RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
LRTM1-201ENST00000273286 LAPTM4AQ15012 233 aa15.43■□□□□ 0.06
LRTM1-201ENST00000273286 SLC27A5Q9Y2P5 690 aa15.43■□□□□ 0.06
LRTM1-201ENST00000273286 ZMYM3Q14202 1370 aa15.42■□□□□ 0.06
LRTM1-201ENST00000273286 RTEL1-TNFRSF6BF6WH68 1400 aa15.42■□□□□ 0.06
LRTM1-201ENST00000273286 SUPT6HQ7KZ85 1726 aaKnown RBP15.42■□□□□ 0.06
LRTM1-201ENST00000273286 TIAM1Q13009 1591 aa15.41■□□□□ 0.06
LRTM1-201ENST00000273286 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
LRTM1-201ENST00000273286 SLC19A1P41440 591 aa15.41■□□□□ 0.06
LRTM1-201ENST00000273286 NCOA1Q15788 1441 aa15.4■□□□□ 0.06
LRTM1-201ENST00000273286 KRI1Q8N9T8 703 aaKnown RBP15.4■□□□□ 0.06
LRTM1-201ENST00000273286 EMID1Q96A84 441 aaPredicted RBP15.4■□□□□ 0.06
LRTM1-201ENST00000273286 GRIPAP1Q4V328 841 aa15.39■□□□□ 0.05
LRTM1-201ENST00000273286 THAP11Q96EK4 314 aa15.39■□□□□ 0.05
LRTM1-201ENST00000273286 GPCPD1Q9NPB8 672 aa15.39■□□□□ 0.05
LRTM1-201ENST00000273286 IQSEC2Q5JU85 1478 aa15.38■□□□□ 0.05
LRTM1-201ENST00000273286 MBD5Q9P267 1494 aa15.38■□□□□ 0.05
LRTM1-201ENST00000273286 FMNL1O95466 1100 aaPredicted RBP15.38■□□□□ 0.05
LRTM1-201ENST00000273286 CLCN1P35523 988 aa15.38■□□□□ 0.05
LRTM1-201ENST00000273286 FAM135AQ9P2D6 1515 aa15.37■□□□□ 0.05
LRTM1-201ENST00000273286 CLTCQ00610 1675 aaKnown RBP15.36■□□□□ 0.05
LRTM1-201ENST00000273286 GGT6Q6P531 493 aa15.36■□□□□ 0.05
LRTM1-201ENST00000273286 BARGINQ6ZT62 677 aa15.36■□□□□ 0.05
LRTM1-201ENST00000273286 ZC3H15Q8WU90 426 aaKnown RBP15.36■□□□□ 0.05
LRTM1-201ENST00000273286 PLA2R1Q13018 1463 aa15.36■□□□□ 0.05
LRTM1-201ENST00000273286 ZNF142P52746 1687 aaPredicted RBP15.36■□□□□ 0.05
LRTM1-201ENST00000273286 KDM4AO75164 1064 aa15.35■□□□□ 0.05
LRTM1-201ENST00000273286 CAMSAP1Q5T5Y3 1602 aa15.35■□□□□ 0.05
LRTM1-201ENST00000273286 DHX29Q7Z478 1369 aaKnown RBP15.35■□□□□ 0.05
LRTM1-201ENST00000273286 NRG2O14511 850 aaPredicted RBP15.34■□□□□ 0.05
LRTM1-201ENST00000273286 ZMYND10O75800 440 aa15.34■□□□□ 0.05
LRTM1-201ENST00000273286 CCDC141Q6ZP82 1450 aa15.34■□□□□ 0.05
LRTM1-201ENST00000273286 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
LRTM1-201ENST00000273286 RNF19BQ6ZMZ0 732 aa15.34■□□□□ 0.05
LRTM1-201ENST00000273286 LIAT1Q6ZQX7 453 aa15.34■□□□□ 0.05
LRTM1-201ENST00000273286 FAM217BQ9NTX9 383 aaPredicted RBP15.34■□□□□ 0.05
LRTM1-201ENST00000273286 PDZRN3Q9UPQ7 1066 aa15.34■□□□□ 0.05
LRTM1-201ENST00000273286 SALL2Q9Y467 1007 aaPredicted RBP15.34■□□□□ 0.05
LRTM1-201ENST00000273286 ZNF644Q9H582 1327 aaPredicted RBP15.33■□□□□ 0.05
LRTM1-201ENST00000273286 MYO3AQ8NEV4 1616 aa15.33■□□□□ 0.04
LRTM1-201ENST00000273286 NCOA2Q15596 1464 aa15.33■□□□□ 0.04
LRTM1-201ENST00000273286 PLA2G2CQ5R387 149 aa15.33■□□□□ 0.04
LRTM1-201ENST00000273286 SPRYD7Q5W111 196 aa15.33■□□□□ 0.04
LRTM1-201ENST00000273286 CEP170BQ9Y4F5 1589 aaPredicted RBP15.33■□□□□ 0.04
LRTM1-201ENST00000273286 LTBP4Q8N2S1 1624 aa15.32■□□□□ 0.04
LRTM1-201ENST00000273286 BRICD5Q6PL45 260 aa15.32■□□□□ 0.04
LRTM1-201ENST00000273286 FAM160A2Q8N612 972 aaPredicted RBP15.32■□□□□ 0.04
LRTM1-201ENST00000273286 CAMSAP2Q08AD1 1489 aa15.31■□□□□ 0.04
LRTM1-201ENST00000273286 PRDM9Q9NQV7 894 aa15.31■□□□□ 0.04
LRTM1-201ENST00000273286 USP46P62068 366 aa15.29■□□□□ 0.04
LRTM1-201ENST00000273286 Q3C1V9 767 aa15.29■□□□□ 0.04
LRTM1-201ENST00000273286 REPIN1Q9BWE0 567 aaKnown RBP15.29■□□□□ 0.04
LRTM1-201ENST00000273286 TCOF1Q13428 1488 aaKnown RBP15.29■□□□□ 0.04
LRTM1-201ENST00000273286 ARHGEF5Q12774 1597 aa15.28■□□□□ 0.04
LRTM1-201ENST00000273286 KDM5DQ9BY66 1539 aa15.28■□□□□ 0.04
LRTM1-201ENST00000273286 A2ML1A8K2U0 1454 aa15.28■□□□□ 0.04
LRTM1-201ENST00000273286 TSPY4P0CV99 314 aa15.28■□□□□ 0.04
LRTM1-201ENST00000273286 TSPY10P0CW01 314 aa15.28■□□□□ 0.04
LRTM1-201ENST00000273286 ZNF598Q86UK7 904 aaKnown RBP15.28■□□□□ 0.04
LRTM1-201ENST00000273286 HLA-CQ95604 372 aa15.28■□□□□ 0.04
LRTM1-201ENST00000273286 FCF1Q9Y324 198 aaKnown RBP15.28■□□□□ 0.04
LRTM1-201ENST00000273286 VPS8Q8N3P4 1428 aa15.27■□□□□ 0.04
LRTM1-201ENST00000273286 KIF3BO15066 747 aa15.26■□□□□ 0.03
LRTM1-201ENST00000273286 HOXA2O43364 376 aa15.26■□□□□ 0.03
LRTM1-201ENST00000273286 TTLL12Q14166 644 aaPredicted RBP15.26■□□□□ 0.03
LRTM1-201ENST00000273286 MSS51Q4VC12 460 aa15.26■□□□□ 0.03
LRTM1-201ENST00000273286 ZNF697Q5TEC3 545 aa15.26■□□□□ 0.03
LRTM1-201ENST00000273286 TRIM67Q6ZTA4 783 aa15.26■□□□□ 0.03
LRTM1-201ENST00000273286 PZPP20742 1482 aa15.26■□□□□ 0.03
LRTM1-201ENST00000273286 MAP3K1Q13233 1512 aa15.25■□□□□ 0.03
LRTM1-201ENST00000273286 LRRC9Q6ZRR7 1453 aa15.25■□□□□ 0.03
LRTM1-201ENST00000273286 WASHC2CQ9Y4E1 1318 aa15.25■□□□□ 0.03
LRTM1-201ENST00000273286 DNMT1P26358 1616 aaKnown RBP15.23■□□□□ 0.03
LRTM1-201ENST00000273286 TNRQ92752 1358 aa15.23■□□□□ 0.03
LRTM1-201ENST00000273286 NUTM1Q86Y26 1132 aa15.23■□□□□ 0.03
LRTM1-201ENST00000273286 NLRP1Q9C000 1473 aa15.22■□□□□ 0.03
LRTM1-201ENST00000273286 LCE2BO14633 110 aa15.22■□□□□ 0.03
LRTM1-201ENST00000273286 GUCA2AQ02747 115 aa15.22■□□□□ 0.03
LRTM1-201ENST00000273286 AMHR2Q16671 573 aa15.22■□□□□ 0.03
LRTM1-201ENST00000273286 MIA2Q96PC5 1412 aa15.22■□□□□ 0.03
LRTM1-201ENST00000273286 MAST1Q9Y2H9 1570 aa15.22■□□□□ 0.03
LRTM1-201ENST00000273286 ZNF335Q9H4Z2 1342 aaPredicted RBP15.21■□□□□ 0.03
LRTM1-201ENST00000273286 SSTR3P32745 418 aaPredicted RBP15.21■□□□□ 0.03
LRTM1-201ENST00000273286 TRAF7Q6Q0C0 670 aa15.21■□□□□ 0.03
LRTM1-201ENST00000273286 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
LRTM1-201ENST00000273286 ZC3H13Q5T200 1668 aaKnown RBP15.19■□□□□ 0.02
LRTM1-201ENST00000273286 THEMISQ8N1K5 641 aaPredicted RBP15.19■□□□□ 0.02
LRTM1-201ENST00000273286 USB1Q9BQ65 265 aaKnown RBP15.19■□□□□ 0.02
LRTM1-201ENST00000273286 EIF2AK4Q9P2K8 1649 aaKnown RBP15.19■□□□□ 0.02
LRTM1-201ENST00000273286 RNF17Q9BXT8 1623 aaKnown RBP15.18■□□□□ 0.02
LRTM1-201ENST00000273286 POLR1AO95602 1720 aaPredicted RBP15.18■□□□□ 0.02
LRTM1-201ENST00000273286 MYOM3Q5VTT5 1437 aa15.18■□□□□ 0.02
LRTM1-201ENST00000273286 TNFRSF10AO00220 468 aa15.17■□□□□ 0.02
LRTM1-201ENST00000273286 RPIAP49247 311 aa15.17■□□□□ 0.02
LRTM1-201ENST00000273286 PRR20EP86478 221 aa15.17■□□□□ 0.02
LRTM1-201ENST00000273286 PRR20CP86479 221 aa15.17■□□□□ 0.02
LRTM1-201ENST00000273286 PRR20DP86480 221 aa15.17■□□□□ 0.02
LRTM1-201ENST00000273286 PRR20BP86481 221 aa15.17■□□□□ 0.02
LRTM1-201ENST00000273286 PRR20AP86496 221 aa15.17■□□□□ 0.02
LRTM1-201ENST00000273286 FBXO31Q5XUX0 539 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms