 aa23.04■■□□□ 1.28
SSC4D-201ENST00000275560 RPGRIP1LQ68CZ1 1315 aa23.04■■□□□ 1.28
SSC4D-201ENST00000275560 USP26Q9BXU7 913 aa23.03■■□□□ 1.28
SSC4D-201ENST00000275560 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.03■■□□□ 1.28
SSC4D-201ENST00000275560 ABCC4O15439 1325 aa23.03■■□□□ 1.28
SSC4D-201ENST00000275560 ZNF445P59923 1031 aa23.03■■□□□ 1.28
SSC4D-201ENST00000275560 DCTN1Q14203 1278 aa23.03■■□□□ 1.28
SSC4D-201ENST00000275560 RABEP1Q15276 862 aa23.03■■□□□ 1.28
SSC4D-201ENST00000275560 NSFL1CQ9UNZ2 370 aaKnown RBP23.03■■□□□ 1.28
SSC4D-201ENST00000275560 TWISTNBQ3B726 338 aaPredicted RBP23.02■■□□□ 1.28
SSC4D-201ENST00000275560 PTCH1Q13635 1447 aa23.02■■□□□ 1.28
SSC4D-201ENST00000275560 PDCL3Q9H2J4 239 aa23.02■■□□□ 1.28
SSC4D-201ENST00000275560 FAM13BQ9NYF5 915 aa23.02■■□□□ 1.28
SSC4D-201ENST00000275560 CYP2E1P05181 493 aaPredicted RBP23.01■■□□□ 1.27
SSC4D-201ENST00000275560 NFE2L2Q16236 605 aa23.01■■□□□ 1.27
SSC4D-201ENST00000275560 TTC22Q5TAA0 569 aa23.01■■□□□ 1.27
SSC4D-201ENST00000275560 POLKQ9UBT6 870 aa23.01■■□□□ 1.27
SSC4D-201ENST00000275560 ZBTB7CA1YPR0 619 aa23.01■■□□□ 1.27
SSC4D-201ENST00000275560 BRPF1P55201 1214 aaPredicted RBP23.01■■□□□ 1.27
SSC4D-201ENST00000275560 ZDHHC9Q9Y397 364 aa23.01■■□□□ 1.27
SSC4D-201ENST00000275560 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
SSC4D-201ENST00000275560 IBTKQ9P2D0 1353 aaPredicted RBP23.01■■□□□ 1.27
SSC4D-201ENST00000275560 PIK3R4Q99570 1358 aa23■■□□□ 1.27
SSC4D-201ENST00000275560 EMILIN1Q9Y6C2 1016 aa23■■□□□ 1.27
SSC4D-201ENST00000275560 KNDC1Q76NI1 1749 aa23■■□□□ 1.27
SSC4D-201ENST00000275560 FAM135BQ49AJ0 1406 aa23■■□□□ 1.27
SSC4D-201ENST00000275560 NUCB2P80303 420 aa22.99■■□□□ 1.27
SSC4D-201ENST00000275560 ARHGAP45Q92619 1136 aa22.99■■□□□ 1.27
SSC4D-201ENST00000275560 IDI1Q13907 227 aa22.99■■□□□ 1.27
SSC4D-201ENST00000275560 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.99■■□□□ 1.27
SSC4D-201ENST00000275560 SIGLEC1Q9BZZ2 1709 aa22.98■■□□□ 1.27
SSC4D-201ENST00000275560 KRT24Q2M2I5 525 aa22.98■■□□□ 1.27
SSC4D-201ENST00000275560 NEXMIFQ5QGS0 1516 aa22.98■■□□□ 1.27
SSC4D-201ENST00000275560 SYCE3A1L190 88 aa22.98■■□□□ 1.27
SSC4D-201ENST00000275560 SDSP20132 328 aa22.98■■□□□ 1.27
SSC4D-201ENST00000275560 HDGFL2Q7Z4V5 671 aaPredicted RBP22.97■■□□□ 1.27
SSC4D-201ENST00000275560 RNF214Q8ND24 703 aa22.97■■□□□ 1.27
SSC4D-201ENST00000275560 CDK19Q9BWU1 502 aa22.97■■□□□ 1.27
SSC4D-201ENST00000275560 TMEM63CQ9P1W3 806 aa22.97■■□□□ 1.27
SSC4D-201ENST00000275560 GNAI1P63096 354 aa22.96■■□□□ 1.27
SSC4D-201ENST00000275560 ZNF428Q96B54 188 aa22.96■■□□□ 1.27
SSC4D-201ENST00000275560 DCTPP1Q9H773 170 aa22.96■■□□□ 1.27
SSC4D-201ENST00000275560 ZRANB1Q9UGI0 708 aa22.95■■□□□ 1.27
SSC4D-201ENST00000275560 FRMPD1Q5SYB0 1578 aa22.95■■□□□ 1.26
SSC4D-201ENST00000275560 CHMP4BQ9H444 224 aaKnown RBP22.95■■□□□ 1.26
SSC4D-201ENST00000275560 NOL7Q9UMY1 257 aaKnown RBP22.95■■□□□ 1.26
SSC4D-201ENST00000275560 IFT57Q9NWB7 429 aa22.94■■□□□ 1.26
SSC4D-201ENST00000275560 ANKRD26Q9UPS8 1709 aa22.94■■□□□ 1.26
SSC4D-201ENST00000275560 INTS3Q68E01 1043 aaKnown RBP22.94■■□□□ 1.26
SSC4D-201ENST00000275560 PDLIM2Q96JY6 352 aa22.94■■□□□ 1.26
SSC4D-201ENST00000275560 FOXD4L6Q3SYB3 417 aaPredicted RBP22.93■■□□□ 1.26
SSC4D-201ENST00000275560 FOXD4L3Q6VB84 417 aaPredicted RBP22.93■■□□□ 1.26
SSC4D-201ENST00000275560 ZNF853P0CG23 659 aa22.93■■□□□ 1.26
SSC4D-201ENST00000275560 NOL8Q76FK4 1167 aaKnown RBP22.93■■□□□ 1.26
SSC4D-201ENST00000275560 MPNDQ8N594 471 aa22.93■■□□□ 1.26
SSC4D-201ENST00000275560 ABCC3O15438 1527 aa22.92■■□□□ 1.26
SSC4D-201ENST00000275560 UQCRHLA0A096LP55 91 aa22.92■■□□□ 1.26
SSC4D-201ENST00000275560 UQCRHP07919 91 aa22.92■■□□□ 1.26
SSC4D-201ENST00000275560 PTPRMP28827 1452 aa22.92■■□□□ 1.26
SSC4D-201ENST00000275560 API5Q9BZZ5 524 aaKnown RBP22.91■■□□□ 1.26
SSC4D-201ENST00000275560 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
SSC4D-201ENST00000275560 TSHZ3Q63HK5 1081 aa22.9■■□□□ 1.26
SSC4D-201ENST00000275560 ST18O60284 1047 aa22.9■■□□□ 1.26
SSC4D-201ENST00000275560 ARHGAP31Q2M1Z3 1444 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms