RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 CLUAP1Q96AJ1 413 aa15.33■□□□□ 0.04
CDKL3-201ENST00000265334 RLBP1P12271 317 aa15.32■□□□□ 0.04
CDKL3-201ENST00000265334 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
CDKL3-201ENST00000265334 FRAT1Q92837 279 aaPredicted RBP15.32■□□□□ 0.04
CDKL3-201ENST00000265334 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
CDKL3-201ENST00000265334 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
CDKL3-201ENST00000265334 PIK3C2AO00443 1686 aa15.32■□□□□ 0.04
CDKL3-201ENST00000265334 NFE2L2Q16236 605 aa15.32■□□□□ 0.04
CDKL3-201ENST00000265334 PROSER2Q86WR7 435 aaPredicted RBP15.32■□□□□ 0.04
CDKL3-201ENST00000265334 RBM33Q96EV2 1170 aaKnown RBP15.32■□□□□ 0.04
CDKL3-201ENST00000265334 STRCP1A6NGW2 1772 aa15.32■□□□□ 0.04
CDKL3-201ENST00000265334 HSPA2P54652 639 aa15.31■□□□□ 0.04
CDKL3-201ENST00000265334 TNNQ9UQP3 1299 aa15.31■□□□□ 0.04
CDKL3-201ENST00000265334 IGHDP01880 384 aa15.31■□□□□ 0.04
CDKL3-201ENST00000265334 STRCQ7RTU9 1775 aa15.3■□□□□ 0.04
CDKL3-201ENST00000265334 RRS1Q15050 365 aaKnown RBP15.3■□□□□ 0.04
CDKL3-201ENST00000265334 C14orf37Q86TY3 774 aa15.3■□□□□ 0.04
CDKL3-201ENST00000265334 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
CDKL3-201ENST00000265334 HMOX1P09601 288 aa15.29■□□□□ 0.04
CDKL3-201ENST00000265334 MYT1Q01538 1121 aa15.29■□□□□ 0.04
CDKL3-201ENST00000265334 PEAK1Q9H792 1746 aa15.29■□□□□ 0.04
CDKL3-201ENST00000265334 C19orf44Q9H6X5 657 aa15.29■□□□□ 0.04
CDKL3-201ENST00000265334 RGPD1P0DJD0 1748 aa15.29■□□□□ 0.04
CDKL3-201ENST00000265334 DCCP43146 1447 aa15.28■□□□□ 0.04
CDKL3-201ENST00000265334 NEFMP07197 916 aa15.28■□□□□ 0.04
CDKL3-201ENST00000265334 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
CDKL3-201ENST00000265334 ZKSCAN2Q63HK3 967 aa15.28■□□□□ 0.04
CDKL3-201ENST00000265334 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
CDKL3-201ENST00000265334 MARF1Q9Y4F3 1742 aaKnown RBP15.28■□□□□ 0.04
CDKL3-201ENST00000265334 IPO9Q96P70 1041 aaKnown RBP15.28■□□□□ 0.04
CDKL3-201ENST00000265334 ZNF853P0CG23 659 aa15.26■□□□□ 0.03
CDKL3-201ENST00000265334 TMEM94Q12767 1356 aa15.26■□□□□ 0.03
CDKL3-201ENST00000265334 KIF1AQ12756 1690 aa15.26■□□□□ 0.03
CDKL3-201ENST00000265334 MVPQ14764 893 aaKnown RBP15.26■□□□□ 0.03
CDKL3-201ENST00000265334 ESCO1Q5FWF5 840 aa15.26■□□□□ 0.03
CDKL3-201ENST00000265334 BRPF1P55201 1214 aaPredicted RBP15.25■□□□□ 0.03
CDKL3-201ENST00000265334 CALD1Q05682 793 aaKnown RBP15.25■□□□□ 0.03
CDKL3-201ENST00000265334 ALDH1L2Q3SY69 923 aa15.25■□□□□ 0.03
CDKL3-201ENST00000265334 DZIP1LQ8IYY4 767 aaKnown RBP15.25■□□□□ 0.03
CDKL3-201ENST00000265334 ZNF428Q96B54 188 aa15.25■□□□□ 0.03
CDKL3-201ENST00000265334 SMC4Q9NTJ3 1288 aa15.25■□□□□ 0.03
CDKL3-201ENST00000265334 PCDHB15Q9Y5E8 787 aa15.25■□□□□ 0.03
CDKL3-201ENST00000265334 C1orf167Q5SNV9 1468 aa15.25■□□□□ 0.03
CDKL3-201ENST00000265334 EIF4A2Q14240 407 aaKnown RBP15.25■□□□□ 0.03
CDKL3-201ENST00000265334 TRIM27P14373 513 aa15.24■□□□□ 0.03
CDKL3-201ENST00000265334 NLRP6P59044 892 aa15.24■□□□□ 0.03
CDKL3-201ENST00000265334 IFT57Q9NWB7 429 aa15.24■□□□□ 0.03
CDKL3-201ENST00000265334 KIF24Q5T7B8 1368 aa15.24■□□□□ 0.03
CDKL3-201ENST00000265334 NOP58Q9Y2X3 529 aaKnown RBP15.23■□□□□ 0.03
CDKL3-201ENST00000265334 VIRMAQ69YN4 1812 aaKnown RBP15.23■□□□□ 0.03
CDKL3-201ENST00000265334 ATF7IPQ6VMQ6 1270 aa15.23■□□□□ 0.03
CDKL3-201ENST00000265334 SBNO1A3KN83 1393 aa15.23■□□□□ 0.03
CDKL3-201ENST00000265334 GNAI1P63096 354 aa15.22■□□□□ 0.03
CDKL3-201ENST00000265334 PSME1Q06323 249 aa15.22■□□□□ 0.03
CDKL3-201ENST00000265334 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
CDKL3-201ENST00000265334 FAM161AQ3B820 660 aa15.22■□□□□ 0.03
CDKL3-201ENST00000265334 C8orf34Q49A92 452 aa15.22■□□□□ 0.03
CDKL3-201ENST00000265334 ABTB2Q8N961 1025 aa15.22■□□□□ 0.03
CDKL3-201ENST00000265334 ORAI2Q96SN7 254 aa15.22■□□□□ 0.03
CDKL3-201ENST00000265334 MST1RQ04912 1400 aa15.22■□□□□ 0.03
CDKL3-201ENST00000265334 MAP3K19Q56UN5 1328 aa15.22■□□□□ 0.03
CDKL3-201ENST00000265334 FLT4P35916 1363 aa15.22■□□□□ 0.03
CDKL3-201ENST00000265334 THUMPD2Q9BTF0 503 aaKnown RBP15.22■□□□□ 0.03
CDKL3-201ENST00000265334 KIF16BQ96L93 1317 aa15.21■□□□□ 0.03
CDKL3-201ENST00000265334 NOB1Q9ULX3 412 aaKnown RBP15.21■□□□□ 0.03
CDKL3-201ENST00000265334 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.03
CDKL3-201ENST00000265334 VAMP4O75379 141 aa15.2■□□□□ 0.02
CDKL3-201ENST00000265334 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
CDKL3-201ENST00000265334 ATF3P18847 181 aa15.2■□□□□ 0.02
CDKL3-201ENST00000265334 TRPM3Q9HCF6 1732 aaPredicted RBP15.2■□□□□ 0.02
CDKL3-201ENST00000265334 HSP90AB2PQ58FF8 381 aa15.2■□□□□ 0.02
CDKL3-201ENST00000265334 AEBP1Q8IUX7 1158 aa15.2■□□□□ 0.02
CDKL3-201ENST00000265334 FTSJ3Q8IY81 847 aaKnown RBP15.2■□□□□ 0.02
CDKL3-201ENST00000265334 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
CDKL3-201ENST00000265334 IPO8O15397 1037 aaKnown RBP15.19■□□□□ 0.02
CDKL3-201ENST00000265334 RGS3P49796 1198 aa15.19■□□□□ 0.02
CDKL3-201ENST00000265334 ERICH6Q7L0X2 663 aa15.19■□□□□ 0.02
CDKL3-201ENST00000265334 CADPS2Q86UW7 1296 aa15.19■□□□□ 0.02
CDKL3-201ENST00000265334 MBIPQ9NS73 344 aa15.19■□□□□ 0.02
CDKL3-201ENST00000265334 SULT6B1Q6IMI4 303 aa15.19■□□□□ 0.02
CDKL3-201ENST00000265334 DDX19BQ9UMR2 479 aa15.19■□□□□ 0.02
CDKL3-201ENST00000265334 FOXO3O43524 673 aa15.18■□□□□ 0.02
CDKL3-201ENST00000265334 RWDD1Q9H446 243 aaPredicted RBP15.18■□□□□ 0.02
CDKL3-201ENST00000265334 ARHGEF10O15013 1369 aa15.18■□□□□ 0.02
CDKL3-201ENST00000265334 MSH6P52701 1360 aa15.18■□□□□ 0.02
CDKL3-201ENST00000265334 NFAT5O94916 1531 aa15.17■□□□□ 0.02
CDKL3-201ENST00000265334 LAS1LQ9Y4W2 734 aaKnown RBP15.17■□□□□ 0.02
CDKL3-201ENST00000265334 RTL1A6NKG5 1358 aa15.17■□□□□ 0.02
CDKL3-201ENST00000265334 MRPL50Q8N5N7 158 aaKnown RBP15.17■□□□□ 0.02
CDKL3-201ENST00000265334 TSPYL6Q8N831 410 aa15.17■□□□□ 0.02
CDKL3-201ENST00000265334 ARHGAP45Q92619 1136 aa15.17■□□□□ 0.02
CDKL3-201ENST00000265334 PHRF1Q9P1Y6 1649 aaKnown RBP15.16■□□□□ 0.02
CDKL3-201ENST00000265334 SOX12O15370 315 aa15.16■□□□□ 0.02
CDKL3-201ENST00000265334 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
CDKL3-201ENST00000265334 TMEM57Q8N5G2 664 aa15.16■□□□□ 0.02
CDKL3-201ENST00000265334 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
CDKL3-201ENST00000265334 KDRP35968 1356 aa15.16■□□□□ 0.02
CDKL3-201ENST00000265334 FAM83GA6ND36 823 aa15.16■□□□□ 0.02
CDKL3-201ENST00000265334 AMPHP49418 695 aa15.16■□□□□ 0.02
CDKL3-201ENST00000265334 HDAC1Q13547 482 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms