RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.48
PDLIM2-201ENST00000265810 MFAP1P55081 439 aaKnown RBP18.02■□□□□ 0.47
PDLIM2-201ENST00000265810 AMOTQ4VCS5 1084 aa18.02■□□□□ 0.47
PDLIM2-201ENST00000265810 A2ML1A8K2U0 1454 aa18.02■□□□□ 0.47
PDLIM2-201ENST00000265810 DIP2BQ9P265 1576 aa18.02■□□□□ 0.47
PDLIM2-201ENST00000265810 E9PCH4 1651 aa18.01■□□□□ 0.47
PDLIM2-201ENST00000265810 PLEKHG3A1L390 1219 aa18.01■□□□□ 0.47
PDLIM2-201ENST00000265810 GCP02774 474 aa18.01■□□□□ 0.47
PDLIM2-201ENST00000265810 CFAP44Q96MT7 982 aa18.01■□□□□ 0.47
PDLIM2-201ENST00000265810 MAP3K19Q56UN5 1328 aa18.01■□□□□ 0.47
PDLIM2-201ENST00000265810 RARSP54136 660 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-201ENST00000265810 SSH1Q8WYL5 1049 aa18.01■□□□□ 0.47
PDLIM2-201ENST00000265810 SPHKAPQ2M3C7 1700 aa18■□□□□ 0.47
PDLIM2-201ENST00000265810 EDC4Q6P2E9 1401 aaKnown RBP18■□□□□ 0.47
PDLIM2-201ENST00000265810 CEP152O94986 1710 aa18■□□□□ 0.47
PDLIM2-201ENST00000265810 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
PDLIM2-201ENST00000265810 ROBO2Q9HCK4 1378 aa18■□□□□ 0.47
PDLIM2-201ENST00000265810 AAMPQ13685 434 aa18■□□□□ 0.47
PDLIM2-201ENST00000265810 GLI2P10070 1586 aa18■□□□□ 0.47
PDLIM2-201ENST00000265810 ABCA6Q8N139 1617 aa18■□□□□ 0.47
PDLIM2-201ENST00000265810 TAF7Q15545 349 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-201ENST00000265810 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
PDLIM2-201ENST00000265810 GPATCH3Q96I76 525 aa17.99■□□□□ 0.47
PDLIM2-201ENST00000265810 ZNF428Q96B54 188 aa17.99■□□□□ 0.47
PDLIM2-201ENST00000265810 LNPKQ9C0E8 428 aa17.99■□□□□ 0.47
PDLIM2-201ENST00000265810 UBTFL1P0CB47 393 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-201ENST00000265810 PDE4AP27815 886 aa17.98■□□□□ 0.47
PDLIM2-201ENST00000265810 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
PDLIM2-201ENST00000265810 C20orf194Q5TEA3 1177 aa17.98■□□□□ 0.47
PDLIM2-201ENST00000265810 KIAA1211Q6ZU35 1233 aa17.98■□□□□ 0.47
PDLIM2-201ENST00000265810 NKTRP30414 1462 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-201ENST00000265810 FLT4P35916 1363 aa17.98■□□□□ 0.47
PDLIM2-201ENST00000265810 MCCP23508 829 aa17.97■□□□□ 0.47
PDLIM2-201ENST00000265810 LRRC59Q96AG4 307 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-201ENST00000265810 ZFYVE9O95405 1425 aa17.97■□□□□ 0.47
PDLIM2-201ENST00000265810 FGD1P98174 961 aa17.96■□□□□ 0.47
PDLIM2-201ENST00000265810 PHACTR3Q96KR7 559 aa17.96■□□□□ 0.47
PDLIM2-201ENST00000265810 DDX17Q92841 729 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-201ENST00000265810 UBAP1LF5GYI3 381 aa17.96■□□□□ 0.47
PDLIM2-201ENST00000265810 MYL6BP14649 208 aa17.96■□□□□ 0.47
PDLIM2-201ENST00000265810 MVPQ14764 893 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-201ENST00000265810 TOM1O60784 492 aa17.95■□□□□ 0.46
PDLIM2-201ENST00000265810 EYA1Q99502 592 aa17.95■□□□□ 0.46
PDLIM2-201ENST00000265810 MAP3K4Q9Y6R4 1608 aa17.95■□□□□ 0.46
PDLIM2-201ENST00000265810 PPRC1Q5VV67 1664 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-201ENST00000265810 GNAI3P08754 354 aa17.95■□□□□ 0.46
PDLIM2-201ENST00000265810 FAM161AQ3B820 660 aa17.95■□□□□ 0.46
PDLIM2-201ENST00000265810 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-201ENST00000265810 NPHP4O75161 1426 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-201ENST00000265810 SPRYD3Q8NCJ5 442 aa17.94■□□□□ 0.46
PDLIM2-201ENST00000265810 HSCBQ8IWL3 235 aa17.94■□□□□ 0.46
PDLIM2-201ENST00000265810 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
PDLIM2-201ENST00000265810 HOXC9P31274 260 aa17.94■□□□□ 0.46
PDLIM2-201ENST00000265810 RILPL2Q969X0 211 aa17.94■□□□□ 0.46
PDLIM2-201ENST00000265810 PTCD1O75127 700 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-201ENST00000265810 KDM5AP29375 1690 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-201ENST00000265810 MSH5O43196 834 aa17.93■□□□□ 0.46
PDLIM2-201ENST00000265810 TMEM57Q8N5G2 664 aa17.93■□□□□ 0.46
PDLIM2-201ENST00000265810 NGLY1Q96IV0 654 aa17.93■□□□□ 0.46
PDLIM2-201ENST00000265810 MTHFSDQ2M296 383 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-201ENST00000265810 G3BP1Q13283 466 aaKnown RBP eCLIP17.91■□□□□ 0.46
PDLIM2-201ENST00000265810 IP6K1Q92551 441 aa17.91■□□□□ 0.46
PDLIM2-201ENST00000265810 IL13P35225 146 aa17.91■□□□□ 0.46
PDLIM2-201ENST00000265810 CCT4P50991 539 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-201ENST00000265810 CCDC27Q2M243 656 aa17.91■□□□□ 0.46
PDLIM2-201ENST00000265810 ALDH1L2Q3SY69 923 aa17.91■□□□□ 0.46
PDLIM2-201ENST00000265810 SLAIN2Q9P270 581 aa17.91■□□□□ 0.46
PDLIM2-201ENST00000265810 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
PDLIM2-201ENST00000265810 SRCIN1Q9C0H9 1055 aa17.9■□□□□ 0.46
PDLIM2-201ENST00000265810 RSPH6AQ9H0K4 717 aa17.9■□□□□ 0.46
PDLIM2-201ENST00000265810 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
PDLIM2-201ENST00000265810 ADGRB3O60242 1522 aa17.9■□□□□ 0.46
PDLIM2-201ENST00000265810 IL16Q14005 1332 aa17.9■□□□□ 0.46
PDLIM2-201ENST00000265810 NAP1L2Q9ULW6 460 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-201ENST00000265810 TMEM94Q12767 1356 aa17.9■□□□□ 0.46
PDLIM2-201ENST00000265810 IFNL2Q8IZJ0 200 aa17.9■□□□□ 0.46
PDLIM2-201ENST00000265810 LMTK3Q96Q04 1460 aa17.89■□□□□ 0.45
PDLIM2-201ENST00000265810 TRPM1Q7Z4N2 1603 aa17.89■□□□□ 0.45
PDLIM2-201ENST00000265810 AGLP35573 1532 aa17.89■□□□□ 0.45
PDLIM2-201ENST00000265810 GNAI2P04899 355 aa17.89■□□□□ 0.45
PDLIM2-201ENST00000265810 CLTCQ00610 1675 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-201ENST00000265810 TAOK2Q9UL54 1235 aa17.88■□□□□ 0.45
PDLIM2-201ENST00000265810 PDZRN3Q9UPQ7 1066 aa17.88■□□□□ 0.45
PDLIM2-201ENST00000265810 SURF6O75683 361 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-201ENST00000265810 IFIT2P09913 472 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-201ENST00000265810 FAM177BA6PVY3 158 aa17.87■□□□□ 0.45
PDLIM2-201ENST00000265810 TMOD3Q9NYL9 352 aa17.87■□□□□ 0.45
PDLIM2-201ENST00000265810 FAM135BQ49AJ0 1406 aa17.87■□□□□ 0.45
PDLIM2-201ENST00000265810 EXOC5O00471 708 aa17.86■□□□□ 0.45
PDLIM2-201ENST00000265810 SPINK5Q9NQ38 1064 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-201ENST00000265810 TRIM27P14373 513 aa17.86■□□□□ 0.45
PDLIM2-201ENST00000265810 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
PDLIM2-201ENST00000265810 SBNO1A3KN83 1393 aa17.85■□□□□ 0.45
PDLIM2-201ENST00000265810 KIF6Q6ZMV9 814 aa17.85■□□□□ 0.45
PDLIM2-201ENST00000265810 F6X3S4 739 aa17.85■□□□□ 0.45
PDLIM2-201ENST00000265810 GOLGA6L22H0YM25 854 aa17.84■□□□□ 0.45
PDLIM2-201ENST00000265810 MADDQ8WXG6 1647 aa17.84■□□□□ 0.45
PDLIM2-201ENST00000265810 ALKQ9UM73 1620 aa17.84■□□□□ 0.45
PDLIM2-201ENST00000265810 TMX4Q9H1E5 349 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-201ENST00000265810 FRAT2O75474 233 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms