RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 AIMP1Q12904 312 aaKnown RBP14.97□□□□□ -0.01
LIN28A-201ENST00000254231 ZNF530Q6P9A1 599 aaPredicted RBP14.97□□□□□ -0.01
LIN28A-201ENST00000254231 ZC3H13Q5T200 1668 aaKnown RBP14.97□□□□□ -0.01
LIN28A-201ENST00000254231 CEP170BQ9Y4F5 1589 aaPredicted RBP14.97□□□□□ -0.01
LIN28A-201ENST00000254231 CPS1P31327 1500 aa14.97□□□□□ -0.01
LIN28A-201ENST00000254231 FCHSD2O94868 740 aa14.97□□□□□ -0.01
LIN28A-201ENST00000254231 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
LIN28A-201ENST00000254231 IQGAP1P46940 1657 aa14.96□□□□□ -0.01
LIN28A-201ENST00000254231 RAPGEF4Q8WZA2 1011 aa14.96□□□□□ -0.01
LIN28A-201ENST00000254231 RSPH6AQ9H0K4 717 aa14.96□□□□□ -0.01
LIN28A-201ENST00000254231 PTCD1O75127 700 aaKnown RBP14.96□□□□□ -0.02
LIN28A-201ENST00000254231 SLC39A6Q13433 755 aa14.96□□□□□ -0.02
LIN28A-201ENST00000254231 TRIM35Q9UPQ4 493 aa14.96□□□□□ -0.02
LIN28A-201ENST00000254231 TEFQ10587 303 aa14.95□□□□□ -0.02
LIN28A-201ENST00000254231 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
LIN28A-201ENST00000254231 LMTK3Q96Q04 1460 aa14.95□□□□□ -0.02
LIN28A-201ENST00000254231 NFE2L2Q16236 605 aa14.94□□□□□ -0.02
LIN28A-201ENST00000254231 BRINP3Q76B58 766 aa14.94□□□□□ -0.02
LIN28A-201ENST00000254231 PNNQ9H307 717 aaKnown RBP14.94□□□□□ -0.02
LIN28A-201ENST00000254231 PDE3BQ13370 1112 aa14.94□□□□□ -0.02
LIN28A-201ENST00000254231 ERICH6Q7L0X2 663 aa14.94□□□□□ -0.02
LIN28A-201ENST00000254231 FANCIQ9NVI1 1328 aa14.94□□□□□ -0.02
LIN28A-201ENST00000254231 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
LIN28A-201ENST00000254231 C1orf141Q5JVX7 400 aa14.93□□□□□ -0.02
LIN28A-201ENST00000254231 C8orf58Q8NAV2 365 aa14.93□□□□□ -0.02
LIN28A-201ENST00000254231 NOB1Q9ULX3 412 aaKnown RBP14.93□□□□□ -0.02
LIN28A-201ENST00000254231 EDC4Q6P2E9 1401 aaKnown RBP14.93□□□□□ -0.02
LIN28A-201ENST00000254231 USP6P35125 1406 aa14.92□□□□□ -0.02
LIN28A-201ENST00000254231 FAM177BA6PVY3 158 aa14.92□□□□□ -0.02
LIN28A-201ENST00000254231 C8orf37Q96NL8 207 aa14.92□□□□□ -0.02
LIN28A-201ENST00000254231 JARID2Q92833 1246 aaPredicted RBP14.92□□□□□ -0.02
LIN28A-201ENST00000254231 MBIPQ9NS73 344 aa14.92□□□□□ -0.02
LIN28A-201ENST00000254231 POLR3AO14802 1390 aaPredicted RBP14.92□□□□□ -0.02
LIN28A-201ENST00000254231 F6X3S4 739 aa14.91□□□□□ -0.02
LIN28A-201ENST00000254231 UBR1Q8IWV7 1749 aa14.91□□□□□ -0.02
LIN28A-201ENST00000254231 TWISTNBQ3B726 338 aaPredicted RBP14.91□□□□□ -0.02
LIN28A-201ENST00000254231 CD163L1Q9NR16 1453 aa14.91□□□□□ -0.02
LIN28A-201ENST00000254231 RLBP1P12271 317 aa14.9□□□□□ -0.02
LIN28A-201ENST00000254231 KCNQ4P56696 695 aa14.9□□□□□ -0.02
LIN28A-201ENST00000254231 ARHGEF28Q8N1W1 1705 aaKnown RBP14.9□□□□□ -0.02
LIN28A-201ENST00000254231 ATP7BP35670 1465 aa14.9□□□□□ -0.02
LIN28A-201ENST00000254231 KCNQ3O43525 872 aa14.9□□□□□ -0.02
LIN28A-201ENST00000254231 NPHP3Q7Z494 1330 aa14.9□□□□□ -0.02
LIN28A-201ENST00000254231 MEX3CQ5U5Q3 659 aaKnown RBP14.89□□□□□ -0.03
LIN28A-201ENST00000254231 SIRT1Q96EB6 747 aa14.89□□□□□ -0.03
LIN28A-201ENST00000254231 PUS7Q96PZ0 661 aaKnown RBP14.89□□□□□ -0.03
LIN28A-201ENST00000254231 FAM135BQ49AJ0 1406 aa14.89□□□□□ -0.03
LIN28A-201ENST00000254231 NKTRP30414 1462 aaKnown RBP14.89□□□□□ -0.03
LIN28A-201ENST00000254231 SETBP1Q9Y6X0 1596 aa14.89□□□□□ -0.03
LIN28A-201ENST00000254231 ACSBG1Q96GR2 724 aa14.89□□□□□ -0.03
LIN28A-201ENST00000254231 BTG4Q9NY30 223 aa14.89□□□□□ -0.03
LIN28A-201ENST00000254231 PLEKHF1Q96S99 279 aa14.89□□□□□ -0.03
LIN28A-201ENST00000254231 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
LIN28A-201ENST00000254231 MYL6BP14649 208 aa14.88□□□□□ -0.03
LIN28A-201ENST00000254231 RARSP54136 660 aaKnown RBP14.88□□□□□ -0.03
LIN28A-201ENST00000254231 REREQ9P2R6 1566 aa14.87□□□□□ -0.03
LIN28A-201ENST00000254231 KCNH5Q8NCM2 988 aa14.87□□□□□ -0.03
LIN28A-201ENST00000254231 NINLQ9Y2I6 1382 aa14.87□□□□□ -0.03
LIN28A-201ENST00000254231 SMG6Q86US8 1419 aaKnown RBP14.86□□□□□ -0.03
LIN28A-201ENST00000254231 TTC21AQ8NDW8 1320 aa14.86□□□□□ -0.03
LIN28A-201ENST00000254231 NGLY1Q96IV0 654 aa14.86□□□□□ -0.03
LIN28A-201ENST00000254231 EP400Q96L91 3159 aa14.86□□□□□ -0.03
LIN28A-201ENST00000254231 KIAA0232Q92628 1395 aa14.86□□□□□ -0.03
LIN28A-201ENST00000254231 FKBP5Q13451 457 aaPredicted RBP14.86□□□□□ -0.03
LIN28A-201ENST00000254231 LARP1Q6PKG0 1096 aaKnown RBP14.85□□□□□ -0.03
LIN28A-201ENST00000254231 PRAMEF22A3QJZ6 481 aa14.85□□□□□ -0.03
LIN28A-201ENST00000254231 GNAT3A8MTJ3 354 aa14.85□□□□□ -0.03
LIN28A-201ENST00000254231 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
LIN28A-201ENST00000254231 IFT172Q9UG01 1749 aa14.85□□□□□ -0.03
LIN28A-201ENST00000254231 GNAI1P63096 354 aa14.85□□□□□ -0.03
LIN28A-201ENST00000254231 NSD2O96028 1365 aa14.84□□□□□ -0.03
LIN28A-201ENST00000254231 MYO3AQ8NEV4 1616 aa14.84□□□□□ -0.03
LIN28A-201ENST00000254231 NFATC2IPQ8NCF5 419 aa14.84□□□□□ -0.03
LIN28A-201ENST00000254231 IP6K1Q92551 441 aa14.84□□□□□ -0.03
LIN28A-201ENST00000254231 CCDC85AQ96PX6 553 aaPredicted RBP14.84□□□□□ -0.03
LIN28A-201ENST00000254231 CPSF1Q10570 1443 aaKnown RBP14.84□□□□□ -0.03
LIN28A-201ENST00000254231 FLT4P35916 1363 aa14.84□□□□□ -0.03
LIN28A-201ENST00000254231 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.83□□□□□ -0.03
LIN28A-201ENST00000254231 ZKSCAN2Q63HK3 967 aa14.83□□□□□ -0.03
LIN28A-201ENST00000254231 NPC1L1Q9UHC9 1359 aa14.83□□□□□ -0.04
LIN28A-201ENST00000254231 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.04
LIN28A-201ENST00000254231 ADGRL3Q9HAR2 1447 aa14.83□□□□□ -0.04
LIN28A-201ENST00000254231 BTBD11A6QL63 1104 aa14.82□□□□□ -0.04
LIN28A-201ENST00000254231 TATP17735 454 aaPredicted RBP14.82□□□□□ -0.04
LIN28A-201ENST00000254231 TMEM57Q8N5G2 664 aa14.82□□□□□ -0.04
LIN28A-201ENST00000254231 WDR63Q8IWG1 891 aa14.82□□□□□ -0.04
LIN28A-201ENST00000254231 IL17REQ8NFR9 667 aa14.82□□□□□ -0.04
LIN28A-201ENST00000254231 STK31Q9BXU1 1019 aa14.82□□□□□ -0.04
LIN28A-201ENST00000254231 NRXN3Q9Y4C0 1643 aa14.82□□□□□ -0.04
LIN28A-201ENST00000254231 SMIM5Q71RC9 77 aa14.82□□□□□ -0.04
LIN28A-201ENST00000254231 ARHGEF25Q86VW2 580 aa14.82□□□□□ -0.04
LIN28A-201ENST00000254231 PLEKHO1Q53GL0 409 aaPredicted RBP14.81□□□□□ -0.04
LIN28A-201ENST00000254231 TSHZ2Q9NRE2 1034 aa14.81□□□□□ -0.04
LIN28A-201ENST00000254231 TRIM27P14373 513 aa14.81□□□□□ -0.04
LIN28A-201ENST00000254231 LMOD3Q0VAK6 560 aa14.81□□□□□ -0.04
LIN28A-201ENST00000254231 G2E3Q7L622 706 aa14.81□□□□□ -0.04
LIN28A-201ENST00000254231 WWC3Q9ULE0 1092 aa14.81□□□□□ -0.04
LIN28A-201ENST00000254231 ARHGAP23Q9P227 1491 aa14.81□□□□□ -0.04
LIN28A-201ENST00000254231 GAS2L2Q8NHY3 880 aa14.8□□□□□ -0.04
LIN28A-201ENST00000254231 HDGFL1Q5TGJ6 251 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms