RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 FOXD4L3Q6VB84 417 aaPredicted RBP17.19■□□□□ 0.34
LIMD2-201ENST00000259006 NEO1Q92859 1461 aa17.18■□□□□ 0.34
LIMD2-201ENST00000259006 LETM1O95202 739 aaPredicted RBP17.18■□□□□ 0.34
LIMD2-201ENST00000259006 RAB3GAP1Q15042 981 aa17.18■□□□□ 0.34
LIMD2-201ENST00000259006 KIF2CQ99661 725 aa17.18■□□□□ 0.34
LIMD2-201ENST00000259006 IRX3P78415 501 aaPredicted RBP17.18■□□□□ 0.34
LIMD2-201ENST00000259006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.34
LIMD2-201ENST00000259006 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
LIMD2-201ENST00000259006 JARID2Q92833 1246 aaPredicted RBP17.17■□□□□ 0.34
LIMD2-201ENST00000259006 GTPBP4Q9BZE4 634 aaKnown RBP17.17■□□□□ 0.34
LIMD2-201ENST00000259006 INO80Q9ULG1 1556 aaPredicted RBP17.17■□□□□ 0.34
LIMD2-201ENST00000259006 GOLGA6L22H0YM25 854 aa17.17■□□□□ 0.34
LIMD2-201ENST00000259006 MINK1Q8N4C8 1332 aaPredicted RBP17.16■□□□□ 0.34
LIMD2-201ENST00000259006 IPO8O15397 1037 aaKnown RBP17.16■□□□□ 0.34
LIMD2-201ENST00000259006 C16orf71Q8IYS4 520 aaPredicted RBP17.16■□□□□ 0.34
LIMD2-201ENST00000259006 RBM25P49756 843 aaKnown RBP17.16■□□□□ 0.34
LIMD2-201ENST00000259006 TSPYL6Q8N831 410 aa17.16■□□□□ 0.34
LIMD2-201ENST00000259006 RBM27Q9P2N5 1060 aaKnown RBP17.16■□□□□ 0.34
LIMD2-201ENST00000259006 DYNC1I1O14576 645 aa17.16■□□□□ 0.34
LIMD2-201ENST00000259006 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
LIMD2-201ENST00000259006 TERF1P54274 439 aa17.16■□□□□ 0.34
LIMD2-201ENST00000259006 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
LIMD2-201ENST00000259006 TSC1Q92574 1164 aa17.16■□□□□ 0.34
LIMD2-201ENST00000259006 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
LIMD2-201ENST00000259006 AK9Q5TCS8 1911 aa17.15■□□□□ 0.34
LIMD2-201ENST00000259006 CEP152O94986 1710 aa17.15■□□□□ 0.34
LIMD2-201ENST00000259006 ZBTB9Q96C00 473 aa17.14■□□□□ 0.33
LIMD2-201ENST00000259006 MLH3Q9UHC1 1453 aa17.14■□□□□ 0.33
LIMD2-201ENST00000259006 DIP2BQ9P265 1576 aa17.14■□□□□ 0.33
LIMD2-201ENST00000259006 BAG4O95429 457 aaKnown RBP17.14■□□□□ 0.33
LIMD2-201ENST00000259006 DDIT3P35638 169 aa17.13■□□□□ 0.33
LIMD2-201ENST00000259006 RNF214Q8ND24 703 aa17.13■□□□□ 0.33
LIMD2-201ENST00000259006 SPDYE4A6NLX3 237 aa17.12■□□□□ 0.33
LIMD2-201ENST00000259006 PRPF40AO75400 957 aaKnown RBP17.12■□□□□ 0.33
LIMD2-201ENST00000259006 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
LIMD2-201ENST00000259006 SNX21Q969T3 373 aa17.12■□□□□ 0.33
LIMD2-201ENST00000259006 HECW2Q9P2P5 1572 aa17.12■□□□□ 0.33
LIMD2-201ENST00000259006 IDI1Q13907 227 aa17.12■□□□□ 0.33
LIMD2-201ENST00000259006 PLEKHF1Q96S99 279 aa17.12■□□□□ 0.33
LIMD2-201ENST00000259006 CCDC173Q0VFZ6 552 aa17.11■□□□□ 0.33
LIMD2-201ENST00000259006 SKOR2Q2VWA4 1001 aaPredicted RBP17.11■□□□□ 0.33
LIMD2-201ENST00000259006 EVC2Q86UK5 1308 aa17.11■□□□□ 0.33
LIMD2-201ENST00000259006 DIAPH1O60610 1272 aaKnown RBP17.11■□□□□ 0.33
LIMD2-201ENST00000259006 RGS22Q8NE09 1264 aa17.11■□□□□ 0.33
LIMD2-201ENST00000259006 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
LIMD2-201ENST00000259006 BMP2KLQ5H9B9 411 aa17.1■□□□□ 0.33
LIMD2-201ENST00000259006 ZNF771Q7L3S4 317 aaPredicted RBP17.1■□□□□ 0.33
LIMD2-201ENST00000259006 ZGPATQ8N5A5 531 aaKnown RBP17.1■□□□□ 0.33
LIMD2-201ENST00000259006 IQSEC2Q5JU85 1478 aa17.1■□□□□ 0.33
LIMD2-201ENST00000259006 TRPM2O94759 1503 aa17.1■□□□□ 0.33
LIMD2-201ENST00000259006 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
LIMD2-201ENST00000259006 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
LIMD2-201ENST00000259006 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
LIMD2-201ENST00000259006 KCNJ4P48050 445 aa17.1■□□□□ 0.33
LIMD2-201ENST00000259006 DCTN1Q14203 1278 aa17.09■□□□□ 0.33
LIMD2-201ENST00000259006 SIRT2Q8IXJ6 389 aa17.09■□□□□ 0.33
LIMD2-201ENST00000259006 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
LIMD2-201ENST00000259006 PHACTR3Q96KR7 559 aa17.09■□□□□ 0.33
LIMD2-201ENST00000259006 NPATQ14207 1427 aa17.09■□□□□ 0.33
LIMD2-201ENST00000259006 SPHKAPQ2M3C7 1700 aa17.09■□□□□ 0.33
LIMD2-201ENST00000259006 C14orf93Q9H972 538 aaKnown RBP17.09■□□□□ 0.33
LIMD2-201ENST00000259006 CFAP74Q9C0B2 1584 aa17.09■□□□□ 0.33
LIMD2-201ENST00000259006 ZBTB7BO15156 539 aaPredicted RBP17.08■□□□□ 0.33
LIMD2-201ENST00000259006 IRX5P78411 483 aaPredicted RBP17.08■□□□□ 0.33
LIMD2-201ENST00000259006 ATP2B3Q16720 1220 aa17.08■□□□□ 0.33
LIMD2-201ENST00000259006 FAM177BA6PVY3 158 aa17.08■□□□□ 0.32
LIMD2-201ENST00000259006 RBSNQ9H1K0 784 aa17.08■□□□□ 0.32
LIMD2-201ENST00000259006 MAP3K4Q9Y6R4 1608 aa17.08■□□□□ 0.32
LIMD2-201ENST00000259006 PRIM1P49642 420 aaKnown RBP17.08■□□□□ 0.32
LIMD2-201ENST00000259006 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
LIMD2-201ENST00000259006 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
LIMD2-201ENST00000259006 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
LIMD2-201ENST00000259006 FYB1O15117 783 aa17.07■□□□□ 0.32
LIMD2-201ENST00000259006 FAM83GA6ND36 823 aa17.07■□□□□ 0.32
LIMD2-201ENST00000259006 GSPT1P15170 499 aaKnown RBP17.07■□□□□ 0.32
LIMD2-201ENST00000259006 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
LIMD2-201ENST00000259006 PPIP5K1Q6PFW1 1433 aa17.06■□□□□ 0.32
LIMD2-201ENST00000259006 CHRM1P11229 460 aaPredicted RBP17.05■□□□□ 0.32
LIMD2-201ENST00000259006 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
LIMD2-201ENST00000259006 CDC45O75419 566 aa17.05■□□□□ 0.32
LIMD2-201ENST00000259006 SYCE3A1L190 88 aa17.05■□□□□ 0.32
LIMD2-201ENST00000259006 ISY1Q9ULR0 285 aaKnown RBP17.05■□□□□ 0.32
LIMD2-201ENST00000259006 KRT24Q2M2I5 525 aa17.04■□□□□ 0.32
LIMD2-201ENST00000259006 KLHL40Q2TBA0 621 aa17.04■□□□□ 0.32
LIMD2-201ENST00000259006 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
LIMD2-201ENST00000259006 TAF3Q5VWG9 929 aa17.04■□□□□ 0.32
LIMD2-201ENST00000259006 SASS6Q6UVJ0 657 aa17.04■□□□□ 0.32
LIMD2-201ENST00000259006 NSFL1CQ9UNZ2 370 aaKnown RBP17.04■□□□□ 0.32
LIMD2-201ENST00000259006 A0A1W2PP64 1363 aa17.04■□□□□ 0.32
LIMD2-201ENST00000259006 CT47B1P0C2W7 299 aaPredicted RBP17.03■□□□□ 0.32
LIMD2-201ENST00000259006 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
LIMD2-201ENST00000259006 ZMYM3Q14202 1370 aa17.03■□□□□ 0.32
LIMD2-201ENST00000259006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.03■□□□□ 0.32
LIMD2-201ENST00000259006 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
LIMD2-201ENST00000259006 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
LIMD2-201ENST00000259006 CABP1Q9NZU7 370 aa17.03■□□□□ 0.32
LIMD2-201ENST00000259006 DTNBO60941 627 aa17.02■□□□□ 0.32
LIMD2-201ENST00000259006 VAMP4O75379 141 aa17.02■□□□□ 0.32
LIMD2-201ENST00000259006 C8orf58Q8NAV2 365 aa17.02■□□□□ 0.32
LIMD2-201ENST00000259006 MROH1Q8NDA8 1641 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms