RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 TMEM132EQ6IEE7 984 aa18.98■□□□□ 0.63
SCAMP2-201ENST00000268099 SMAP1Q8IYB5 467 aaPredicted RBP18.98■□□□□ 0.63
SCAMP2-201ENST00000268099 C14orf93Q9H972 538 aaKnown RBP18.98■□□□□ 0.63
SCAMP2-201ENST00000268099 SASS6Q6UVJ0 657 aa18.97■□□□□ 0.63
SCAMP2-201ENST00000268099 CCDC39Q9UFE4 941 aa18.97■□□□□ 0.63
SCAMP2-201ENST00000268099 PPLO60437 1756 aa18.97■□□□□ 0.63
SCAMP2-201ENST00000268099 GSPT1P15170 499 aaKnown RBP18.97■□□□□ 0.63
SCAMP2-201ENST00000268099 SIRT2Q8IXJ6 389 aa18.97■□□□□ 0.63
SCAMP2-201ENST00000268099 CWC22Q9HCG8 908 aaKnown RBP18.97■□□□□ 0.63
SCAMP2-201ENST00000268099 PIK3R4Q99570 1358 aa18.96■□□□□ 0.63
SCAMP2-201ENST00000268099 TULP4Q9NRJ4 1543 aa18.96■□□□□ 0.63
SCAMP2-201ENST00000268099 LRSAM1Q6UWE0 723 aa18.96■□□□□ 0.63
SCAMP2-201ENST00000268099 PUS7Q96PZ0 661 aaKnown RBP18.96■□□□□ 0.63
SCAMP2-201ENST00000268099 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
SCAMP2-201ENST00000268099 ZNF428Q96B54 188 aa18.95■□□□□ 0.62
SCAMP2-201ENST00000268099 EVC2Q86UK5 1308 aa18.95■□□□□ 0.62
SCAMP2-201ENST00000268099 CHGAP10645 457 aaKnown RBP18.95■□□□□ 0.62
SCAMP2-201ENST00000268099 CFAP44Q96MT7 982 aa18.95■□□□□ 0.62
SCAMP2-201ENST00000268099 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
SCAMP2-201ENST00000268099 FANCAO15360 1455 aa18.94■□□□□ 0.62
SCAMP2-201ENST00000268099 USP26Q9BXU7 913 aa18.94■□□□□ 0.62
SCAMP2-201ENST00000268099 TMEM63CQ9P1W3 806 aa18.94■□□□□ 0.62
SCAMP2-201ENST00000268099 ERCC6L2Q5T890 1561 aa18.93■□□□□ 0.62
SCAMP2-201ENST00000268099 ARHGAP45Q92619 1136 aa18.93■□□□□ 0.62
SCAMP2-201ENST00000268099 ARID3AQ99856 593 aa18.93■□□□□ 0.62
SCAMP2-201ENST00000268099 SYCE3A1L190 88 aa18.93■□□□□ 0.62
SCAMP2-201ENST00000268099 PLEKHM2Q8IWE5 1019 aa18.92■□□□□ 0.62
SCAMP2-201ENST00000268099 ZGPATQ8N5A5 531 aaKnown RBP18.92■□□□□ 0.62
SCAMP2-201ENST00000268099 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
SCAMP2-201ENST00000268099 ZDHHC9Q9Y397 364 aa18.92■□□□□ 0.62
SCAMP2-201ENST00000268099 ARAP3Q8WWN8 1544 aa18.92■□□□□ 0.62
SCAMP2-201ENST00000268099 ARHGEF28Q8N1W1 1705 aaKnown RBP18.91■□□□□ 0.62
SCAMP2-201ENST00000268099 GGNBP2Q9H3C7 697 aa18.91■□□□□ 0.62
SCAMP2-201ENST00000268099 ANKRD26Q9UPS8 1709 aa18.91■□□□□ 0.62
SCAMP2-201ENST00000268099 GLI2P10070 1586 aa18.91■□□□□ 0.62
SCAMP2-201ENST00000268099 TTC22Q5TAA0 569 aa18.91■□□□□ 0.62
SCAMP2-201ENST00000268099 ST18O60284 1047 aa18.9■□□□□ 0.62
SCAMP2-201ENST00000268099 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
SCAMP2-201ENST00000268099 A0A1W2PP64 1363 aa18.9■□□□□ 0.62
SCAMP2-201ENST00000268099 ABCC4O15439 1325 aa18.9■□□□□ 0.62
SCAMP2-201ENST00000268099 INTS3Q68E01 1043 aaKnown RBP18.89■□□□□ 0.61
SCAMP2-201ENST00000268099 NSFL1CQ9UNZ2 370 aaKnown RBP18.89■□□□□ 0.61
SCAMP2-201ENST00000268099 VAMP4O75379 141 aa18.89■□□□□ 0.61
SCAMP2-201ENST00000268099 PODXL2Q9NZ53 605 aa18.89■□□□□ 0.61
SCAMP2-201ENST00000268099 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
SCAMP2-201ENST00000268099 CHAMP1Q96JM3 812 aa18.88■□□□□ 0.61
SCAMP2-201ENST00000268099 CCDC94Q9BW85 323 aaPredicted RBP18.88■□□□□ 0.61
SCAMP2-201ENST00000268099 KNDC1Q76NI1 1749 aa18.87■□□□□ 0.61
SCAMP2-201ENST00000268099 LRRC7Q96NW7 1537 aa18.87■□□□□ 0.61
SCAMP2-201ENST00000268099 MBD3O95983 291 aa18.87■□□□□ 0.61
SCAMP2-201ENST00000268099 KIAA2012Q0VF49 1180 aa18.87■□□□□ 0.61
SCAMP2-201ENST00000268099 RNF214Q8ND24 703 aa18.87■□□□□ 0.61
SCAMP2-201ENST00000268099 PRDM10Q9NQV6 1147 aa18.86■□□□□ 0.61
SCAMP2-201ENST00000268099 PTMAP06454 111 aaKnown RBP18.85■□□□□ 0.61
SCAMP2-201ENST00000268099 TSPYL6Q8N831 410 aa18.85■□□□□ 0.61
SCAMP2-201ENST00000268099 DCTPP1Q9H773 170 aa18.85■□□□□ 0.61
SCAMP2-201ENST00000268099 LMTK2Q8IWU2 1503 aa18.85■□□□□ 0.61
SCAMP2-201ENST00000268099 MYRIPQ8NFW9 859 aa18.84■□□□□ 0.61
SCAMP2-201ENST00000268099 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.84■□□□□ 0.619e-8■■■□□ 16.3
SCAMP2-201ENST00000268099 CFAP65Q6ZU64 1925 aaKnown RBP18.84■□□□□ 0.61
SCAMP2-201ENST00000268099 FCHSD2O94868 740 aa18.84■□□□□ 0.61
SCAMP2-201ENST00000268099 PNPLA6Q8IY17 1366 aa18.84■□□□□ 0.61
SCAMP2-201ENST00000268099 CASC1Q6TDU7 716 aa18.83■□□□□ 0.61
SCAMP2-201ENST00000268099 C16orf71Q8IYS4 520 aaPredicted RBP18.83■□□□□ 0.61
SCAMP2-201ENST00000268099 CDC42BPGQ6DT37 1551 aa18.83■□□□□ 0.61
SCAMP2-201ENST00000268099 FYB1O15117 783 aa18.83■□□□□ 0.6
SCAMP2-201ENST00000268099 FAM135BQ49AJ0 1406 aa18.83■□□□□ 0.6
SCAMP2-201ENST00000268099 TSPY26PQ9H489 355 aa18.83■□□□□ 0.6
SCAMP2-201ENST00000268099 SDSP20132 328 aa18.82■□□□□ 0.6
SCAMP2-201ENST00000268099 PRKAR2BP31323 418 aa18.82■□□□□ 0.6
SCAMP2-201ENST00000268099 DMTNQ08495 405 aa18.82■□□□□ 0.6
SCAMP2-201ENST00000268099 SAFB2Q14151 953 aaKnown RBP eCLIP18.82■□□□□ 0.6
SCAMP2-201ENST00000268099 UTP14CQ5TAP6 766 aaKnown RBP18.82■□□□□ 0.6
SCAMP2-201ENST00000268099 FOXD4L5Q5VV16 416 aaPredicted RBP18.82■□□□□ 0.6
SCAMP2-201ENST00000268099 FOXD4L4Q8WXT5 416 aaPredicted RBP18.82■□□□□ 0.6
SCAMP2-201ENST00000268099 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
SCAMP2-201ENST00000268099 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
SCAMP2-201ENST00000268099 DNTTIP2Q5QJE6 756 aaKnown RBP18.81■□□□□ 0.6
SCAMP2-201ENST00000268099 API5Q9BZZ5 524 aaKnown RBP18.81■□□□□ 0.6
SCAMP2-201ENST00000268099 RPGRIP1LQ68CZ1 1315 aa18.81■□□□□ 0.6
SCAMP2-201ENST00000268099 ABCA9Q8IUA7 1624 aa18.81■□□□□ 0.6
SCAMP2-201ENST00000268099 ELL2O00472 640 aaPredicted RBP18.8■□□□□ 0.6
SCAMP2-201ENST00000268099 REC8O95072 547 aa18.8■□□□□ 0.6
SCAMP2-201ENST00000268099 OTUD7AQ8TE49 926 aaPredicted RBP18.8■□□□□ 0.6
SCAMP2-201ENST00000268099 ZHX1Q9UKY1 873 aaPredicted RBP18.8■□□□□ 0.6
SCAMP2-201ENST00000268099 ATAD2Q6PL18 1390 aa18.8■□□□□ 0.6
SCAMP2-201ENST00000268099 PRIMPOLQ96LW4 560 aa18.8■□□□□ 0.6
SCAMP2-201ENST00000268099 YEATS2Q9ULM3 1422 aa18.8■□□□□ 0.6
SCAMP2-201ENST00000268099 KIF24Q5T7B8 1368 aa18.79■□□□□ 0.6
SCAMP2-201ENST00000268099 GNAI1P63096 354 aa18.79■□□□□ 0.6
SCAMP2-201ENST00000268099 SRPK2P78362 688 aaKnown RBP18.79■□□□□ 0.6
SCAMP2-201ENST00000268099 UHRF1BP1LA0JNW5 1464 aa18.79■□□□□ 0.6
SCAMP2-201ENST00000268099 ZSCAN20P17040 1043 aaPredicted RBP18.78■□□□□ 0.6
SCAMP2-201ENST00000268099 NFE2L2Q16236 605 aa18.78■□□□□ 0.6
SCAMP2-201ENST00000268099 SYAP1Q96A49 352 aaPredicted RBP18.78■□□□□ 0.6
SCAMP2-201ENST00000268099 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
SCAMP2-201ENST00000268099 ZFYVE9O95405 1425 aa18.78■□□□□ 0.6
SCAMP2-201ENST00000268099 TWISTNBQ3B726 338 aaPredicted RBP18.78■□□□□ 0.6
SCAMP2-201ENST00000268099 NUTM2DQ5VT03 806 aaPredicted RBP18.78■□□□□ 0.6
SCAMP2-201ENST00000268099 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms