RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 AMPHP49418 695 aa24.73■■□□□ 1.55
TRIM47-201ENST00000254816 PHACTR3Q96KR7 559 aa24.73■■□□□ 1.55
TRIM47-201ENST00000254816 SBNO1A3KN83 1393 aa24.73■■□□□ 1.55
TRIM47-201ENST00000254816 MSH6P52701 1360 aa24.73■■□□□ 1.55
TRIM47-201ENST00000254816 RRP1P56182 461 aaKnown RBP24.72■■□□□ 1.55
TRIM47-201ENST00000254816 KRT28Q7Z3Y7 464 aa24.72■■□□□ 1.55
TRIM47-201ENST00000254816 DDX17Q92841 729 aaKnown RBP24.72■■□□□ 1.55
TRIM47-201ENST00000254816 RGPD1P0DJD0 1748 aa24.71■■□□□ 1.55
TRIM47-201ENST00000254816 FLT4P35916 1363 aa24.71■■□□□ 1.55
TRIM47-201ENST00000254816 RIPK4P57078 832 aa24.71■■□□□ 1.55
TRIM47-201ENST00000254816 TRIM35Q9UPQ4 493 aa24.71■■□□□ 1.55
TRIM47-201ENST00000254816 LMOD2Q6P5Q4 547 aa24.7■■□□□ 1.55
TRIM47-201ENST00000254816 CADPS2Q86UW7 1296 aa24.7■■□□□ 1.55
TRIM47-201ENST00000254816 WDR63Q8IWG1 891 aa24.7■■□□□ 1.55
TRIM47-201ENST00000254816 DLG5Q8TDM6 1919 aa24.7■■□□□ 1.54
TRIM47-201ENST00000254816 AEBP1Q8IUX7 1158 aa24.7■■□□□ 1.54
TRIM47-201ENST00000254816 NEFMP07197 916 aa24.69■■□□□ 1.54
TRIM47-201ENST00000254816 NCBP3Q53F19 620 aaKnown RBP24.69■■□□□ 1.54
TRIM47-201ENST00000254816 SULT6B1Q6IMI4 303 aa24.68■■□□□ 1.54
TRIM47-201ENST00000254816 ERICH6BQ5W0A0 696 aa24.67■■□□□ 1.54
TRIM47-201ENST00000254816 PPP4R2Q9NY27 417 aa24.67■■□□□ 1.54
TRIM47-201ENST00000254816 NFAT5O94916 1531 aa24.67■■□□□ 1.54
TRIM47-201ENST00000254816 PLIN1O60240 522 aa24.66■■□□□ 1.54
TRIM47-201ENST00000254816 HOXC9P31274 260 aa24.66■■□□□ 1.54
TRIM47-201ENST00000254816 ALS2Q96Q42 1657 aa24.64■■□□□ 1.54
TRIM47-201ENST00000254816 ZBTB7CA1YPR0 619 aa24.64■■□□□ 1.53
TRIM47-201ENST00000254816 NFE2L2Q16236 605 aa24.64■■□□□ 1.53
TRIM47-201ENST00000254816 RBM19Q9Y4C8 960 aaKnown RBP24.62■■□□□ 1.53
TRIM47-201ENST00000254816 LTV1Q96GA3 475 aaPredicted RBP24.61■■□□□ 1.53
TRIM47-201ENST00000254816 B4GALNT3Q6L9W6 998 aa24.6■■□□□ 1.53
TRIM47-201ENST00000254816 KCNH5Q8NCM2 988 aa24.6■■□□□ 1.53
TRIM47-201ENST00000254816 KIF24Q5T7B8 1368 aa24.6■■□□□ 1.53
TRIM47-201ENST00000254816 SLIT3O75094 1523 aa24.6■■□□□ 1.53
TRIM47-201ENST00000254816 EYA1Q99502 592 aa24.6■■□□□ 1.53
TRIM47-201ENST00000254816 GCP02774 474 aa24.59■■□□□ 1.53
TRIM47-201ENST00000254816 TSR2Q969E8 191 aaKnown RBP24.59■■□□□ 1.53
TRIM47-201ENST00000254816 ARHGEF10O15013 1369 aa24.59■■□□□ 1.53
TRIM47-201ENST00000254816 MYH16Q9H6N6 1097 aa24.58■■□□□ 1.53
TRIM47-201ENST00000254816 THUMPD2Q9BTF0 503 aaKnown RBP24.58■■□□□ 1.52
TRIM47-201ENST00000254816 RTL1A6NKG5 1358 aa24.57■■□□□ 1.52
TRIM47-201ENST00000254816 RGPD2P0DJD1 1756 aa24.56■■□□□ 1.52
TRIM47-201ENST00000254816 NPHP3Q7Z494 1330 aa24.56■■□□□ 1.52
TRIM47-201ENST00000254816 BRINP3Q76B58 766 aa24.56■■□□□ 1.52
TRIM47-201ENST00000254816 IGSF1Q8N6C5 1336 aa24.56■■□□□ 1.52
TRIM47-201ENST00000254816 FANCIQ9NVI1 1328 aa24.56■■□□□ 1.52
TRIM47-201ENST00000254816 BCAR3O75815 825 aa24.56■■□□□ 1.52
TRIM47-201ENST00000254816 IP6K1Q92551 441 aa24.56■■□□□ 1.52
TRIM47-201ENST00000254816 USP19O94966 1318 aa24.55■■□□□ 1.52
TRIM47-201ENST00000254816 MED1Q15648 1581 aaPredicted RBP24.55■■□□□ 1.52
TRIM47-201ENST00000254816 PHRF1Q9P1Y6 1649 aaKnown RBP24.55■■□□□ 1.52
TRIM47-201ENST00000254816 PXDNQ92626 1479 aa24.54■■□□□ 1.52
TRIM47-201ENST00000254816 FAM83GA6ND36 823 aa24.54■■□□□ 1.52
TRIM47-201ENST00000254816 SLAIN2Q9P270 581 aa24.54■■□□□ 1.52
TRIM47-201ENST00000254816 RGPD5Q99666 1765 aa24.54■■□□□ 1.52
TRIM47-201ENST00000254816 EXOC6Q8TAG9 804 aa24.54■■□□□ 1.52
TRIM47-201ENST00000254816 IL16Q14005 1332 aa24.53■■□□□ 1.52
TRIM47-201ENST00000254816 C20orf194Q5TEA3 1177 aa24.53■■□□□ 1.52
TRIM47-201ENST00000254816 KDRP35968 1356 aa24.52■■□□□ 1.52
TRIM47-201ENST00000254816 DCTN1Q14203 1278 aa24.52■■□□□ 1.52
TRIM47-201ENST00000254816 ARHGEF25Q86VW2 580 aa24.52■■□□□ 1.52
TRIM47-201ENST00000254816 LAS1LQ9Y4W2 734 aaKnown RBP24.52■■□□□ 1.52
TRIM47-201ENST00000254816 USHBP1Q8N6Y0 703 aa24.51■■□□□ 1.51
TRIM47-201ENST00000254816 TNS3Q68CZ2 1445 aa24.51■■□□□ 1.51
TRIM47-201ENST00000254816 EXOSC9Q06265 439 aaKnown RBP24.5■■□□□ 1.51
TRIM47-201ENST00000254816 ZC3H6P61129 1189 aaKnown RBP24.49■■□□□ 1.51
TRIM47-201ENST00000254816 CABLES1Q8TDN4 633 aa24.49■■□□□ 1.51
TRIM47-201ENST00000254816 LMOD3Q0VAK6 560 aa24.47■■□□□ 1.51
TRIM47-201ENST00000254816 MTHFSDQ2M296 383 aaKnown RBP24.47■■□□□ 1.51
TRIM47-201ENST00000254816 CRBNQ96SW2 442 aa24.47■■□□□ 1.51
TRIM47-201ENST00000254816 SPATA31A3Q5VYP0 1347 aa24.47■■□□□ 1.51
TRIM47-201ENST00000254816 RARSP54136 660 aaKnown RBP24.47■■□□□ 1.51
TRIM47-201ENST00000254816 CRYBG1Q9Y4K1 1723 aa24.46■■□□□ 1.51
TRIM47-201ENST00000254816 NBPF6Q5VWK0 638 aa24.46■■□□□ 1.51
TRIM47-201ENST00000254816 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.46■■□□□ 1.51
TRIM47-201ENST00000254816 LRRC59Q96AG4 307 aaKnown RBP24.46■■□□□ 1.51
TRIM47-201ENST00000254816 NBPF4Q96M43 638 aa24.46■■□□□ 1.51
TRIM47-201ENST00000254816 BCL2L13Q9BXK5 485 aa24.46■■□□□ 1.51
TRIM47-201ENST00000254816 AXIN2Q9Y2T1 843 aa24.45■■□□□ 1.5
TRIM47-201ENST00000254816 MCM10Q7L590 875 aa24.45■■□□□ 1.5
TRIM47-201ENST00000254816 CALD1Q05682 793 aaKnown RBP24.44■■□□□ 1.5
TRIM47-201ENST00000254816 ANKRD24Q8TF21 1146 aa24.41■■□□□ 1.5
TRIM47-201ENST00000254816 CCDC136Q96JN2 1154 aa24.41■■□□□ 1.5
TRIM47-201ENST00000254816 IFT57Q9NWB7 429 aa24.41■■□□□ 1.5
TRIM47-201ENST00000254816 ZNF853P0CG23 659 aa24.41■■□□□ 1.5
TRIM47-201ENST00000254816 GNAI1P63096 354 aa24.41■■□□□ 1.5
TRIM47-201ENST00000254816 FRAT1Q92837 279 aaPredicted RBP24.41■■□□□ 1.5
TRIM47-201ENST00000254816 MBIPQ9NS73 344 aa24.41■■□□□ 1.5
TRIM47-201ENST00000254816 SOS2Q07890 1332 aaPredicted RBP24.4■■□□□ 1.5
TRIM47-201ENST00000254816 NHSL1Q5SYE7 1610 aa24.39■■□□□ 1.5
TRIM47-201ENST00000254816 COL18A1P39060 1754 aa24.39■■□□□ 1.5
TRIM47-201ENST00000254816 CANXP27824 592 aaKnown RBP24.39■■□□□ 1.5
TRIM47-201ENST00000254816 CFAP44Q96MT7 982 aa24.38■■□□□ 1.49
TRIM47-201ENST00000254816 GAS2L2Q8NHY3 880 aa24.38■■□□□ 1.49
TRIM47-201ENST00000254816 CT47B1P0C2W7 299 aaPredicted RBP24.37■■□□□ 1.49
TRIM47-201ENST00000254816 CHRNA2Q15822 529 aa24.36■■□□□ 1.49
TRIM47-201ENST00000254816 LTBP4Q8N2S1 1624 aa24.36■■□□□ 1.49
TRIM47-201ENST00000254816 RTF1Q92541 710 aaKnown RBP24.35■■□□□ 1.49
TRIM47-201ENST00000254816 TNNQ9UQP3 1299 aa24.35■■□□□ 1.49
TRIM47-201ENST00000254816 SSH1Q8WYL5 1049 aa24.35■■□□□ 1.49
TRIM47-201ENST00000254816 CAMTA1Q9Y6Y1 1673 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms