RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 FLT4P35916 1363 aa13.03□□□□□ -0.32
SEC22C-201ENST00000264454 CT47B1P0C2W7 299 aaPredicted RBP13.02□□□□□ -0.33
SEC22C-201ENST00000264454 RIPK4P57078 832 aa13.02□□□□□ -0.33
SEC22C-201ENST00000264454 CALD1Q05682 793 aaKnown RBP13.02□□□□□ -0.33
SEC22C-201ENST00000264454 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.33
SEC22C-201ENST00000264454 KCNH5Q8NCM2 988 aa13.02□□□□□ -0.33
SEC22C-201ENST00000264454 TMEM94Q12767 1356 aa13.02□□□□□ -0.33
SEC22C-201ENST00000264454 C1orf167Q5SNV9 1468 aa13.02□□□□□ -0.33
SEC22C-201ENST00000264454 PIK3C2AO00443 1686 aa13.02□□□□□ -0.33
SEC22C-201ENST00000264454 AMPHP49418 695 aa13.01□□□□□ -0.33
SEC22C-201ENST00000264454 LMOD3Q0VAK6 560 aa13.01□□□□□ -0.33
SEC22C-201ENST00000264454 EIF4A2Q14240 407 aaKnown RBP13.01□□□□□ -0.33
SEC22C-201ENST00000264454 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
SEC22C-201ENST00000264454 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
SEC22C-201ENST00000264454 KIF1AQ12756 1690 aa13□□□□□ -0.33
SEC22C-201ENST00000264454 NFE2L2Q16236 605 aa13□□□□□ -0.33
SEC22C-201ENST00000264454 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
SEC22C-201ENST00000264454 RTL1A6NKG5 1358 aa12.99□□□□□ -0.33
SEC22C-201ENST00000264454 MSH6P52701 1360 aa12.99□□□□□ -0.33
SEC22C-201ENST00000264454 HMOX1P09601 288 aa12.99□□□□□ -0.33
SEC22C-201ENST00000264454 ORAI2Q96SN7 254 aa12.99□□□□□ -0.33
SEC22C-201ENST00000264454 ARHGEF10O15013 1369 aa12.98□□□□□ -0.33
SEC22C-201ENST00000264454 FOXO3O43524 673 aa12.98□□□□□ -0.33
SEC22C-201ENST00000264454 HSP90AB2PQ58FF8 381 aa12.98□□□□□ -0.33
SEC22C-201ENST00000264454 MST1RQ04912 1400 aa12.98□□□□□ -0.33
SEC22C-201ENST00000264454 KRT28Q7Z3Y7 464 aa12.97□□□□□ -0.33
SEC22C-201ENST00000264454 HOXC9P31274 260 aa12.96□□□□□ -0.33
SEC22C-201ENST00000264454 SULT6B1Q6IMI4 303 aa12.96□□□□□ -0.33
SEC22C-201ENST00000264454 PEAK1Q9H792 1746 aa12.96□□□□□ -0.33
SEC22C-201ENST00000264454 STRCP1A6NGW2 1772 aa12.96□□□□□ -0.34
SEC22C-201ENST00000264454 SOX12O15370 315 aa12.95□□□□□ -0.34
SEC22C-201ENST00000264454 IP6K1Q92551 441 aa12.95□□□□□ -0.34
SEC22C-201ENST00000264454 PHACTR3Q96KR7 559 aa12.95□□□□□ -0.34
SEC22C-201ENST00000264454 NPHP3Q7Z494 1330 aa12.95□□□□□ -0.34
SEC22C-201ENST00000264454 NUTM2GQ5VZR2 741 aa12.94□□□□□ -0.34
SEC22C-201ENST00000264454 KDRP35968 1356 aa12.94□□□□□ -0.34
SEC22C-201ENST00000264454 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
SEC22C-201ENST00000264454 GNAI1P63096 354 aa12.94□□□□□ -0.34
SEC22C-201ENST00000264454 ZNF428Q96B54 188 aa12.94□□□□□ -0.34
SEC22C-201ENST00000264454 CCDC136Q96JN2 1154 aa12.94□□□□□ -0.34
SEC22C-201ENST00000264454 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
SEC22C-201ENST00000264454 MARF1Q9Y4F3 1742 aaKnown RBP12.93□□□□□ -0.34
SEC22C-201ENST00000264454 USP19O94966 1318 aa12.93□□□□□ -0.34
SEC22C-201ENST00000264454 FANCIQ9NVI1 1328 aa12.93□□□□□ -0.34
SEC22C-201ENST00000264454 GCP02774 474 aa12.93□□□□□ -0.34
SEC22C-201ENST00000264454 PDE3AQ14432 1141 aa12.93□□□□□ -0.34
SEC22C-201ENST00000264454 IFT57Q9NWB7 429 aa12.93□□□□□ -0.34
SEC22C-201ENST00000264454 PLIN1O60240 522 aa12.92□□□□□ -0.34
SEC22C-201ENST00000264454 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
SEC22C-201ENST00000264454 EXOC6Q8TAG9 804 aa12.92□□□□□ -0.34
SEC22C-201ENST00000264454 EYA1Q99502 592 aa12.92□□□□□ -0.34
SEC22C-201ENST00000264454 SLIT3O75094 1523 aa12.92□□□□□ -0.34
SEC22C-201ENST00000264454 NFAT5O94916 1531 aa12.92□□□□□ -0.34
SEC22C-201ENST00000264454 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
SEC22C-201ENST00000264454 HTATSF1O43719 755 aaKnown RBP12.91□□□□□ -0.34
SEC22C-201ENST00000264454 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
SEC22C-201ENST00000264454 AEBP1Q8IUX7 1158 aa12.91□□□□□ -0.34
SEC22C-201ENST00000264454 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
SEC22C-201ENST00000264454 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
SEC22C-201ENST00000264454 BCAR3O75815 825 aa12.9□□□□□ -0.34
SEC22C-201ENST00000264454 ZNF853P0CG23 659 aa12.9□□□□□ -0.34
SEC22C-201ENST00000264454 MS4A1P11836 297 aa12.9□□□□□ -0.34
SEC22C-201ENST00000264454 AAMPQ13685 434 aa12.9□□□□□ -0.34
SEC22C-201ENST00000264454 B4GALNT3Q6L9W6 998 aa12.9□□□□□ -0.34
SEC22C-201ENST00000264454 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
SEC22C-201ENST00000264454 EXOSC9Q06265 439 aaKnown RBP12.89□□□□□ -0.35
SEC22C-201ENST00000264454 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
SEC22C-201ENST00000264454 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
SEC22C-201ENST00000264454 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
SEC22C-201ENST00000264454 XPCQ01831 940 aaPredicted RBP12.88□□□□□ -0.35
SEC22C-201ENST00000264454 ALDH1L2Q3SY69 923 aa12.88□□□□□ -0.35
SEC22C-201ENST00000264454 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
SEC22C-201ENST00000264454 CRBNQ96SW2 442 aa12.88□□□□□ -0.35
SEC22C-201ENST00000264454 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
SEC22C-201ENST00000264454 SLAIN2Q9P270 581 aa12.87□□□□□ -0.35
SEC22C-201ENST00000264454 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
SEC22C-201ENST00000264454 ALS2Q96Q42 1657 aa12.87□□□□□ -0.35
SEC22C-201ENST00000264454 LTN1O94822 1766 aa12.86□□□□□ -0.35
SEC22C-201ENST00000264454 TNS3Q68CZ2 1445 aa12.86□□□□□ -0.35
SEC22C-201ENST00000264454 XIRP1Q702N8 1843 aaKnown RBP12.86□□□□□ -0.35
SEC22C-201ENST00000264454 SPATA31A3Q5VYP0 1347 aa12.86□□□□□ -0.35
SEC22C-201ENST00000264454 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
SEC22C-201ENST00000264454 MTHFSDQ2M296 383 aaKnown RBP12.85□□□□□ -0.35
SEC22C-201ENST00000264454 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
SEC22C-201ENST00000264454 BRINP3Q76B58 766 aa12.85□□□□□ -0.35
SEC22C-201ENST00000264454 LAS1LQ9Y4W2 734 aaKnown RBP12.85□□□□□ -0.35
SEC22C-201ENST00000264454 IPO8O15397 1037 aaKnown RBP12.84□□□□□ -0.35
SEC22C-201ENST00000264454 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
SEC22C-201ENST00000264454 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
SEC22C-201ENST00000264454 PXDNQ92626 1479 aa12.84□□□□□ -0.35
SEC22C-201ENST00000264454 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
SEC22C-201ENST00000264454 GNAT3A8MTJ3 354 aa12.83□□□□□ -0.36
SEC22C-201ENST00000264454 CHL1O00533 1208 aa12.83□□□□□ -0.36
SEC22C-201ENST00000264454 FRAT1Q92837 279 aaPredicted RBP12.83□□□□□ -0.36
SEC22C-201ENST00000264454 MBIPQ9NS73 344 aa12.83□□□□□ -0.36
SEC22C-201ENST00000264454 SMC4Q9NTJ3 1288 aa12.83□□□□□ -0.36
SEC22C-201ENST00000264454 BABAM1Q9NWV8 329 aa12.83□□□□□ -0.36
SEC22C-201ENST00000264454 KIF16BQ96L93 1317 aa12.83□□□□□ -0.36
SEC22C-201ENST00000264454 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
SEC22C-201ENST00000264454 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms