RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PNNQ9H307 717 aaKnown RBP17.51■□□□□ 0.39
VMP1-201ENST00000262291 NFE2L2Q16236 605 aa17.5■□□□□ 0.39
VMP1-201ENST00000262291 NLRP6P59044 892 aa17.5■□□□□ 0.39
VMP1-201ENST00000262291 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
VMP1-201ENST00000262291 ADAMTSL3P82987 1691 aa17.5■□□□□ 0.39
VMP1-201ENST00000262291 ELL2O00472 640 aaPredicted RBP17.49■□□□□ 0.39
VMP1-201ENST00000262291 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
VMP1-201ENST00000262291 OVOS2A0A0J9YW53 1432 aa17.49■□□□□ 0.39
VMP1-201ENST00000262291 OVOS2Q6IE36 1432 aa17.49■□□□□ 0.39
VMP1-201ENST00000262291 SMC4Q9NTJ3 1288 aa17.49■□□□□ 0.39
VMP1-201ENST00000262291 NRKQ7Z2Y5 1582 aa17.49■□□□□ 0.39
VMP1-201ENST00000262291 MAP3K19Q56UN5 1328 aa17.49■□□□□ 0.39
VMP1-201ENST00000262291 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
VMP1-201ENST00000262291 XPCQ01831 940 aaPredicted RBP17.48■□□□□ 0.39
VMP1-201ENST00000262291 KDM2BQ8NHM5 1336 aa17.47■□□□□ 0.39
VMP1-201ENST00000262291 IGHDP01880 384 aa17.47■□□□□ 0.39
VMP1-201ENST00000262291 SSH2Q76I76 1423 aa17.47■□□□□ 0.39
VMP1-201ENST00000262291 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.39
VMP1-201ENST00000262291 ABTB2Q8N961 1025 aa17.46■□□□□ 0.39
VMP1-201ENST00000262291 AMPHP49418 695 aa17.46■□□□□ 0.39
VMP1-201ENST00000262291 PDE3AQ14432 1141 aa17.46■□□□□ 0.39
VMP1-201ENST00000262291 ESCO1Q5FWF5 840 aa17.46■□□□□ 0.39
VMP1-201ENST00000262291 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
VMP1-201ENST00000262291 RGS3P49796 1198 aa17.45■□□□□ 0.38
VMP1-201ENST00000262291 PEAK1Q9H792 1746 aa17.45■□□□□ 0.38
VMP1-201ENST00000262291 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
VMP1-201ENST00000262291 TSPYL6Q8N831 410 aa17.44■□□□□ 0.38
VMP1-201ENST00000262291 PHF8Q9UPP1 1060 aa17.44■□□□□ 0.38
VMP1-201ENST00000262291 TTC21AQ8NDW8 1320 aa17.43■□□□□ 0.38
VMP1-201ENST00000262291 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
VMP1-201ENST00000262291 CENPQQ7L2Z9 268 aaPredicted RBP17.43■□□□□ 0.38
VMP1-201ENST00000262291 NPM2Q86SE8 214 aaKnown RBP17.43■□□□□ 0.38
VMP1-201ENST00000262291 NOB1Q9ULX3 412 aaKnown RBP17.43■□□□□ 0.38
VMP1-201ENST00000262291 SETD1BQ9UPS6 1966 aaKnown RBP17.43■□□□□ 0.38
VMP1-201ENST00000262291 MCM10Q7L590 875 aa17.42■□□□□ 0.38
VMP1-201ENST00000262291 NPHP4O75161 1426 aaPredicted RBP17.42■□□□□ 0.38
VMP1-201ENST00000262291 IL16Q14005 1332 aa17.42■□□□□ 0.38
VMP1-201ENST00000262291 FTSJ3Q8IY81 847 aaKnown RBP17.42■□□□□ 0.38
VMP1-201ENST00000262291 PIK3R4Q99570 1358 aa17.42■□□□□ 0.38
VMP1-201ENST00000262291 NALCNQ8IZF0 1738 aa17.42■□□□□ 0.38
VMP1-201ENST00000262291 USP31Q70CQ4 1352 aa17.42■□□□□ 0.38
VMP1-201ENST00000262291 FOXO3O43524 673 aa17.41■□□□□ 0.38
VMP1-201ENST00000262291 ZKSCAN2Q63HK3 967 aa17.41■□□□□ 0.38
VMP1-201ENST00000262291 ORAI2Q96SN7 254 aa17.41■□□□□ 0.38
VMP1-201ENST00000262291 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
VMP1-201ENST00000262291 CHD2O14647 1828 aaKnown RBP17.41■□□□□ 0.38
VMP1-201ENST00000262291 TRIM27P14373 513 aa17.41■□□□□ 0.38
VMP1-201ENST00000262291 PCDHB15Q9Y5E8 787 aa17.41■□□□□ 0.38
VMP1-201ENST00000262291 PDE4AP27815 886 aa17.4■□□□□ 0.38
VMP1-201ENST00000262291 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
VMP1-201ENST00000262291 PIK3C2AO00443 1686 aa17.4■□□□□ 0.38
VMP1-201ENST00000262291 ZNF142P52746 1687 aaPredicted RBP17.4■□□□□ 0.38
VMP1-201ENST00000262291 FMN2Q9NZ56 1722 aa17.39■□□□□ 0.37
VMP1-201ENST00000262291 PSME1Q06323 249 aa17.39■□□□□ 0.37
VMP1-201ENST00000262291 KRT24Q2M2I5 525 aa17.39■□□□□ 0.37
VMP1-201ENST00000262291 DZIP1LQ8IYY4 767 aaKnown RBP17.39■□□□□ 0.37
VMP1-201ENST00000262291 HSPA2P54652 639 aa17.39■□□□□ 0.37
VMP1-201ENST00000262291 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
VMP1-201ENST00000262291 PROSER2Q86WR7 435 aaPredicted RBP17.38■□□□□ 0.37
VMP1-201ENST00000262291 EYA1Q99502 592 aa17.38■□□□□ 0.37
VMP1-201ENST00000262291 MIS18AQ9NYP9 233 aa17.38■□□□□ 0.37
VMP1-201ENST00000262291 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
VMP1-201ENST00000262291 ITPRIPQ8IWB1 547 aa17.38■□□□□ 0.37
VMP1-201ENST00000262291 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
VMP1-201ENST00000262291 C8orf58Q8NAV2 365 aa17.38■□□□□ 0.37
VMP1-201ENST00000262291 FLT4P35916 1363 aa17.36■□□□□ 0.37
VMP1-201ENST00000262291 GNAI1P63096 354 aa17.36■□□□□ 0.37
VMP1-201ENST00000262291 MVPQ14764 893 aaKnown RBP17.36■□□□□ 0.37
VMP1-201ENST00000262291 VAMP4O75379 141 aa17.35■□□□□ 0.37
VMP1-201ENST00000262291 ATF7IPQ6VMQ6 1270 aa17.35■□□□□ 0.37
VMP1-201ENST00000262291 TMEM57Q8N5G2 664 aa17.35■□□□□ 0.37
VMP1-201ENST00000262291 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
VMP1-201ENST00000262291 HOXC9P31274 260 aa17.35■□□□□ 0.37
VMP1-201ENST00000262291 MTHFSDQ2M296 383 aaKnown RBP17.35■□□□□ 0.37
VMP1-201ENST00000262291 IFT57Q9NWB7 429 aa17.35■□□□□ 0.37
VMP1-201ENST00000262291 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
VMP1-201ENST00000262291 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
VMP1-201ENST00000262291 BACH2Q9BYV9 841 aa17.34■□□□□ 0.37
VMP1-201ENST00000262291 ADGRL3Q9HAR2 1447 aa17.34■□□□□ 0.37
VMP1-201ENST00000262291 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
VMP1-201ENST00000262291 UBE2Q2Q8WVN8 375 aa17.34■□□□□ 0.37
VMP1-201ENST00000262291 TWISTNBQ3B726 338 aaPredicted RBP17.33■□□□□ 0.36
VMP1-201ENST00000262291 DDX17Q92841 729 aaKnown RBP17.33■□□□□ 0.36
VMP1-201ENST00000262291 CFAP44Q96MT7 982 aa17.33■□□□□ 0.36
VMP1-201ENST00000262291 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
VMP1-201ENST00000262291 MS4A1P11836 297 aa17.31■□□□□ 0.36
VMP1-201ENST00000262291 MRPL50Q8N5N7 158 aaKnown RBP17.3■□□□□ 0.36
VMP1-201ENST00000262291 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
VMP1-201ENST00000262291 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
VMP1-201ENST00000262291 IPO9Q96P70 1041 aaKnown RBP17.29■□□□□ 0.36
VMP1-201ENST00000262291 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
VMP1-201ENST00000262291 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
VMP1-201ENST00000262291 EIF5BO60841 1220 aaKnown RBP17.28■□□□□ 0.36
VMP1-201ENST00000262291 IGSF1Q8N6C5 1336 aa17.28■□□□□ 0.36
VMP1-201ENST00000262291 KIF16BQ96L93 1317 aa17.28■□□□□ 0.36
VMP1-201ENST00000262291 ALDH1L2Q3SY69 923 aa17.28■□□□□ 0.36
VMP1-201ENST00000262291 C1orf115Q9H7X2 142 aa17.28■□□□□ 0.36
VMP1-201ENST00000262291 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.36
VMP1-201ENST00000262291 IPO8O15397 1037 aaKnown RBP17.27■□□□□ 0.36
VMP1-201ENST00000262291 RTF1Q92541 710 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms