RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 DUOX2Q9NRD8 1548 aa21.96■■□□□ 1.11
EFR3A-201ENST00000254624 KLHL34Q8N239 644 aa21.96■■□□□ 1.11
EFR3A-201ENST00000254624 ASXL2Q76L83 1435 aa21.96■■□□□ 1.11
EFR3A-201ENST00000254624 ZC3H6P61129 1189 aaKnown RBP21.96■■□□□ 1.11
EFR3A-201ENST00000254624 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.96■■□□□ 1.113e-6■■■■□ 21.1
EFR3A-201ENST00000254624 MCM2P49736 904 aa21.96■■□□□ 1.11
EFR3A-201ENST00000254624 ANKRD20A12PQ8NF67 263 aa21.96■■□□□ 1.11
EFR3A-201ENST00000254624 LRPPRCP42704 1394 aaKnown RBP21.95■■□□□ 1.11
EFR3A-201ENST00000254624 AMOTQ4VCS5 1084 aa21.95■■□□□ 1.1
EFR3A-201ENST00000254624 C1orf115Q9H7X2 142 aa21.95■■□□□ 1.1
EFR3A-201ENST00000254624 UGGT2Q9NYU1 1516 aa21.94■■□□□ 1.1
EFR3A-201ENST00000254624 FYB1O15117 783 aa21.94■■□□□ 1.1
EFR3A-201ENST00000254624 TNRQ92752 1358 aa21.93■■□□□ 1.1
EFR3A-201ENST00000254624 MYL6BP14649 208 aa21.93■■□□□ 1.1
EFR3A-201ENST00000254624 SLFN5Q08AF3 891 aa21.93■■□□□ 1.1
EFR3A-201ENST00000254624 PIP4K2BP78356 416 aa21.92■■□□□ 1.1
EFR3A-201ENST00000254624 IFT57Q9NWB7 429 aa21.92■■□□□ 1.1
EFR3A-201ENST00000254624 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.92■■□□□ 1.1
EFR3A-201ENST00000254624 CCDC57Q2TAC2 916 aa21.91■■□□□ 1.1
EFR3A-201ENST00000254624 CTTNBP2Q8WZ74 1663 aa21.91■■□□□ 1.1
EFR3A-201ENST00000254624 CCDC73Q6ZRK6 1079 aa21.91■■□□□ 1.1
EFR3A-201ENST00000254624 DMRT2Q9Y5R5 561 aa21.91■■□□□ 1.1
EFR3A-201ENST00000254624 WDR7Q9Y4E6 1490 aa21.91■■□□□ 1.1
EFR3A-201ENST00000254624 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
EFR3A-201ENST00000254624 STARD3NLO95772 234 aa21.9■■□□□ 1.1
EFR3A-201ENST00000254624 RABEP1Q15276 862 aa21.9■■□□□ 1.1
EFR3A-201ENST00000254624 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
EFR3A-201ENST00000254624 ZNF518AQ6AHZ1 1483 aa21.9■■□□□ 1.1
EFR3A-201ENST00000254624 GSE1Q14687 1217 aa21.9■■□□□ 1.1
EFR3A-201ENST00000254624 RPAP2Q8IXW5 612 aaPredicted RBP21.9■■□□□ 1.1
EFR3A-201ENST00000254624 NME9Q86XW9 330 aa21.9■■□□□ 1.1
EFR3A-201ENST00000254624 CEBPAP49715 358 aaPredicted RBP21.89■■□□□ 1.1
EFR3A-201ENST00000254624 ZSCAN25Q6NSZ9 544 aa21.89■■□□□ 1.1
EFR3A-201ENST00000254624 ANO8Q9HCE9 1232 aaPredicted RBP21.89■■□□□ 1.1
EFR3A-201ENST00000254624 NCBP3Q53F19 620 aaKnown RBP21.89■■□□□ 1.09
EFR3A-201ENST00000254624 MPHOSPH8Q99549 860 aa21.88■■□□□ 1.09
EFR3A-201ENST00000254624 A2MP01023 1474 aa21.88■■□□□ 1.09
EFR3A-201ENST00000254624 TTC21BQ7Z4L5 1316 aa21.87■■□□□ 1.09
EFR3A-201ENST00000254624 CCDC43Q96MW1 224 aaKnown RBP21.87■■□□□ 1.09
EFR3A-201ENST00000254624 CWC22Q9HCG8 908 aaKnown RBP21.87■■□□□ 1.09
EFR3A-201ENST00000254624 ALDH1L2Q3SY69 923 aa21.86■■□□□ 1.09
EFR3A-201ENST00000254624 KIAA0556O60303 1618 aa21.86■■□□□ 1.09
EFR3A-201ENST00000254624 PDCP20941 246 aa21.86■■□□□ 1.09
EFR3A-201ENST00000254624 SASS6Q6UVJ0 657 aa21.86■■□□□ 1.09
EFR3A-201ENST00000254624 NACAP1Q9BZK3 213 aa21.86■■□□□ 1.09
EFR3A-201ENST00000254624 TAF7Q15545 349 aaPredicted RBP21.86■■□□□ 1.09
EFR3A-201ENST00000254624 DUSP27Q5VZP5 1158 aa21.85■■□□□ 1.09
EFR3A-201ENST00000254624 SRGAP3O43295 1099 aa21.85■■□□□ 1.09
EFR3A-201ENST00000254624 TMOD3Q9NYL9 352 aa21.84■■□□□ 1.09
EFR3A-201ENST00000254624 CHD1LQ86WJ1 897 aa21.84■■□□□ 1.09
EFR3A-201ENST00000254624 SIL1Q9H173 461 aa21.84■■□□□ 1.09
EFR3A-201ENST00000254624 NEK4P51957 841 aa21.83■■□□□ 1.09
EFR3A-201ENST00000254624 CEP126Q9P2H0 1117 aa21.83■■□□□ 1.08
EFR3A-201ENST00000254624 SYCP2Q9BX26 1530 aa21.83■■□□□ 1.08
EFR3A-201ENST00000254624 IPO7O95373 1038 aaKnown RBP21.83■■□□□ 1.08
EFR3A-201ENST00000254624 CCDC184Q52MB2 194 aa21.83■■□□□ 1.08
EFR3A-201ENST00000254624 ANKRD1Q15327 319 aa21.82■■□□□ 1.08
EFR3A-201ENST00000254624 PCMTD1Q96MG8 357 aaPredicted RBP21.82■■□□□ 1.08
EFR3A-201ENST00000254624 FOSBP53539 338 aa21.81■■□□□ 1.08
EFR3A-201ENST00000254624 UHRF1BP1LA0JNW5 1464 aa21.81■■□□□ 1.08
EFR3A-201ENST00000254624 DCAF8L1A6NGE4 600 aa21.81■■□□□ 1.08
EFR3A-201ENST00000254624 FOXO3O43524 673 aa21.81■■□□□ 1.08
EFR3A-201ENST00000254624 MCM10Q7L590 875 aa21.81■■□□□ 1.08
EFR3A-201ENST00000254624 GOLGA6L1Q8N7Z2 621 aa21.81■■□□□ 1.08
EFR3A-201ENST00000254624 AACSQ86V21 672 aa21.81■■□□□ 1.08
EFR3A-201ENST00000254624 NUP160Q12769 1436 aa21.81■■□□□ 1.08
EFR3A-201ENST00000254624 ANKRD36BQ8N2N9 1353 aa21.81■■□□□ 1.08
EFR3A-201ENST00000254624 LARP1Q6PKG0 1096 aaKnown RBP21.81■■□□□ 1.08
EFR3A-201ENST00000254624 ZNF652Q9Y2D9 606 aa21.81■■□□□ 1.08
EFR3A-201ENST00000254624 EMILIN1Q9Y6C2 1016 aa21.8■■□□□ 1.08
EFR3A-201ENST00000254624 KRT28Q7Z3Y7 464 aa21.8■■□□□ 1.08
EFR3A-201ENST00000254624 CYP46A1Q9Y6A2 500 aa21.8■■□□□ 1.08
EFR3A-201ENST00000254624 CADPS2Q86UW7 1296 aa21.79■■□□□ 1.08
EFR3A-201ENST00000254624 C11orf95C9JLR9 678 aaPredicted RBP21.79■■□□□ 1.08
EFR3A-201ENST00000254624 IKQ13123 557 aaPredicted RBP21.79■■□□□ 1.08
EFR3A-201ENST00000254624 ABCC10Q5T3U5 1492 aa21.79■■□□□ 1.08
EFR3A-201ENST00000254624 IGHMBP2P38935 993 aaKnown RBP21.78■■□□□ 1.08
EFR3A-201ENST00000254624 NAT10Q9H0A0 1025 aaKnown RBP21.77■■□□□ 1.08
EFR3A-201ENST00000254624 TMEM57Q8N5G2 664 aa21.77■■□□□ 1.08
EFR3A-201ENST00000254624 NKTRP30414 1462 aaKnown RBP21.77■■□□□ 1.07
EFR3A-201ENST00000254624 RAB11FIP3O75154 756 aa21.77■■□□□ 1.07
EFR3A-201ENST00000254624 LETM1O95202 739 aaPredicted RBP21.76■■□□□ 1.07
EFR3A-201ENST00000254624 SAMD1Q6SPF0 538 aaPredicted RBP21.76■■□□□ 1.07
EFR3A-201ENST00000254624 TCOF1Q13428 1488 aaKnown RBP21.76■■□□□ 1.07
EFR3A-201ENST00000254624 RRP12Q5JTH9 1297 aaKnown RBP21.76■■□□□ 1.07
EFR3A-201ENST00000254624 ZNF396Q96N95 335 aaPredicted RBP21.76■■□□□ 1.07
EFR3A-201ENST00000254624 CTNNA3Q9UI47 895 aa21.76■■□□□ 1.07
EFR3A-201ENST00000254624 WDR62O43379 1518 aa21.76■■□□□ 1.07
EFR3A-201ENST00000254624 AMER1Q5JTC6 1135 aaPredicted RBP21.76■■□□□ 1.07
EFR3A-201ENST00000254624 CCDC70Q6NSX1 233 aa21.75■■□□□ 1.07
EFR3A-201ENST00000254624 OLFM4Q6UX06 510 aa21.75■■□□□ 1.07
EFR3A-201ENST00000254624 TTC21AQ8NDW8 1320 aa21.75■■□□□ 1.07
EFR3A-201ENST00000254624 A0A0U1RQG5 324 aaPredicted RBP21.75■■□□□ 1.07
EFR3A-201ENST00000254624 HSP90AB3PQ58FF7 597 aa21.74■■□□□ 1.07
EFR3A-201ENST00000254624 ACEP12821 1306 aa21.74■■□□□ 1.07
EFR3A-201ENST00000254624 MIS18AQ9NYP9 233 aa21.74■■□□□ 1.07
EFR3A-201ENST00000254624 AEBP1Q8IUX7 1158 aa21.74■■□□□ 1.07
EFR3A-201ENST00000254624 THUMPD2Q9BTF0 503 aaKnown RBP21.74■■□□□ 1.07
EFR3A-201ENST00000254624 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
EFR3A-201ENST00000254624 MBD3O95983 291 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms